Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18160

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,912,648	+		DZA65_RS18155	0.70	+0.5
3,912,859	-		DZA65_RS18155	0.78	-0.9
3,912,915	+		DZA65_RS18155	0.80	+1.3
3,912,942	+		DZA65_RS18155	0.81	+1.1
3,912,942	+		DZA65_RS18155	0.81	+0.1
3,912,942	+		DZA65_RS18155	0.81	+0.1
3,912,943	-		DZA65_RS18155	0.81	+0.8
3,912,943	-		DZA65_RS18155	0.81	-1.9
3,913,018	+		DZA65_RS18155	0.83	+2.4
3,913,018	+		DZA65_RS18155	0.83	+0.1
3,913,018	+		DZA65_RS18155	0.83	-0.3
3,913,018	+		DZA65_RS18155	0.83	+1.1
3,913,018	+		DZA65_RS18155	0.83	-1.2
3,913,018	+		DZA65_RS18155	0.83	-0.5
3,913,019	-		DZA65_RS18155	0.83	-1.2
3,913,019	-		DZA65_RS18155	0.83	+1.6
3,913,019	-		DZA65_RS18155	0.83	-0.3
3,913,019	-		DZA65_RS18155	0.83	-1.0
3,913,019	-		DZA65_RS18155	0.83	-0.5
3,913,077	+		DZA65_RS18155	0.85	-0.8
3,913,077	+		DZA65_RS18155	0.85	-1.1
3,913,077	+		DZA65_RS18155	0.85	+0.2
3,913,077	+		DZA65_RS18155	0.85	+0.0
3,913,077	+		DZA65_RS18155	0.85	+0.5
3,913,077	+		DZA65_RS18155	0.85	-0.2
3,913,078	-		DZA65_RS18155	0.85	-2.4
3,913,078	-		DZA65_RS18155	0.85	+1.2
3,913,078	-		DZA65_RS18155	0.85	+0.2
3,913,177	-		DZA65_RS18155	0.89	+0.8
3,913,206	+				-0.2
3,913,206	+				-0.1
3,913,207	-				-0.4
3,913,207	-				+0.1
3,913,207	-				+1.2
3,913,207	-				-1.2
3,913,244	+				-0.4
3,913,245	-				-0.5
3,913,278	+				-0.5
3,913,279	-				-0.2
3,913,279	-				-0.1
3,913,318	+				-1.2
3,913,318	+				+0.2
3,913,318	+				-0.2
3,913,318	+				-1.1
3,913,318	+				-0.7
3,913,318	+				-1.4
3,913,318	+				+0.9
3,913,319	-				-0.3
3,913,319	-				-0.2
3,913,319	-				+0.2
3,913,319	-				-0.8
3,913,319	-				-0.2
3,913,319	-				-0.3
3,913,320	+				+0.0
3,913,355	-				-0.4
3,913,374	+				+0.2
3,913,439	+				-1.3
3,913,439	+				-0.8
3,913,439	+				+0.2
3,913,439	+				-0.2
3,913,439	+				-0.6
3,913,440	-				-0.8
3,913,440	-				+0.7
3,913,552	+				-0.8
3,914,342	+		DZA65_RS18160	0.66	+0.8
3,914,343	-		DZA65_RS18160	0.66	-1.4
3,914,396	-		DZA65_RS18160	0.71	-0.9
3,914,721	+				-0.3
3,914,729	+				+0.7
3,914,769	-				-0.6
3,914,769	-				+1.1
3,914,780	-				-0.4
3,914,797	+				-0.6
3,914,798	-				-0.0
3,914,798	-				+0.6
3,914,815	-				-1.6
3,914,815	-				-0.8
3,914,920	-				+0.4
3,915,006	-				-0.7
3,915,009	+				-0.1
3,915,009	+				-2.5
3,915,009	+				-1.4
3,915,010	-				+0.3
3,915,042	+				-0.6
3,915,043	-				-0.2
3,915,045	+				+0.5
3,915,045	+				+0.2
3,915,046	-				-0.5
3,915,157	+		DZA65_RS18165	0.17	+0.9
3,915,158	-		DZA65_RS18165	0.17	-1.1
3,915,158	-		DZA65_RS18165	0.17	-0.1
3,915,158	-		DZA65_RS18165	0.17	-0.5
3,915,288	+		DZA65_RS18165	0.32	-0.7
3,915,288	+		DZA65_RS18165	0.32	-0.2
3,915,289	-		DZA65_RS18165	0.32	-1.4
3,915,289	-		DZA65_RS18165	0.32	-0.6
3,915,289	-		DZA65_RS18165	0.32	-0.8
3,915,289	-		DZA65_RS18165	0.32	+1.0
3,915,289	-		DZA65_RS18165	0.32	+1.8
3,915,388	+		DZA65_RS18165	0.43	-0.9
3,915,388	+		DZA65_RS18165	0.43	-1.6
3,915,419	+		DZA65_RS18165	0.46	+0.8
3,915,420	-		DZA65_RS18165	0.47	-1.5
3,915,420	-		DZA65_RS18165	0.47	-0.8
3,915,453	+		DZA65_RS18165	0.50	+1.4
3,915,453	+		DZA65_RS18165	0.50	-0.3
3,915,453	+		DZA65_RS18165	0.50	-1.6
3,915,453	+		DZA65_RS18165	0.50	-0.2
3,915,453	+		DZA65_RS18165	0.50	+0.6
3,915,454	-		DZA65_RS18165	0.50	-0.6
3,915,454	-		DZA65_RS18165	0.50	-0.1
3,915,454	-		DZA65_RS18165	0.50	-0.2
3,915,454	-		DZA65_RS18165	0.50	-0.9
3,915,457	+		DZA65_RS18165	0.51	+1.9
3,915,457	+		DZA65_RS18165	0.51	+0.5
3,915,457	+		DZA65_RS18165	0.51	+0.2
3,915,457	+		DZA65_RS18165	0.51	+0.8
3,915,457	+		DZA65_RS18165	0.51	-0.5
3,915,458	-		DZA65_RS18165	0.51	+0.8
3,915,458	-				+0.4
3,915,458	-		DZA65_RS18165	0.51	-0.1
3,915,458	-		DZA65_RS18165	0.51	-0.9
3,915,502	+		DZA65_RS18165	0.56	+1.1
3,915,502	+		DZA65_RS18165	0.56	-0.1
3,915,620	+		DZA65_RS18165	0.69	+0.1
3,915,620	+		DZA65_RS18165	0.69	+0.4
3,915,621	-		DZA65_RS18165	0.69	+0.5
3,915,671	+		DZA65_RS18165	0.75	-1.1
3,915,671	+		DZA65_RS18165	0.75	+0.7
3,915,671	+		DZA65_RS18165	0.75	-0.9
3,915,709	+		DZA65_RS18165	0.79	-1.1
3,915,709	+		DZA65_RS18165	0.79	-0.5
3,915,710	-		DZA65_RS18165	0.79	+0.1
3,915,710	-		DZA65_RS18165	0.79	+0.2
3,915,710	-		DZA65_RS18165	0.79	+0.1
3,915,710	-		DZA65_RS18165	0.79	+0.9
3,915,710	-		DZA65_RS18165	0.79	+0.7