Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17865

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,842,929	-				+0.2
3,843,081	+		DZA65_RS17860	0.23	+1.4
3,843,178	+		DZA65_RS17860	0.36	-0.6
3,843,178	+		DZA65_RS17860	0.36	+0.1
3,843,179	-		DZA65_RS17860	0.36	+0.1
3,843,607	-				-0.2
3,843,648	+				-1.3
3,843,648	+				-0.7
3,843,649	-				-0.4
3,843,650	+				-0.2
3,843,650	+				-0.6
3,843,650	+				-0.4
3,843,650	+				-0.5
3,843,650	+				+1.2
3,843,651	-				+0.1
3,843,651	-				-2.9
3,843,651	-				-0.6
3,843,651	-				+0.4
3,843,651	-				-1.4
3,843,651	-				+0.7
3,843,651	-				-1.2
3,843,651	-				+0.6
3,843,651	-				+1.0
3,843,654	+				+0.1
3,843,784	+				+0.4
3,843,785	-				+0.5
3,843,860	-				-0.4
3,843,902	+				+0.1
3,843,902	+				-2.1
3,843,902	+				-0.0
3,843,902	+				-1.1
3,843,903	-				-0.2
3,843,903	-				-1.2
3,843,903	-				-1.5
3,843,919	+				+0.7
3,843,920	-				-0.4
3,843,920	-				-0.0
3,843,920	-				-0.5
3,843,950	+				-0.9
3,843,950	+				+0.2
3,843,950	+				+1.2
3,843,950	+				-2.1
3,843,950	+				-1.5
3,843,950	+				+1.4
3,843,950	+				-0.8
3,843,950	+				+0.5
3,843,950	+				+0.5
3,843,951	-				+0.5
3,843,951	-				-2.5
3,843,951	-				-0.8
3,843,951	-				-1.5
3,843,951	-				+1.0
3,843,951	-				+0.2
3,843,951	-				+1.4
3,843,968	-		DZA65_RS17865	0.10	-0.2
3,843,991	-		DZA65_RS17865	0.12	+0.1
3,844,006	-		DZA65_RS17865	0.13	-0.9
3,844,016	+		DZA65_RS17865	0.13	-0.2
3,844,016	+		DZA65_RS17865	0.13	+0.2
3,844,016	+		DZA65_RS17865	0.13	+0.4
3,844,098	-		DZA65_RS17865	0.19	-0.0
3,844,102	+		DZA65_RS17865	0.19	+0.1
3,844,193	+		DZA65_RS17865	0.25	+0.4
3,844,193	+		DZA65_RS17865	0.25	-0.2
3,844,194	-		DZA65_RS17865	0.25	-0.8
3,844,194	-		DZA65_RS17865	0.25	-0.6
3,844,194	-		DZA65_RS17865	0.25	-1.6
3,844,194	-		DZA65_RS17865	0.25	-0.1
3,844,194	-		DZA65_RS17865	0.25	-0.2
3,844,194	-		DZA65_RS17865	0.25	-1.1
3,844,194	-		DZA65_RS17865	0.25	-0.2
3,844,201	+		DZA65_RS17865	0.26	-0.9
3,844,201	+		DZA65_RS17865	0.26	+0.4
3,844,201	+		DZA65_RS17865	0.26	-1.2
3,844,201	+		DZA65_RS17865	0.26	-1.0
3,844,201	+		DZA65_RS17865	0.26	+0.4
3,844,201	+		DZA65_RS17865	0.26	+0.4
3,844,201	+		DZA65_RS17865	0.26	-0.8
3,844,202	-		DZA65_RS17865	0.26	-0.6
3,844,202	-		DZA65_RS17865	0.26	+0.5
3,844,202	-		DZA65_RS17865	0.26	-0.8
3,844,202	-		DZA65_RS17865	0.26	-3.1
3,844,400	-		DZA65_RS17865	0.39	+0.8
3,844,400	-		DZA65_RS17865	0.39	+0.1
3,844,400	-		DZA65_RS17865	0.39	-2.4
3,844,400	-		DZA65_RS17865	0.39	-0.9
3,844,434	-		DZA65_RS17865	0.42	-0.7
3,844,434	-				+0.1
3,844,456	-		DZA65_RS17865	0.43	-0.9
3,844,456	-		DZA65_RS17865	0.43	+1.3
3,844,540	+		DZA65_RS17865	0.49	-1.2
3,844,540	+		DZA65_RS17865	0.49	-0.6
3,844,540	+		DZA65_RS17865	0.49	-0.7
3,844,540	+		DZA65_RS17865	0.49	-0.6
3,844,541	-		DZA65_RS17865	0.49	-0.6
3,844,587	+		DZA65_RS17865	0.52	-0.7
3,844,588	-		DZA65_RS17865	0.52	-1.8
3,844,588	-		DZA65_RS17865	0.52	+0.7
3,844,628	+		DZA65_RS17865	0.55	+0.5
3,844,629	-		DZA65_RS17865	0.55	+0.7
3,844,670	+		DZA65_RS17865	0.57	-1.2
3,844,670	+		DZA65_RS17865	0.57	-0.5
3,844,670	+		DZA65_RS17865	0.57	-0.4
3,844,670	+		DZA65_RS17865	0.57	-0.7
3,844,671	-		DZA65_RS17865	0.58	-0.7
3,844,949	-		DZA65_RS17865	0.76	+1.4
3,844,949	-		DZA65_RS17865	0.76	-0.8
3,845,012	-		DZA65_RS17865	0.80	-0.6
3,845,012	-		DZA65_RS17865	0.80	+0.6
3,845,012	-		DZA65_RS17865	0.80	-0.6
3,845,175	-				-0.5
3,845,175	-				+0.8
3,845,175	-				-0.0
3,845,221	+				-2.2
3,845,222	-				+1.0
3,845,228	-				-0.2
3,845,271	+				+0.2
3,845,271	+				-0.6
3,845,271	+				-1.8
3,845,271	+				+0.5
3,845,271	+				-2.1
3,845,271	+				+1.4
3,845,300	-				+1.1
3,845,514	+				+0.2
3,845,514	+				+1.4
3,845,514	+				-0.1
3,845,514	+				-1.1
3,845,514	+				+2.4
3,845,514	+				-0.4
3,845,514	+				-0.2
3,845,514	+				-0.2
3,845,514	+				-1.2
3,845,514	+				-0.6
3,845,515	-				-1.1
3,845,515	-				-0.9
3,845,515	-				+0.3
3,845,515	-				+0.8
3,845,515	-				-0.7
3,845,515	-				+1.0
3,845,515	-				-0.5
3,845,515	-				+0.8
3,845,515	-				-0.4
3,845,515	-				-0.7
3,845,515	-				-0.3
3,845,515	-				-1.4
3,845,515	-				+0.3
3,845,515	-				-0.4
3,845,515	-				-0.4
3,845,515	-				+0.1
3,845,515	-				-1.3
3,845,515	-				-0.2
3,845,515	-				+0.6
3,845,515	-				-0.1
3,845,515	-				+0.4
3,845,515	-				-0.4
3,845,516	+				-0.4
3,845,554	+				-1.4
3,845,554	+				-0.2
3,845,554	+				-1.6
3,845,554	+				+0.5
3,845,554	+				-1.2
3,845,554	+				-1.2
3,845,554	+				+1.2
3,845,554	+				-0.5
3,845,554	+				-0.9
3,845,555	-				-1.4
3,845,555	-				-1.1
3,845,555	-				-0.8
3,845,555	-				-1.5
3,845,555	-				-0.3
3,845,555	-				-0.2
3,845,555	-				-0.2
3,845,555	-				+1.4
3,845,555	-				-0.1
3,845,556	+				+0.6
3,845,556	+				-1.5
3,845,556	+				+0.2
3,845,557	-				+0.2
3,845,625	-				+0.2
3,845,625	-				-0.7
3,845,645	+				+0.6
3,845,645	+				-1.5
3,845,646	-				-1.0
3,845,671	+				-0.2
3,845,671	+				-0.4
3,845,671	+				+0.4
3,845,671	+				-0.5
3,845,672	-				-0.1
3,845,672	-				-0.6
3,845,693	+				-0.6
3,845,694	-				-0.8
3,845,714	+				-0.0
3,845,714	+				-0.9
3,845,714	+				+0.4
3,845,715	-				-0.2
3,845,823	+		DZA65_RS17870	0.16	+0.4
3,845,823	+		DZA65_RS17870	0.16	-0.0
3,845,823	+		DZA65_RS17870	0.16	-0.9
3,845,823	+		DZA65_RS17870	0.16	-0.6
3,845,824	-		DZA65_RS17870	0.16	-0.8
3,845,824	-		DZA65_RS17870	0.16	-0.4
3,845,824	-		DZA65_RS17870	0.16	+0.6
3,845,827	+		DZA65_RS17870	0.16	-2.0
3,845,827	+		DZA65_RS17870	0.16	-0.1
3,845,827	+		DZA65_RS17870	0.16	-0.1
3,845,828	-		DZA65_RS17870	0.16	+0.2
3,845,828	-		DZA65_RS17870	0.16	+0.3
3,845,828	-		DZA65_RS17870	0.16	-0.6
3,845,828	-		DZA65_RS17870	0.16	-2.0
3,845,968	-		DZA65_RS17870	0.24	-0.9
3,845,978	-		DZA65_RS17870	0.25	-0.4
3,846,087	+		DZA65_RS17870	0.31	-0.4
3,846,088	-		DZA65_RS17870	0.31	-0.9
3,846,247	+		DZA65_RS17870	0.39	-0.6
3,846,270	+		DZA65_RS17870	0.41	+1.6
3,846,271	+		DZA65_RS17870	0.41	+0.2