Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,770,628	-				-0.3
3,770,628	-				-0.3
3,770,655	-				-1.0
3,770,681	+		DZA65_RS17500	0.11	-0.4
3,770,681	+		DZA65_RS17500	0.11	+0.1
3,770,682	-		DZA65_RS17500	0.11	+0.3
3,770,682	-		DZA65_RS17500	0.11	+1.3
3,770,682	-		DZA65_RS17500	0.11	-0.8
3,770,721	-		DZA65_RS17500	0.15	+0.2
3,770,754	+		DZA65_RS17500	0.18	+0.1
3,770,848	-		DZA65_RS17500	0.27	-0.4
3,770,848	-		DZA65_RS17500	0.27	-1.2
3,770,880	+		DZA65_RS17500	0.30	-0.2
3,770,893	+		DZA65_RS17500	0.31	-0.2
3,770,958	+		DZA65_RS17500	0.37	-0.2
3,771,008	+		DZA65_RS17500	0.42	-0.2
3,771,008	+		DZA65_RS17500	0.42	-0.5
3,771,009	-		DZA65_RS17500	0.42	-1.0
3,771,009	-		DZA65_RS17500	0.42	+0.6
3,771,009	-		DZA65_RS17500	0.42	-0.2
3,771,027	+		DZA65_RS17500	0.44	+1.0
3,771,028	-				+0.6
3,771,109	+		DZA65_RS17500	0.52	-0.7
3,771,109	+		DZA65_RS17500	0.52	-0.5
3,771,109	+		DZA65_RS17500	0.52	+0.1
3,771,109	+		DZA65_RS17500	0.52	-0.1
3,771,109	+		DZA65_RS17500	0.52	+0.3
3,771,210	+		DZA65_RS17500	0.62	-0.6
3,771,211	-		DZA65_RS17500	0.62	-0.3
3,771,211	-		DZA65_RS17500	0.62	+0.0
3,771,268	+		DZA65_RS17500	0.67	-0.3
3,771,268	+		DZA65_RS17500	0.67	-2.0
3,771,268	+		DZA65_RS17500	0.67	-1.6
3,771,268	+		DZA65_RS17500	0.67	+0.7
3,771,268	+		DZA65_RS17500	0.67	-0.0
3,771,268	+		DZA65_RS17500	0.67	+0.1
3,771,269	-		DZA65_RS17500	0.67	+0.1
3,771,269	-		DZA65_RS17500	0.67	+0.3
3,771,269	-		DZA65_RS17500	0.67	+0.3
3,771,269	-		DZA65_RS17500	0.67	-1.2
3,771,269	-		DZA65_RS17500	0.67	-0.5
3,771,269	-		DZA65_RS17500	0.67	+0.1
3,771,269	-		DZA65_RS17500	0.67	+1.0
3,771,269	-		DZA65_RS17500	0.67	+0.0
3,771,269	-		DZA65_RS17500	0.67	+0.8
3,771,269	-		DZA65_RS17500	0.67	-0.7
3,771,269	-		DZA65_RS17500	0.67	-1.5
3,771,269	-		DZA65_RS17500	0.67	-2.2
3,771,269	-		DZA65_RS17500	0.67	-0.2
3,771,420	+		DZA65_RS17500	0.82	-0.1
3,771,420	+		DZA65_RS17500	0.82	-0.2
3,771,421	-		DZA65_RS17500	0.82	-0.4
3,771,575	+				-1.0
3,771,575	+				-0.5
3,771,575	+				-0.6
3,771,575	+				+0.2
3,771,576	-				+0.0
3,771,597	+				-0.4
3,771,597	+				-1.2
3,771,597	+				-0.5
3,771,598	-				-1.5
3,771,604	+				-0.9
3,771,604	+				-0.4
3,771,604	+				+1.7
3,771,604	+				+0.8
3,771,605	-				-1.3
3,771,647	+				+0.4
3,771,647	+				+0.0
3,771,647	+				+0.1
3,771,647	+				-0.7
3,771,855	+		DZA65_RS17505	0.26	+0.1
3,771,883	-		DZA65_RS17505	0.29	+0.6
3,771,943	+		DZA65_RS17505	0.35	-0.1
3,771,944	-		DZA65_RS17505	0.35	-0.3
3,771,944	-		DZA65_RS17505	0.35	+0.3
3,771,986	+		DZA65_RS17505	0.40	-1.2
3,771,986	+		DZA65_RS17505	0.40	-0.3
3,771,986	+		DZA65_RS17505	0.40	-0.8
3,771,986	+		DZA65_RS17505	0.40	-0.5
3,771,986	+		DZA65_RS17505	0.40	+0.1
3,771,987	-		DZA65_RS17505	0.40	+1.1
3,771,987	-		DZA65_RS17505	0.40	+0.2
3,772,012	+		DZA65_RS17505	0.42	-0.5
3,772,028	+		DZA65_RS17505	0.44	+1.0
3,772,028	+		DZA65_RS17505	0.44	+0.6
3,772,029	-		DZA65_RS17505	0.44	+1.0
3,772,029	-		DZA65_RS17505	0.44	+0.6
3,772,029	-		DZA65_RS17505	0.44	-0.2
3,772,029	-		DZA65_RS17505	0.44	+0.7
3,772,029	-		DZA65_RS17505	0.44	-0.2
3,772,160	+		DZA65_RS17505	0.57	-0.3
3,772,161	-		DZA65_RS17505	0.57	-1.4
3,772,161	-		DZA65_RS17505	0.57	-0.4
3,772,232	+		DZA65_RS17505	0.64	+1.8
3,772,232	+		DZA65_RS17505	0.64	+0.7
3,772,232	+		DZA65_RS17505	0.64	+0.1
3,772,232	+		DZA65_RS17505	0.64	-0.1
3,772,232	+		DZA65_RS17505	0.64	+0.7
3,772,232	+		DZA65_RS17505	0.64	+0.7
3,772,232	+		DZA65_RS17505	0.64	-0.0
3,772,233	-		DZA65_RS17505	0.64	-0.4
3,772,233	-		DZA65_RS17505	0.64	+0.4
3,772,233	-		DZA65_RS17505	0.64	-1.2
3,772,233	-		DZA65_RS17505	0.64	-1.8
3,772,233	-		DZA65_RS17505	0.64	+0.3
3,772,233	-		DZA65_RS17505	0.64	-0.4
3,772,233	-		DZA65_RS17505	0.64	+0.1
3,772,233	-		DZA65_RS17505	0.64	+0.4
3,772,233	-		DZA65_RS17505	0.64	-0.3
3,772,233	-		DZA65_RS17505	0.64	+0.9
3,772,283	+		DZA65_RS17505	0.69	+0.6
3,772,283	+		DZA65_RS17505	0.69	+0.8
3,772,283	+		DZA65_RS17505	0.69	+0.6
3,772,284	-		DZA65_RS17505	0.70	-1.5
3,772,284	-		DZA65_RS17505	0.70	-0.8
3,772,284	-		DZA65_RS17505	0.70	-0.0
3,772,284	-		DZA65_RS17505	0.70	-0.5
3,772,433	+		DZA65_RS17505	0.85	-1.0
3,772,433	+		DZA65_RS17505	0.85	-1.2
3,772,433	+		DZA65_RS17505	0.85	+0.4
3,772,433	+		DZA65_RS17505	0.85	-0.4
3,772,433	+		DZA65_RS17505	0.85	-0.2
3,772,434	-		DZA65_RS17505	0.85	-1.8
3,772,434	-		DZA65_RS17505	0.85	+0.2
3,772,434	-		DZA65_RS17505	0.85	+1.8
3,772,434	-		DZA65_RS17505	0.85	+0.8
3,772,434	-		DZA65_RS17505	0.85	+0.1
3,772,434	-		DZA65_RS17505	0.85	-0.5
3,772,434	-		DZA65_RS17505	0.85	-0.4
3,772,434	-		DZA65_RS17505	0.85	+0.9
3,772,438	+		DZA65_RS17505	0.85	-1.4
3,772,439	-		DZA65_RS17505	0.85	-0.3
3,772,439	-		DZA65_RS17505	0.85	-0.4
3,772,614	+				-0.0
3,772,614	+				-0.9
3,772,614	+				-0.4
3,772,614	+				-0.2
3,772,614	+				-0.2
3,772,614	+				+1.0
3,772,614	+				-0.8
3,772,614	+				+0.6
3,772,614	+				-1.5
3,772,614	+				-0.5
3,772,615	-				+0.1
3,772,615	-				+0.0
3,772,615	-				+0.2
3,772,615	-				+0.4
3,772,615	-				-1.2
3,772,615	-				-0.2
3,772,615	-				-0.7
3,772,615	-				-0.3
3,772,645	-				+0.1
3,772,645	-				+0.1
3,772,653	-				-0.9
3,772,661	-				-2.0
3,772,661	-				+0.4
3,772,681	+				+0.7
3,772,730	+				-0.7
3,772,730	+				-0.5
3,772,730	+				-0.5
3,772,730	+				-0.2
3,772,731	-				-0.2
3,772,731	-				+1.1
3,772,731	-				-0.1
3,772,736	+				-1.0
3,772,736	+				+0.3
3,772,736	+				-1.2
3,772,736	+				-1.0
3,772,736	+				-0.1
3,772,736	+				+0.2
3,772,736	+				-0.2
3,772,737	-				+0.6
3,772,737	-				-0.2
3,772,737	-				-0.2
3,772,737	-				+1.2
3,772,737	-				+1.3
3,772,737	-				+0.1
3,772,737	-				+0.0
3,772,747	-				-1.0
3,772,747	-				+0.3
3,772,791	+				+0.1
3,772,791	+				+1.7
3,772,791	+				+0.1
3,772,792	-				-2.0
3,772,792	-				+0.3
3,772,852	+				-0.2
3,772,852	+				+0.2
3,772,852	+				-1.0
3,772,853	-				-1.5
3,772,853	-				+0.2
3,772,853	-				+1.1
3,772,853	-				-2.0
3,772,853	-				-0.7
3,772,867	+				-1.5
3,772,867	+				+0.3
3,772,867	+				-0.9
3,772,952	+				-0.1
3,772,952	+				-0.2
3,772,952	+				+0.3
3,772,953	-				-0.5
3,772,953	-				-1.5
3,772,959	+				+0.1
3,772,959	+				+0.5
3,772,959	+				-1.5
3,772,960	-				-0.7
3,773,005	+				-0.5
3,773,005	+				-0.9
3,773,005	+				-0.0
3,773,005	+				+0.3
3,773,005	+				-0.7
3,773,005	+				+1.3
3,773,005	+				-0.1
3,773,005	+				+0.3
3,773,006	-				+0.3
3,773,006	-				-1.8
3,773,006	-				-0.5
3,773,006	-				+0.9
3,773,033	+				+0.0
3,773,034	-				+0.4
3,773,034	-				-0.2
3,773,136	+		DZA65_RS17510	0.11	+0.3
3,773,152	+		DZA65_RS17510	0.12	-0.4
3,773,153	-		DZA65_RS17510	0.12	-0.3
3,773,153	-		DZA65_RS17510	0.12	-1.7
3,773,153	-		DZA65_RS17510	0.12	+0.3
3,773,177	-		DZA65_RS17510	0.14	-0.1
3,773,212	+		DZA65_RS17510	0.17	-0.8
3,773,257	+		DZA65_RS17510	0.20	-0.5
3,773,257	+		DZA65_RS17510	0.20	-0.4
3,773,257	+		DZA65_RS17510	0.20	+0.3
3,773,258	-		DZA65_RS17510	0.20	-0.1
3,773,282	+				+1.3
3,773,282	+		DZA65_RS17510	0.21	+0.0
3,773,282	+		DZA65_RS17510	0.21	+0.8
3,773,282	+		DZA65_RS17510	0.21	+0.7
3,773,282	+		DZA65_RS17510	0.21	-0.0
3,773,283	-		DZA65_RS17510	0.22	+0.2
3,773,283	-		DZA65_RS17510	0.22	+1.0
3,773,283	-		DZA65_RS17510	0.22	-0.2