Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17050

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,677,379	+				+0.0
3,677,408	-				-0.5
3,677,646	+		DZA65_RS17045	0.40	+0.3
3,677,646	+		DZA65_RS17045	0.40	+0.2
3,677,736	-		DZA65_RS17045	0.55	-0.1
3,677,808	+		DZA65_RS17045	0.66	-1.8
3,677,809	-		DZA65_RS17045	0.67	+0.1
3,677,812	+		DZA65_RS17045	0.67	+0.7
3,677,813	-		DZA65_RS17045	0.67	-1.2
3,677,882	+		DZA65_RS17045	0.78	-1.8
3,677,915	-		DZA65_RS17045	0.84	-0.5
3,677,915	-		DZA65_RS17045	0.84	+0.3
3,677,933	+		DZA65_RS17045	0.87	-0.7
3,677,976	-				+0.0
3,678,017	+				-0.7
3,678,017	+				-1.3
3,678,018	-				-0.9
3,678,048	+				-1.3
3,678,049	-				+1.0
3,678,302	+				-0.1
3,678,303	-				-1.0
3,678,307	+		DZA65_RS17050	0.10	+0.3
3,678,317	+		DZA65_RS17050	0.10	+0.3
3,678,318	-		DZA65_RS17050	0.10	-0.3
3,678,398	+		DZA65_RS17050	0.14	-0.1
3,678,589	+		DZA65_RS17050	0.21	-1.0
3,678,637	-		DZA65_RS17050	0.23	-0.3
3,678,673	+		DZA65_RS17050	0.24	+0.6
3,678,673	+		DZA65_RS17050	0.24	+0.2
3,678,677	+		DZA65_RS17050	0.24	-1.8
3,678,795	-		DZA65_RS17050	0.29	+0.5
3,678,819	+		DZA65_RS17050	0.30	+0.9
3,678,820	-		DZA65_RS17050	0.30	+0.0
3,678,833	+		DZA65_RS17050	0.30	-1.7
3,678,878	+		DZA65_RS17050	0.32	-1.0
3,678,879	-		DZA65_RS17050	0.32	-0.3
3,679,016	+		DZA65_RS17050	0.37	+1.1
3,679,032	+		DZA65_RS17050	0.38	+0.1
3,679,183	+		DZA65_RS17050	0.43	-0.1
3,679,183	+		DZA65_RS17050	0.43	+0.0
3,679,183	+				-0.3
3,679,184	-		DZA65_RS17050	0.43	-0.5
3,679,326	+		DZA65_RS17050	0.49	+0.0
3,679,330	+		DZA65_RS17050	0.49	+1.3
3,679,421	-		DZA65_RS17050	0.52	+0.3
3,679,576	+		DZA65_RS17050	0.58	-0.1
3,679,579	-		DZA65_RS17050	0.58	+0.3
3,679,637	+		DZA65_RS17050	0.61	+0.2
3,679,638	-		DZA65_RS17050	0.61	-0.7
3,679,665	-		DZA65_RS17050	0.62	+1.3
3,679,665	-		DZA65_RS17050	0.62	-0.5
3,679,665	-		DZA65_RS17050	0.62	-0.5
3,679,700	-		DZA65_RS17050	0.63	+0.0
3,679,910	+		DZA65_RS17050	0.71	+1.1
3,679,928	+		DZA65_RS17050	0.72	+0.2
3,679,989	-		DZA65_RS17050	0.74	-0.3
3,680,035	+		DZA65_RS17050	0.76	+1.2
3,680,177	+		DZA65_RS17050	0.81	+0.7
3,680,416	-				-0.1
3,680,517	+				-0.2
3,680,520	+				+0.9
3,680,521	-				-1.2
3,680,521	-				+0.5
3,680,580	-				-1.3
3,680,611	+				+1.0
3,680,617	+				-0.1
3,680,628	+				-1.7
3,680,633	-				+0.2
3,680,677	-				+0.3
3,680,680	+				+1.3
3,680,806	+				-0.7
3,680,874	-		DZA65_RS17055	0.12	-0.2
3,680,885	+		DZA65_RS17055	0.13	-1.5
3,680,886	-		DZA65_RS17055	0.13	-0.5
3,680,956	+		DZA65_RS17055	0.19	+0.8
3,680,956	+		DZA65_RS17055	0.19	-0.0
3,680,957	-		DZA65_RS17055	0.19	-0.1
3,680,974	-		DZA65_RS17055	0.20	+1.3
3,681,034	+		DZA65_RS17055	0.25	-0.0
3,681,042	-		DZA65_RS17055	0.26	-0.2
3,681,042	-		DZA65_RS17055	0.26	+1.1
3,681,057	-		DZA65_RS17055	0.27	+0.7
3,681,079	-		DZA65_RS17055	0.28	+0.2
3,681,129	-		DZA65_RS17055	0.32	-2.5
3,681,192	-		DZA65_RS17055	0.37	-0.3
3,681,194	+		DZA65_RS17055	0.38	-1.4
3,681,194	+		DZA65_RS17055	0.38	+0.3
3,681,194	+		DZA65_RS17055	0.38	+0.0
3,681,195	-		DZA65_RS17055	0.38	+0.2
3,681,195	-		DZA65_RS17055	0.38	+0.6
3,681,217	+		DZA65_RS17055	0.39	-0.9
3,681,218	-		DZA65_RS17055	0.40	-0.4
3,681,275	+		DZA65_RS17055	0.44	+0.1
3,681,275	+		DZA65_RS17055	0.44	+0.2
3,681,275	+		DZA65_RS17055	0.44	-1.1
3,681,276	-		DZA65_RS17055	0.44	+1.3
3,681,276	-		DZA65_RS17055	0.44	-1.7
3,681,278	+		DZA65_RS17055	0.44	-1.1
3,681,278	+		DZA65_RS17055	0.44	-0.1
3,681,279	-		DZA65_RS17055	0.44	-0.6
3,681,309	+		DZA65_RS17055	0.47	+0.9
3,681,332	+		DZA65_RS17055	0.49	-0.8
3,681,426	+		DZA65_RS17055	0.56	+0.6
3,681,460	-		DZA65_RS17055	0.59	-2.8
3,681,461	+		DZA65_RS17055	0.59	-0.3
3,681,461	+		DZA65_RS17055	0.59	-0.3
3,681,461	+		DZA65_RS17055	0.59	-1.6
3,681,666	+		DZA65_RS17055	0.75	-1.3