Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16910

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,651,934	+				-1.1
3,651,935	-				-0.3
3,651,938	+				+0.7
3,651,939	-				+0.5
3,651,949	-				+0.7
3,651,949	-				-1.3
3,651,972	-				+1.9
3,652,934	-				+0.4
3,653,072	-				-1.2
3,653,124	-		DZA65_RS16910	0.11	-0.7
3,653,126	+		DZA65_RS16910	0.11	+0.1
3,653,127	-		DZA65_RS16910	0.11	-1.1
3,653,127	-		DZA65_RS16910	0.11	-0.8
3,653,127	-		DZA65_RS16910	0.11	-1.9
3,653,127	-		DZA65_RS16910	0.11	-1.0
3,653,225	+		DZA65_RS16910	0.16	-1.5
3,653,226	-		DZA65_RS16910	0.16	-0.7
3,653,226	-		DZA65_RS16910	0.16	-0.9
3,653,278	-		DZA65_RS16910	0.19	-0.3
3,653,278	-		DZA65_RS16910	0.19	-0.1
3,653,278	-		DZA65_RS16910	0.19	-2.8
3,653,315	+		DZA65_RS16910	0.21	+0.3
3,653,405	-		DZA65_RS16910	0.26	+0.0
3,653,405	-		DZA65_RS16910	0.26	-2.5
3,653,416	-		DZA65_RS16910	0.27	-1.8
3,653,431	+		DZA65_RS16910	0.28	+0.2
3,653,492	-		DZA65_RS16910	0.31	+0.3
3,653,584	+		DZA65_RS16910	0.36	+0.3
3,653,584	+		DZA65_RS16910	0.36	-2.3
3,653,585	-		DZA65_RS16910	0.36	-0.5
3,653,585	-		DZA65_RS16910	0.36	-1.3
3,653,585	-		DZA65_RS16910	0.36	+0.0
3,653,588	+		DZA65_RS16910	0.36	-2.5
3,653,589	-		DZA65_RS16910	0.36	-0.7
3,653,617	+		DZA65_RS16910	0.38	+1.9
3,653,618	-		DZA65_RS16910	0.38	-1.7
3,653,622	+		DZA65_RS16910	0.38	+1.0
3,653,623	-		DZA65_RS16910	0.38	-0.4
3,653,657	-		DZA65_RS16910	0.40	-1.3
3,653,657	-		DZA65_RS16910	0.40	+0.0
3,653,691	-		DZA65_RS16910	0.42	-0.6
3,653,813	-		DZA65_RS16910	0.49	-1.1
3,653,983	-		DZA65_RS16910	0.58	-0.1
3,654,038	-		DZA65_RS16910	0.61	-0.3
3,654,038	-		DZA65_RS16910	0.61	-0.3
3,654,038	-		DZA65_RS16910	0.61	-0.9
3,654,124	+		DZA65_RS16910	0.66	+0.3
3,654,124	+		DZA65_RS16910	0.66	-2.0
3,654,124	+		DZA65_RS16910	0.66	-0.1
3,654,284	+		DZA65_RS16910	0.75	-1.3
3,654,285	-		DZA65_RS16910	0.75	+1.8
3,654,382	+		DZA65_RS16910	0.81	-1.1
3,654,521	-		DZA65_RS16910	0.88	-1.0
3,654,544	+		DZA65_RS16910	0.90	-1.0
3,654,754	+				+0.4
3,654,755	-				-1.5
3,654,803	-				-1.7
3,654,816	+				-1.6
3,654,816	+				-0.5
3,654,836	-				+0.5
3,654,836	-				-0.5
3,654,836	-				-0.5
3,654,858	+				-0.5
3,654,859	-				-0.9
3,654,859	-				-1.3
3,654,859	-				-1.1
3,654,889	+				+0.2
3,654,937	+				-1.2
3,654,937	+				+0.0
3,654,938	-				-0.1
3,654,960	+				+1.3
3,654,960	+				+0.1
3,654,960	+				-1.0
3,654,961	-				-0.4
3,654,961	-				-0.4
3,654,961	-				+0.0
3,654,961	-				-2.4
3,654,961	-				-0.2
3,654,961	-				+1.5
3,654,962	+				-0.6
3,654,962	+				-0.0
3,654,963	-				+0.6
3,654,963	-				-0.7
3,655,073	+		DZA65_RS16915	0.17	+0.5
3,655,073	+		DZA65_RS16915	0.17	-2.1
3,655,102	-		DZA65_RS16915	0.23	-1.5
3,655,457	+				+0.0
3,655,457	+				+1.3
3,655,458	-				+0.3
3,655,573	+		DZA65_RS16920	0.12	-0.8
3,655,657	-		DZA65_RS16920	0.21	-2.5
3,655,657	-		DZA65_RS16920	0.21	-2.2
3,655,657	-				-1.0
3,655,721	+		DZA65_RS16920	0.27	+0.3
3,655,722	-		DZA65_RS16920	0.28	-1.0