Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS16785

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,620,849	+		DZA65_RS16780	0.76	-0.6
3,620,849	+		DZA65_RS16780	0.76	+0.1
3,620,850	-		DZA65_RS16780	0.76	-1.1
3,620,900	+		DZA65_RS16780	0.80	-0.5
3,620,908	+		DZA65_RS16780	0.81	-0.4
3,620,908	+		DZA65_RS16780	0.81	-1.0
3,620,908	+		DZA65_RS16780	0.81	+0.4
3,620,909	-		DZA65_RS16780	0.81	-0.9
3,620,909	-		DZA65_RS16780	0.81	-1.0
3,620,909	-		DZA65_RS16780	0.81	-0.3
3,620,909	-		DZA65_RS16780	0.81	-1.4
3,620,909	-		DZA65_RS16780	0.81	-0.9
3,620,909	-		DZA65_RS16780	0.81	-2.3
3,621,022	+				+0.5
3,621,023	-				-0.4
3,621,023	-				-0.1
3,621,023	-				-2.1
3,621,026	+				+0.4
3,621,026	+				-0.0
3,621,027	-				+0.1
3,621,045	+				-0.9
3,621,045	+				-0.1
3,621,045	+				+0.0
3,621,104	-				+0.0
3,621,128	+				-0.8
3,621,128	+				-0.3
3,621,128	+				-0.3
3,621,128	+				+1.0
3,621,128	+				+1.1
3,621,128	+				+0.7
3,621,129	-				-0.7
3,621,129	-				+1.0
3,621,129	-				-0.1
3,621,129	-				-1.3
3,621,129	-				-1.3
3,621,129	-				+0.3
3,621,129	-				-0.4
3,621,131	+				-0.0
3,621,131	+				-1.7
3,621,131	+				+0.9
3,621,131	+				+1.3
3,621,132	-				+0.7
3,621,132	-				-0.4
3,621,132	-				-0.0
3,621,132	-				-0.7
3,621,132	-				-1.3
3,621,132	-				-0.6
3,621,132	-				+1.9
3,621,132	-				+0.1
3,621,133	+				+0.9
3,621,141	-				-0.1
3,621,152	-				+0.3
3,621,325	+				-2.0
3,621,325	+				+0.2
3,621,325	+				-0.3
3,621,336	+				-0.3
3,621,343	+				-0.4
3,621,343	+				-1.5
3,621,344	-				-0.1
3,621,345	+				+0.3
3,621,345	+				-0.0
3,621,369	+				+0.5
3,621,439	+				-0.3
3,621,469	+				+0.2
3,621,492	+				-0.0
3,621,674	+				-0.7
3,621,674	+				-1.9
3,621,703	+				-0.1
3,621,703	+				-1.9
3,621,704	-				+0.0
3,621,708	-				+1.5
3,621,708	-				-1.7
3,621,716	-				-0.9
3,621,719	-				+0.1
3,621,722	-				+1.0
3,621,763	+				+0.4
3,621,763	+				+0.6
3,621,790	+				+0.3
3,621,791	-				-1.0
3,621,791	-				-1.2
3,621,791	-				-0.3
3,621,813	+				-0.6
3,621,852	-				+0.1
3,621,852	-				+1.6
3,621,896	+		DZA65_RS16785	0.15	-0.5
3,621,896	+		DZA65_RS16785	0.15	+1.6
3,622,047	+		DZA65_RS16785	0.54	-0.1
3,622,048	-		DZA65_RS16785	0.54	+1.1
3,622,052	+		DZA65_RS16785	0.55	-0.4
3,622,095	+		DZA65_RS16785	0.66	+1.0
3,622,095	+		DZA65_RS16785	0.66	-0.2
3,622,096	-		DZA65_RS16785	0.66	+1.1
3,622,096	-		DZA65_RS16785	0.66	+0.2
3,622,109	+		DZA65_RS16785	0.69	+0.8
3,622,300	+				-0.8
3,622,471	-				-0.5
3,622,595	+				-0.9
3,622,595	+				+0.1
3,622,595	+				+0.4
3,622,595	+				+0.5
3,622,595	+				+1.2
3,622,595	+				-2.0
3,622,595	+				-0.6
3,622,595	+				-0.5
3,622,595	+				-1.1
3,622,595	+				-0.4
3,622,595	+				+0.2
3,622,595	+				+0.6
3,622,596	-				-0.9
3,622,596	-				-1.3
3,622,596	-				+0.5
3,622,596	-				+0.1
3,622,596	-				-0.4
3,622,596	-				-0.4
3,622,596	-				-0.4
3,622,596	-				-0.8
3,622,596	-				-0.0
3,622,596	-				+0.6
3,622,596	-				+0.4
3,622,635	-				+0.6
3,622,635	-				+0.4
3,622,635	-				-0.8
3,622,667	+				-0.0
3,622,799	+		DZA65_RS16790	0.18	+1.0
3,622,799	+		DZA65_RS16790	0.18	-1.3
3,622,800	-		DZA65_RS16790	0.18	-0.3
3,622,800	-		DZA65_RS16790	0.18	-0.7
3,622,915	-		DZA65_RS16790	0.27	-0.7
3,622,915	-		DZA65_RS16790	0.27	-0.3
3,622,915	-		DZA65_RS16790	0.27	+0.3
3,622,915	-		DZA65_RS16790	0.27	+0.4
3,623,003	+		DZA65_RS16790	0.35	-1.0
3,623,003	+		DZA65_RS16790	0.35	-0.6
3,623,052	-		DZA65_RS16790	0.39	+0.8
3,623,058	+		DZA65_RS16790	0.39	+0.3
3,623,058	+		DZA65_RS16790	0.39	-0.1
3,623,058	+		DZA65_RS16790	0.39	+0.4
3,623,058	+		DZA65_RS16790	0.39	-0.0
3,623,058	+		DZA65_RS16790	0.39	-1.3
3,623,058	+		DZA65_RS16790	0.39	+1.7
3,623,059	-		DZA65_RS16790	0.39	-0.3
3,623,059	-		DZA65_RS16790	0.39	-0.8
3,623,059	-		DZA65_RS16790	0.39	-1.1
3,623,059	-		DZA65_RS16790	0.39	-0.3
3,623,059	-		DZA65_RS16790	0.39	+0.1
3,623,059	-		DZA65_RS16790	0.39	-0.1
3,623,091	+		DZA65_RS16790	0.42	-0.0
3,623,091	+		DZA65_RS16790	0.42	+0.7
3,623,092	-		DZA65_RS16790	0.42	-0.4
3,623,092	-		DZA65_RS16790	0.42	+0.1
3,623,201	+		DZA65_RS16790	0.51	-1.0
3,623,201	+		DZA65_RS16790	0.51	-1.5
3,623,201	+		DZA65_RS16790	0.51	-0.6
3,623,202	-		DZA65_RS16790	0.51	+0.1
3,623,205	+		DZA65_RS16790	0.51	+0.2
3,623,205	+		DZA65_RS16790	0.51	-0.1
3,623,205	+		DZA65_RS16790	0.51	-0.5
3,623,205	+		DZA65_RS16790	0.51	-0.6
3,623,205	+		DZA65_RS16790	0.51	+0.2
3,623,205	+		DZA65_RS16790	0.51	-1.3
3,623,205	+		DZA65_RS16790	0.51	+0.2
3,623,205	+		DZA65_RS16790	0.51	+0.2
3,623,206	-		DZA65_RS16790	0.51	+0.7
3,623,206	-		DZA65_RS16790	0.51	-0.4
3,623,206	-		DZA65_RS16790	0.51	-0.7
3,623,206	-		DZA65_RS16790	0.51	-2.3
3,623,206	-		DZA65_RS16790	0.51	-0.3
3,623,206	-		DZA65_RS16790	0.51	-0.1
3,623,206	-		DZA65_RS16790	0.51	-0.8
3,623,206	-		DZA65_RS16790	0.51	-1.3
3,623,206	-		DZA65_RS16790	0.51	-1.1
3,623,206	-		DZA65_RS16790	0.51	-0.6
3,623,206	-		DZA65_RS16790	0.51	-1.3
3,623,206	-		DZA65_RS16790	0.51	-0.2
3,623,206	-		DZA65_RS16790	0.51	-1.1