Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,387,487	+		DZA65_RS15585	0.61	+0.2
3,387,488	-		DZA65_RS15585	0.61	+1.6
3,387,488	-		DZA65_RS15585	0.61	+0.4
3,387,488	-		DZA65_RS15585	0.61	+0.8
3,387,488	-		DZA65_RS15585	0.61	+0.1
3,387,488	-		DZA65_RS15585	0.61	+0.0
3,387,558	-		DZA65_RS15585	0.64	-0.3
3,387,558	-		DZA65_RS15585	0.64	+2.2
3,387,634	+		DZA65_RS15585	0.68	-0.6
3,387,661	+		DZA65_RS15585	0.69	-0.9
3,387,661	+		DZA65_RS15585	0.69	+0.1
3,387,662	-		DZA65_RS15585	0.69	+0.4
3,387,670	+		DZA65_RS15585	0.70	-1.6
3,387,670	+		DZA65_RS15585	0.70	-0.0
3,387,670	+		DZA65_RS15585	0.70	+1.5
3,387,670	+		DZA65_RS15585	0.70	+0.7
3,387,671	-		DZA65_RS15585	0.70	+0.4
3,387,671	-		DZA65_RS15585	0.70	+0.2
3,387,675	+		DZA65_RS15585	0.70	-0.3
3,387,675	+		DZA65_RS15585	0.70	-0.5
3,387,675	+		DZA65_RS15585	0.70	+0.7
3,387,675	+		DZA65_RS15585	0.70	+0.4
3,387,675	+		DZA65_RS15585	0.70	-1.8
3,387,675	+		DZA65_RS15585	0.70	-0.9
3,387,676	-		DZA65_RS15585	0.70	-1.8
3,387,676	-		DZA65_RS15585	0.70	-0.2
3,387,676	-		DZA65_RS15585	0.70	+1.5
3,387,786	+		DZA65_RS15585	0.75	-1.6
3,387,786	+		DZA65_RS15585	0.75	-1.8
3,387,786	+		DZA65_RS15585	0.75	-1.8
3,387,786	+		DZA65_RS15585	0.75	-0.2
3,387,786	+		DZA65_RS15585	0.75	-1.3
3,387,787	-		DZA65_RS15585	0.75	+0.8
3,387,787	-		DZA65_RS15585	0.75	+0.6
3,387,838	+		DZA65_RS15585	0.77	+0.2
3,387,838	+		DZA65_RS15585	0.77	+1.0
3,387,838	+		DZA65_RS15585	0.77	+0.5
3,387,838	+		DZA65_RS15585	0.77	+0.5
3,387,838	+		DZA65_RS15585	0.77	-0.6
3,387,839	-		DZA65_RS15585	0.77	-1.2
3,387,839	-		DZA65_RS15585	0.77	-0.5
3,387,839	-		DZA65_RS15585	0.77	+0.4
3,387,839	-		DZA65_RS15585	0.77	-1.3
3,387,840	+		DZA65_RS15585	0.77	+0.9
3,387,840	+		DZA65_RS15585	0.77	-0.4
3,387,856	+		DZA65_RS15585	0.78	-0.6
3,387,856	+		DZA65_RS15585	0.78	-0.6
3,387,856	+		DZA65_RS15585	0.78	+0.2
3,387,856	+		DZA65_RS15585	0.78	+0.2
3,387,856	+		DZA65_RS15585	0.78	+0.8
3,387,856	+		DZA65_RS15585	0.78	-1.1
3,387,857	-				+0.2
3,387,857	-		DZA65_RS15585	0.78	+0.1
3,387,905	+		DZA65_RS15585	0.80	-0.6
3,387,905	+		DZA65_RS15585	0.80	+0.1
3,387,906	-		DZA65_RS15585	0.80	-1.0
3,387,906	-		DZA65_RS15585	0.80	+0.2
3,387,906	-		DZA65_RS15585	0.80	-2.1
3,387,906	-		DZA65_RS15585	0.80	-0.6
3,387,946	+		DZA65_RS15585	0.82	-0.2
3,387,946	+		DZA65_RS15585	0.82	-0.2
3,387,947	-		DZA65_RS15585	0.82	-0.6
3,387,947	-		DZA65_RS15585	0.82	+1.2
3,387,947	-		DZA65_RS15585	0.82	-0.3
3,387,947	-		DZA65_RS15585	0.82	+0.0
3,387,947	-		DZA65_RS15585	0.82	-1.0
3,387,947	-		DZA65_RS15585	0.82	-0.2
3,387,952	+		DZA65_RS15585	0.82	-0.4
3,387,952	+		DZA65_RS15585	0.82	+0.9
3,387,952	+		DZA65_RS15585	0.82	+0.2
3,387,952	+		DZA65_RS15585	0.82	-1.0
3,387,952	+		DZA65_RS15585	0.82	+0.9
3,387,953	-		DZA65_RS15585	0.82	-1.1
3,387,953	-		DZA65_RS15585	0.82	-0.3
3,387,953	-		DZA65_RS15585	0.82	+0.4
3,387,955	-		DZA65_RS15585	0.82	-1.9
3,388,048	+		DZA65_RS15585	0.87	+0.4
3,388,048	+		DZA65_RS15585	0.87	-2.1
3,388,048	+		DZA65_RS15585	0.87	-0.3
3,388,048	+		DZA65_RS15585	0.87	+0.1
3,388,048	+		DZA65_RS15585	0.87	-1.3
3,388,049	-		DZA65_RS15585	0.87	+1.6
3,388,049	-		DZA65_RS15585	0.87	+0.5
3,388,049	-		DZA65_RS15585	0.87	-0.7
3,388,049	-		DZA65_RS15585	0.87	+0.6
3,388,049	-		DZA65_RS15585	0.87	+0.2
3,388,102	+		DZA65_RS15585	0.89	+0.2
3,388,102	+		DZA65_RS15585	0.89	-1.9
3,388,102	+		DZA65_RS15585	0.89	+0.1
3,388,102	+		DZA65_RS15585	0.89	-0.2
3,388,103	-		DZA65_RS15585	0.89	-0.8
3,388,103	-		DZA65_RS15585	0.89	-0.8
3,388,103	-		DZA65_RS15585	0.89	+0.2
3,388,118	-		DZA65_RS15585	0.90	-0.6
3,388,153	+				-1.3
3,388,153	+				+0.0
3,388,153	+				+0.0
3,388,154	-				-1.5
3,388,162	+				+0.3
3,388,162	+				+0.9
3,388,162	+				-0.5
3,388,162	+				+0.3
3,388,223	+				-0.2
3,388,224	-				-0.4
3,388,224	-				-0.5
3,388,224	-				+0.8
3,388,224	-				+0.2
3,388,240	-				+0.5
3,388,258	+				-0.1
3,388,258	+				-0.1
3,388,258	+				-0.6
3,388,259	-				-1.8
3,388,259	-				+0.2
3,388,259	-				-1.6
3,388,259	-				-0.9
3,388,294	+				-0.2
3,388,294	+				-0.9
3,388,294	+				-0.4
3,388,295	-				+0.1
3,388,295	-				+0.7
3,388,295	-				-0.4
3,388,295	-				-0.1
3,388,339	+				+1.2
3,388,339	+				+0.7
3,388,339	+				-1.3
3,388,339	+				-0.2
3,388,340	-				-0.8
3,388,340	-				-0.3
3,388,447	+				+0.2
3,388,447	+				-1.3
3,388,447	+				-0.3
3,388,448	-				-0.3
3,388,448	-				+0.1
3,388,448	-				-0.3
3,388,448	-				-0.9
3,388,448	-				+0.7
3,388,453	+				-0.3
3,388,454	-				-0.8
3,388,454	-				+0.8
3,388,567	-				+0.7
3,388,678	+		DZA65_RS15590	0.18	-0.3
3,388,730	-		DZA65_RS15590	0.23	+0.1
3,388,777	+		DZA65_RS15590	0.27	-0.7
3,388,777	+		DZA65_RS15590	0.27	+1.6
3,388,778	-		DZA65_RS15590	0.27	+0.9
3,388,801	+		DZA65_RS15590	0.29	+0.5
3,388,802	-		DZA65_RS15590	0.29	-0.0
3,388,832	+		DZA65_RS15590	0.31	-0.5
3,388,832	+		DZA65_RS15590	0.31	+0.9
3,388,832	+		DZA65_RS15590	0.31	+0.0
3,388,832	+		DZA65_RS15590	0.31	+0.3
3,388,833	-		DZA65_RS15590	0.31	-0.1
3,388,833	-		DZA65_RS15590	0.31	+0.7
3,388,964	+		DZA65_RS15590	0.42	-0.3
3,388,964	+		DZA65_RS15590	0.42	+1.8
3,388,965	-		DZA65_RS15590	0.42	-0.3
3,388,965	-		DZA65_RS15590	0.42	-0.3
3,388,965	-		DZA65_RS15590	0.42	+0.5
3,388,965	-		DZA65_RS15590	0.42	+0.0
3,388,965	-		DZA65_RS15590	0.42	+0.7
3,388,986	+		DZA65_RS15590	0.44	-0.6
3,388,986	+		DZA65_RS15590	0.44	+0.4
3,388,986	+		DZA65_RS15590	0.44	-0.9
3,388,986	+		DZA65_RS15590	0.44	-2.3
3,388,986	+		DZA65_RS15590	0.44	-0.8
3,388,987	-		DZA65_RS15590	0.44	+0.1
3,389,052	-		DZA65_RS15590	0.50	-0.3
3,389,052	-		DZA65_RS15590	0.50	+0.2
3,389,052	-		DZA65_RS15590	0.50	-2.5
3,389,052	-		DZA65_RS15590	0.50	+0.2
3,389,588	+				-0.4
3,389,853	+		DZA65_RS15595	0.13	+0.2
3,389,853	+		DZA65_RS15595	0.13	+0.2
3,389,854	-		DZA65_RS15595	0.13	-0.9
3,389,884	-		DZA65_RS15595	0.15	+0.4
3,389,884	-		DZA65_RS15595	0.15	-0.8
3,389,904	-		DZA65_RS15595	0.16	+0.1
3,389,904	-		DZA65_RS15595	0.16	+0.2
3,389,904	-		DZA65_RS15595	0.16	+0.1
3,389,904	-		DZA65_RS15595	0.16	-1.2
3,389,904	-		DZA65_RS15595	0.16	-0.8
3,389,904	-		DZA65_RS15595	0.16	-2.1
3,389,912	+		DZA65_RS15595	0.16	-0.3
3,389,912	+		DZA65_RS15595	0.16	+0.2
3,389,912	+		DZA65_RS15595	0.16	-0.3
3,389,912	+		DZA65_RS15595	0.16	+0.1
3,389,913	-		DZA65_RS15595	0.16	+1.0
3,389,913	-		DZA65_RS15595	0.16	+0.1
3,389,913	-		DZA65_RS15595	0.16	-0.3
3,389,913	-		DZA65_RS15595	0.16	+1.4
3,389,913	-		DZA65_RS15595	0.16	-0.5
3,389,988	-		DZA65_RS15595	0.21	-0.6
3,390,091	-		DZA65_RS15595	0.27	+0.1
3,390,244	-		DZA65_RS15595	0.37	-0.5
3,390,266	+		DZA65_RS15595	0.38	+0.2
3,390,267	-		DZA65_RS15595	0.38	-1.9
3,390,267	-		DZA65_RS15595	0.38	+0.2
3,390,267	-		DZA65_RS15595	0.38	-0.7
3,390,269	+		DZA65_RS15595	0.38	-1.1
3,390,269	+		DZA65_RS15595	0.38	-1.3
3,390,269	+		DZA65_RS15595	0.38	-0.6
3,390,269	+		DZA65_RS15595	0.38	-1.3
3,390,269	+		DZA65_RS15595	0.38	-2.8
3,390,269	+		DZA65_RS15595	0.38	-0.9
3,390,270	-		DZA65_RS15595	0.38	+0.7
3,390,270	-		DZA65_RS15595	0.38	-0.5
3,390,270	-		DZA65_RS15595	0.38	-1.0
3,390,270	-		DZA65_RS15595	0.38	-1.3
3,390,270	-		DZA65_RS15595	0.38	-0.9
3,390,270	-		DZA65_RS15595	0.38	+0.2
3,390,270	-				+1.2
3,390,272	+		DZA65_RS15595	0.38	+0.2
3,390,272	+		DZA65_RS15595	0.38	+0.9
3,390,272	+		DZA65_RS15595	0.38	-0.6
3,390,272	+		DZA65_RS15595	0.38	-0.5
3,390,272	+		DZA65_RS15595	0.38	-0.3
3,390,272	+		DZA65_RS15595	0.38	+1.2
3,390,272	+		DZA65_RS15595	0.38	-2.3
3,390,273	-		DZA65_RS15595	0.39	-0.9
3,390,273	-		DZA65_RS15595	0.39	+1.7
3,390,273	-		DZA65_RS15595	0.39	+0.4
3,390,273	-		DZA65_RS15595	0.39	+0.7
3,390,273	-		DZA65_RS15595	0.39	-0.5
3,390,273	-		DZA65_RS15595	0.39	-0.9
3,390,273	-		DZA65_RS15595	0.39	-1.2
3,390,317	-		DZA65_RS15595	0.41	-1.8
3,390,353	+		DZA65_RS15595	0.43	+0.0
3,390,354	-		DZA65_RS15595	0.44	+2.2
3,390,354	-		DZA65_RS15595	0.44	-0.7
3,390,354	-		DZA65_RS15595	0.44	-1.3
3,390,389	+		DZA65_RS15595	0.46	-0.9
3,390,390	-		DZA65_RS15595	0.46	-1.0
3,390,390	-		DZA65_RS15595	0.46	-0.6
3,390,390	-		DZA65_RS15595	0.46	+0.0
3,390,390	-		DZA65_RS15595	0.46	-0.2
3,390,390	-		DZA65_RS15595	0.46	-0.1
3,390,390	-		DZA65_RS15595	0.46	+0.2
3,390,558	+		DZA65_RS15595	0.56	+0.7
3,390,559	-		DZA65_RS15595	0.56	-1.5