Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14475

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,152,447	+		DZA65_RS14465	0.45	+0.0
3,152,562	-		DZA65_RS14465	0.60	-0.9
3,152,679	+		DZA65_RS14465	0.76	+0.0
3,152,688	+		DZA65_RS14465	0.77	-1.1
3,152,688	+		DZA65_RS14465	0.77	+0.1
3,152,689	-		DZA65_RS14465	0.77	-0.2
3,152,689	-		DZA65_RS14465	0.77	-0.1
3,152,689	-		DZA65_RS14465	0.77	+0.2
3,152,753	+		DZA65_RS14465	0.86	-0.3
3,152,811	+				-0.2
3,152,811	+				-0.3
3,152,812	-				+0.1
3,152,812	-				+1.1
3,152,812	-				-1.3
3,152,812	-				+1.1
3,152,842	+				+0.1
3,152,843	-				+0.4
3,152,854	+				+0.1
3,152,854	+				-0.4
3,152,854	+				-0.6
3,152,855	-				-0.4
3,152,855	-				+0.9
3,152,855	-				+0.1
3,152,855	-				+0.9
3,152,855	-				-0.4
3,152,856	+				-0.0
3,152,856	+				-0.1
3,152,856	+				-1.7
3,152,856	+				-1.0
3,152,856	+				-0.3
3,152,856	+				+0.0
3,152,856	+				+0.1
3,152,856	+				+0.7
3,152,856	+				+0.6
3,152,856	+				-1.4
3,152,856	+				+0.8
3,152,856	+				-0.3
3,152,856	+				+0.0
3,152,857	-				-1.1
3,152,857	-				+0.1
3,152,857	-				-2.4
3,152,857	-				-0.4
3,152,857	-				-0.6
3,152,857	-				+1.1
3,152,857	-				-0.7
3,152,857	-				-0.4
3,152,857	-				-0.6
3,152,857	-				+0.6
3,152,868	-				+0.1
3,152,874	+				-0.6
3,152,874	+				+0.0
3,152,874	+				+0.6
3,152,874	+				-0.4
3,152,874	+				-0.2
3,152,874	+				-0.3
3,152,875	-				-0.0
3,152,875	-				+0.1
3,152,875	-				-0.6
3,152,875	-				-0.8
3,152,875	-				+0.7
3,152,875	-				-0.3
3,152,875	-				-0.4
3,152,875	-				-0.2
3,152,875	-				+0.1
3,152,875	-				-0.6
3,152,875	-				+0.4
3,152,875	-				+0.0
3,152,875	-				-0.9
3,152,891	+				+0.2
3,152,931	+				-0.4
3,152,932	-				-1.7
3,152,932	-				+0.3
3,152,997	+		DZA65_RS14470	0.11	+0.7
3,152,997	+		DZA65_RS14470	0.11	-0.9
3,153,060	+		DZA65_RS14470	0.33	-1.2
3,153,061	-		DZA65_RS14470	0.33	+0.1
3,153,075	+		DZA65_RS14470	0.38	-0.0
3,153,129	+		DZA65_RS14470	0.57	-0.2
3,153,129	+		DZA65_RS14470	0.57	+1.4
3,153,129	+		DZA65_RS14470	0.57	-0.3
3,153,129	+		DZA65_RS14470	0.57	-0.3
3,153,129	+		DZA65_RS14470	0.57	-0.2
3,153,130	-		DZA65_RS14470	0.57	-0.6
3,153,130	-		DZA65_RS14470	0.57	-0.0
3,153,130	-		DZA65_RS14470	0.57	-1.4
3,153,130	-		DZA65_RS14470	0.57	+0.2
3,153,160	+		DZA65_RS14470	0.67	-1.8
3,153,200	-		DZA65_RS14470	0.81	+0.6
3,153,216	+		DZA65_RS14470	0.87	+0.9
3,153,216	+		DZA65_RS14470	0.87	-0.6
3,153,216	+		DZA65_RS14470	0.87	-0.4
3,153,217	-		DZA65_RS14470	0.87	+0.7
3,153,231	+				-0.2
3,153,231	+				+1.1
3,153,231	+				+0.0
3,153,232	-				+0.2
3,153,232	-				-0.3
3,153,242	-				+0.4
3,153,251	+				+0.0
3,153,251	+				-0.3
3,153,251	+				-2.0
3,153,252	-				-1.8
3,153,252	-				-1.4
3,153,252	-				-0.3
3,153,287	+				+0.2
3,153,288	-				-2.9
3,153,288	-				-1.2
3,153,288	-				+0.4
3,153,297	+				+1.1
3,153,352	+				-0.1
3,153,367	+				-0.1
3,153,374	+				+0.7
3,153,426	+				-0.5
3,153,427	-				-2.0
3,153,427	-				-1.3
3,153,479	+				-0.4
3,153,480	-				+0.1
3,153,519	+		DZA65_RS14475	0.11	-0.3
3,153,519	+		DZA65_RS14475	0.11	-0.9
3,153,520	-		DZA65_RS14475	0.11	-0.9
3,153,520	-		DZA65_RS14475	0.11	-2.6
3,153,520	-				-1.4
3,153,521	+		DZA65_RS14475	0.11	+0.4
3,153,521	+		DZA65_RS14475	0.11	-1.7
3,153,521	+		DZA65_RS14475	0.11	+0.1
3,153,521	+		DZA65_RS14475	0.11	+1.9
3,153,521	+		DZA65_RS14475	0.11	-0.7
3,153,522	-		DZA65_RS14475	0.11	-1.3
3,153,522	-		DZA65_RS14475	0.11	+0.3
3,153,608	+		DZA65_RS14475	0.20	+0.8
3,153,608	+		DZA65_RS14475	0.20	-1.7
3,153,616	-		DZA65_RS14475	0.21	+0.0
3,153,698	+		DZA65_RS14475	0.30	-1.0
3,153,698	+		DZA65_RS14475	0.30	+1.1
3,153,698	+		DZA65_RS14475	0.30	+0.1
3,153,801	+		DZA65_RS14475	0.41	-1.1
3,153,801	+		DZA65_RS14475	0.41	+0.1
3,153,801	+		DZA65_RS14475	0.41	-0.3
3,153,801	+		DZA65_RS14475	0.41	+0.7
3,153,801	+		DZA65_RS14475	0.41	-0.2
3,153,802	-		DZA65_RS14475	0.41	+0.2
3,153,804	+		DZA65_RS14475	0.41	-0.9
3,153,804	+		DZA65_RS14475	0.41	+0.5
3,153,804	+		DZA65_RS14475	0.41	-0.4
3,153,804	+		DZA65_RS14475	0.41	-0.1
3,153,804	+		DZA65_RS14475	0.41	+0.1
3,153,805	-		DZA65_RS14475	0.41	-0.2
3,153,805	-		DZA65_RS14475	0.41	-0.3
3,153,805	-		DZA65_RS14475	0.41	+1.1
3,153,805	-		DZA65_RS14475	0.41	-0.2
3,153,805	-		DZA65_RS14475	0.41	-1.0
3,153,808	-		DZA65_RS14475	0.41	+1.1
3,153,903	+		DZA65_RS14475	0.51	+0.6
3,153,904	-		DZA65_RS14475	0.51	-0.9
3,153,904	-		DZA65_RS14475	0.51	-0.3
3,153,921	+		DZA65_RS14475	0.53	-1.9
3,153,921	+		DZA65_RS14475	0.53	-1.1
3,153,921	+		DZA65_RS14475	0.53	-1.0
3,153,922	-		DZA65_RS14475	0.53	-0.4
3,153,933	+		DZA65_RS14475	0.54	-0.2
3,153,933	+		DZA65_RS14475	0.54	+0.6
3,153,933	+		DZA65_RS14475	0.54	+0.4
3,153,933	+		DZA65_RS14475	0.54	-0.1
3,153,935	+		DZA65_RS14475	0.55	-0.9
3,153,936	-		DZA65_RS14475	0.55	-0.5
3,153,978	-		DZA65_RS14475	0.59	-0.9
3,153,978	-		DZA65_RS14475	0.59	-0.9
3,154,012	+		DZA65_RS14475	0.63	-0.6
3,154,012	+		DZA65_RS14475	0.63	+0.7
3,154,012	+		DZA65_RS14475	0.63	+0.9
3,154,012	+		DZA65_RS14475	0.63	-0.3
3,154,013	-		DZA65_RS14475	0.63	+0.0
3,154,013	-		DZA65_RS14475	0.63	-0.3
3,154,013	-		DZA65_RS14475	0.63	-0.1
3,154,013	-		DZA65_RS14475	0.63	+0.1
3,154,044	-		DZA65_RS14475	0.66	+0.1
3,154,044	-		DZA65_RS14475	0.66	-0.1
3,154,044	-		DZA65_RS14475	0.66	-1.1
3,154,104	+		DZA65_RS14475	0.73	-0.3
3,154,104	+		DZA65_RS14475	0.73	+0.2
3,154,104	+		DZA65_RS14475	0.73	-3.1
3,154,104	+		DZA65_RS14475	0.73	-1.0
3,154,104	+		DZA65_RS14475	0.73	-2.2
3,154,104	+		DZA65_RS14475	0.73	+0.1
3,154,105	-		DZA65_RS14475	0.73	-0.6
3,154,105	-		DZA65_RS14475	0.73	+0.1
3,154,105	-		DZA65_RS14475	0.73	-0.6
3,154,105	-		DZA65_RS14475	0.73	-1.5
3,154,108	+		DZA65_RS14475	0.73	-1.1
3,154,108	+		DZA65_RS14475	0.73	+1.7
3,154,108	+		DZA65_RS14475	0.73	-1.1
3,154,108	+		DZA65_RS14475	0.73	-0.9
3,154,108	+		DZA65_RS14475	0.73	-0.2
3,154,108	+		DZA65_RS14475	0.73	+1.1
3,154,109	-		DZA65_RS14475	0.73	-1.2
3,154,109	-		DZA65_RS14475	0.73	+0.6
3,154,109	-		DZA65_RS14475	0.73	-1.4
3,154,109	-		DZA65_RS14475	0.73	-0.8
3,154,118	+		DZA65_RS14475	0.74	+0.8
3,154,136	+		DZA65_RS14475	0.76	-1.7
3,154,137	-		DZA65_RS14475	0.76	+0.1
3,154,137	-		DZA65_RS14475	0.76	-0.1
3,154,158	+		DZA65_RS14475	0.78	+0.6
3,154,159	-		DZA65_RS14475	0.78	+0.4
3,154,167	+		DZA65_RS14475	0.79	-0.7
3,154,168	-		DZA65_RS14475	0.79	-0.7
3,154,195	-		DZA65_RS14475	0.82	+0.3
3,154,242	-		DZA65_RS14475	0.87	-0.2
3,154,255	-		DZA65_RS14475	0.89	-0.9
3,154,460	+				+0.1
3,154,460	+				-0.4
3,154,460	+				+0.7
3,154,464	+				+1.0
3,154,553	+				-0.6
3,154,609	+				-0.1
3,154,609	+				+0.5
3,154,616	+				+0.1
3,154,617	-				-0.2
3,154,698	-				-0.5
3,154,710	-				-0.0
3,154,726	+				-1.0
3,154,726	+				-1.0
3,154,748	+				+0.5
3,154,754	-				+0.1
3,154,804	-				-1.0
3,155,025	+		DZA65_RS14480	0.16	+1.4
3,155,026	-		DZA65_RS14480	0.16	-1.2
3,155,148	+		DZA65_RS14480	0.27	+0.6
3,155,186	+		DZA65_RS14480	0.31	+0.4
3,155,337	-		DZA65_RS14480	0.44	-0.2
3,155,344	-		DZA65_RS14480	0.45	+0.3
3,155,359	+		DZA65_RS14480	0.46	-2.2