Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,129,937	-				-0.1
3,129,941	-				+0.9
3,130,011	-		DZA65_RS14345	0.36	+1.6
3,130,011	-		DZA65_RS14345	0.36	-0.1
3,130,017	-		DZA65_RS14345	0.39	-0.1
3,130,017	-		DZA65_RS14345	0.39	-0.4
3,130,017	-		DZA65_RS14345	0.39	-0.3
3,130,017	-		DZA65_RS14345	0.39	-0.2
3,130,151	+				-0.9
3,130,151	+				-0.2
3,130,152	-				-0.7
3,130,152	-				+0.1
3,130,152	-				+0.8
3,130,235	-		DZA65_RS14350	0.14	-1.4
3,130,273	+		DZA65_RS14350	0.21	-0.2
3,130,320	-		DZA65_RS14350	0.29	-1.2
3,130,400	+		DZA65_RS14350	0.42	+0.1
3,130,427	+		DZA65_RS14350	0.47	+0.2
3,130,427	+		DZA65_RS14350	0.47	-0.4
3,130,427	+		DZA65_RS14350	0.47	-2.5
3,130,427	+		DZA65_RS14350	0.47	-1.0
3,130,428	-		DZA65_RS14350	0.47	-0.2
3,130,428	-		DZA65_RS14350	0.47	-1.0
3,130,428	-		DZA65_RS14350	0.47	-0.2
3,130,524	-		DZA65_RS14350	0.64	+0.7
3,130,592	+		DZA65_RS14350	0.75	-1.2
3,130,592	+		DZA65_RS14350	0.75	-2.6
3,130,683	-				-0.0
3,130,812	+		DZA65_RS14355	0.41	-0.7
3,130,813	-		DZA65_RS14355	0.41	-0.9
3,130,813	-				+3.9
3,130,823	+		DZA65_RS14355	0.46	-1.2
3,130,823	+		DZA65_RS14355	0.46	-0.2
3,130,823	+		DZA65_RS14355	0.46	-0.7
3,130,824	-		DZA65_RS14355	0.47	+0.6
3,130,829	-		DZA65_RS14355	0.49	-1.9
3,130,913	+		DZA65_RS14355	0.89	-0.4
3,130,914	-				+0.7
3,130,914	-		DZA65_RS14355	0.90	-0.8
3,130,947	+				-0.5
3,130,947	+				-0.8
3,131,018	+				-0.9
3,131,075	-				-1.3
3,131,201	+				-0.4
3,131,202	-				-0.5
3,131,202	-				-0.3
3,131,202	-				-0.4
3,131,202	-				+0.6
3,131,202	-				+0.3
3,131,202	-				+0.6
3,131,202	-				-0.9
3,131,202	-				+0.0
3,131,291	+				-1.4
3,131,305	-				-0.9
3,131,362	+				+0.1
3,131,419	+				-1.7
3,131,703	+				-1.0
3,131,719	+				-0.3
3,131,719	+				+1.7
3,131,732	+				-0.6
3,131,732	+				-0.7
3,131,785	+		DZA65_RS14365	0.11	+0.1
3,131,790	-		DZA65_RS14365	0.11	-1.1
3,131,820	+		DZA65_RS14365	0.12	+1.1
3,131,820	+		DZA65_RS14365	0.12	-2.2
3,131,898	-		DZA65_RS14365	0.14	-1.2
3,131,903	-		DZA65_RS14365	0.14	+0.2
3,131,903	-		DZA65_RS14365	0.14	+0.3
3,131,903	-		DZA65_RS14365	0.14	-1.4
3,131,935	+		DZA65_RS14365	0.15	-0.2