Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,896,564	+		DZA65_RS13500	0.30	+0.6
2,896,565	-		DZA65_RS13500	0.30	+0.3
2,896,699	-		DZA65_RS13500	0.43	-0.1
2,896,718	+		DZA65_RS13500	0.45	-0.1
2,896,718	+		DZA65_RS13500	0.45	+1.1
2,896,718	+		DZA65_RS13500	0.45	+0.4
2,896,719	-		DZA65_RS13500	0.45	+0.4
2,896,719	-		DZA65_RS13500	0.45	+1.9
2,896,719	-		DZA65_RS13500	0.45	-0.2
2,896,719	-		DZA65_RS13500	0.45	+0.3
2,896,719	-		DZA65_RS13500	0.45	-0.7
2,896,754	+		DZA65_RS13500	0.49	-1.8
2,896,755	-		DZA65_RS13500	0.49	+0.0
2,896,755	-		DZA65_RS13500	0.49	-0.8
2,896,786	-		DZA65_RS13500	0.52	+0.9
2,896,786	-		DZA65_RS13500	0.52	-0.0
2,896,786	-		DZA65_RS13500	0.52	-0.9
2,897,008	+		DZA65_RS13500	0.74	-1.2
2,897,095	-		DZA65_RS13500	0.83	+0.1
2,897,095	-		DZA65_RS13500	0.83	+0.4
2,897,191	+				+0.5
2,897,197	+				-0.5
2,897,198	-				-0.1
2,897,244	+				-1.6
2,897,244	+				-0.9
2,897,246	+				-0.2
2,897,247	-				-0.5
2,897,260	+				-1.7
2,897,261	-				-0.3
2,897,261	-				-0.6
2,897,381	+				-1.0
2,897,381	+				-0.1
2,897,382	-				+0.5
2,897,382	-				-0.6
2,897,382	-				+0.6
2,897,382	-				-0.5
2,897,382	-				-0.0
2,897,422	+				+0.1
2,897,422	+				-0.9
2,897,422	+				+0.3
2,897,422	+				+0.4
2,897,422	+				+1.6
2,897,423	-				+1.1
2,897,423	-				-0.3
2,897,423	-				-0.9
2,897,435	+				+0.4
2,897,435	+				+0.4
2,897,435	+				+0.1
2,897,436	-				-0.2
2,897,436	-				-1.9
2,897,436	-				-0.3
2,897,436	-				-0.5
2,897,436	-				+0.5
2,897,436	-				-0.1
2,897,436	-				-0.7
2,897,485	+				-0.6
2,897,485	+				-1.0
2,897,485	+				+0.3
2,897,485	+				-1.2
2,897,485	+				-0.9
2,897,485	+				+0.0
2,897,486	-				+0.6
2,897,486	-				+0.4
2,897,486	-				+0.4
2,897,487	+				-0.7
2,897,487	+				+0.3
2,897,487	+				+0.5
2,897,487	+				+2.1
2,897,487	+				+0.2
2,897,487	+				+0.9
2,897,487	+				-0.5
2,897,487	+				-0.4
2,897,488	-				+1.1
2,897,488	-				+0.2
2,897,488	-				+0.2
2,897,488	-				+0.4
2,897,488	-				-0.1
2,897,488	-				-1.8
2,897,488	-				-0.4
2,897,488	-				-0.6
2,897,488	-				-1.7
2,897,488	-				+0.5
2,897,491	+				-0.4
2,897,491	+				+0.5
2,897,491	+				-0.5
2,897,491	+				+0.1
2,897,491	+				-0.8
2,897,491	+				-1.9
2,897,491	+				-2.3
2,897,491	+				+1.1
2,897,491	+				-0.8
2,897,491	+				-0.7
2,897,491	+				+1.4
2,897,491	+				+0.6
2,897,491	+				+0.0
2,897,491	+				-0.1
2,897,492	-				-1.8
2,897,492	-				+0.3
2,897,492	-				-0.3
2,897,492	-				-0.5
2,897,492	-				-0.9
2,897,492	-				-0.1
2,897,492	-				+0.1
2,897,492	-				-0.6
2,897,492	-				-0.3
2,897,492	-				+1.1
2,897,492	-				+0.5
2,897,492	-				-1.1
2,897,492	-				-0.1
2,897,492	-				+0.8
2,897,492	-				-0.2
2,897,492	-				-0.1
2,897,493	+				-0.6
2,897,493	+				+0.8
2,897,493	+				+0.4
2,897,493	+				-1.2
2,897,494	-				-0.5
2,897,494	-				-0.3
2,897,494	-				+0.5
2,897,494	-				-0.2
2,897,494	-				+0.6
2,897,494	-				-0.9
2,897,494	-				-0.5
2,897,494	-				+0.4
2,897,494	-				+0.1
2,897,494	-				-0.1
2,897,494	-				-0.1
2,897,517	-				-1.1
2,897,517	-				+0.9
2,897,535	+				-0.2
2,897,547	+				+0.7
2,897,552	+				+0.3
2,897,552	+				-0.2
2,897,580	+		DZA65_RS13505	0.11	+1.0
2,897,581	-		DZA65_RS13505	0.11	+0.4
2,897,646	+		DZA65_RS13505	0.36	+0.6
2,897,646	+		DZA65_RS13505	0.36	+0.7
2,897,655	+		DZA65_RS13505	0.40	-0.6
2,897,655	+		DZA65_RS13505	0.40	-0.6
2,897,655	+		DZA65_RS13505	0.40	-0.5
2,897,655	+		DZA65_RS13505	0.40	-0.2
2,897,656	-		DZA65_RS13505	0.40	+0.7
2,897,656	-		DZA65_RS13505	0.40	+0.3
2,897,656	-		DZA65_RS13505	0.40	-0.8
2,897,767	+		DZA65_RS13505	0.84	+0.8
2,897,767	+		DZA65_RS13505	0.84	+0.4
2,897,872	+				-1.3
2,897,872	+				-0.1
2,897,872	+				-0.9
2,897,872	+				+0.6
2,897,872	+				+0.7
2,897,872	+				-1.0
2,897,872	+				-0.5
2,897,873	-				+1.0
2,897,873	-				-0.6
2,897,873	-				-1.5
2,897,873	-				+0.8
2,897,873	-				+1.4
2,897,876	+				-0.4
2,897,876	+				+0.3
2,897,876	+				-1.8
2,897,876	+				-0.5
2,897,876	+				-0.9
2,897,876	+				+0.9
2,897,876	+				+0.2
2,897,876	+				-1.9
2,897,876	+				-0.5
2,897,876	+				-3.4
2,897,876	+				-0.6
2,897,876	+				+0.0
2,897,876	+				-0.5
2,897,876	+				-0.2
2,897,876	+				-0.3
2,897,876	+				-0.6
2,897,876	+				-0.4
2,897,876	+				-0.7
2,897,876	+				-0.5
2,897,876	+				+0.0
2,897,876	+				-0.2
2,897,877	-				+0.5
2,897,877	-				-0.2
2,897,877	-				-0.6
2,897,877	-				-0.5
2,897,877	-				-0.1
2,897,877	-				-0.2
2,897,877	-				-1.7
2,897,877	-				+1.1
2,897,877	-				-0.9
2,897,877	-				-1.0
2,897,877	-				-0.7
2,897,877	-				-0.8
2,897,877	-				-0.2
2,897,877	-				-0.3
2,897,877	-				-1.0
2,897,877	-				-0.6
2,897,877	-				+0.2
2,897,877	-				+0.2
2,897,877	-				-0.5
2,897,877	-				-0.1
2,897,930	+		DZA65_RS13510	0.16	+1.0
2,897,943	+		DZA65_RS13510	0.17	+0.6
2,897,944	-		DZA65_RS13510	0.17	-0.9
2,898,005	+		DZA65_RS13510	0.25	+1.0
2,898,005	+		DZA65_RS13510	0.25	-0.5
2,898,034	+		DZA65_RS13510	0.28	-0.8
2,898,034	+		DZA65_RS13510	0.28	+0.7
2,898,035	-		DZA65_RS13510	0.28	-0.7
2,898,035	-		DZA65_RS13510	0.28	-0.2
2,898,035	-		DZA65_RS13510	0.28	+0.2
2,898,035	-		DZA65_RS13510	0.28	+0.6
2,898,035	-		DZA65_RS13510	0.28	-0.2
2,898,255	+		DZA65_RS13510	0.55	-0.3
2,898,339	+		DZA65_RS13510	0.65	-0.0
2,898,339	+		DZA65_RS13510	0.65	-0.7
2,898,339	+		DZA65_RS13510	0.65	-0.2
2,898,340	-		DZA65_RS13510	0.65	-0.7
2,898,340	-		DZA65_RS13510	0.65	-1.1
2,898,340	-		DZA65_RS13510	0.65	-1.0
2,898,340	-		DZA65_RS13510	0.65	-0.7
2,898,340	-		DZA65_RS13510	0.65	-1.7
2,898,340	-		DZA65_RS13510	0.65	-0.8
2,898,519	-		DZA65_RS13510	0.87	-0.9
2,898,542	-				+0.1
2,898,609	+				-1.6
2,898,610	-				-0.9
2,898,640	+				-0.1
2,898,640	+				+0.1
2,898,640	+				-0.7
2,898,640	+				-1.2
2,898,641	-				-2.7
2,898,641	-				-1.5
2,898,641	-				-1.5
2,898,668	+				-0.4
2,898,698	+				+0.1
2,898,698	+				+0.6
2,898,698	+				+0.3
2,898,698	+				-0.2
2,898,699	-				+0.0
2,898,699	-				-0.5
2,898,699	-				+0.6
2,898,699	-				-0.1
2,898,751	+				-0.4
2,898,751	+				+0.1
2,898,751	+				-0.7
2,898,751	+				-0.4
2,898,752	-				+0.1
2,898,752	-				+0.3
2,898,752	-				+0.6
2,898,788	+				-0.0
2,898,788	+				-0.9