Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13165

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,821,327	+		DZA65_RS13155	0.72	-0.2
2,821,327	+		DZA65_RS13155	0.72	-0.8
2,821,327	+		DZA65_RS13155	0.72	-1.0
2,821,328	-		DZA65_RS13155	0.72	+0.7
2,821,328	-		DZA65_RS13155	0.72	-0.1
2,821,328	-		DZA65_RS13155	0.72	-0.2
2,821,328	-		DZA65_RS13155	0.72	+0.5
2,821,340	-		DZA65_RS13155	0.72	-0.6
2,821,373	+		DZA65_RS13155	0.75	-0.3
2,821,374	-		DZA65_RS13155	0.75	-0.1
2,821,374	-		DZA65_RS13155	0.75	-0.3
2,821,374	-		DZA65_RS13155	0.75	-1.7
2,821,374	-		DZA65_RS13155	0.75	-0.9
2,821,374	-				+0.7
2,821,374	-		DZA65_RS13155	0.75	+0.1
2,821,473	+		DZA65_RS13155	0.82	-0.2
2,821,474	-		DZA65_RS13155	0.82	-0.1
2,821,474	-		DZA65_RS13155	0.82	-0.3
2,821,484	+		DZA65_RS13155	0.83	-0.3
2,821,485	-		DZA65_RS13155	0.83	-0.3
2,821,485	-		DZA65_RS13155	0.83	+0.3
2,821,485	-		DZA65_RS13155	0.83	+0.6
2,821,526	+		DZA65_RS13155	0.86	+0.3
2,821,573	+		DZA65_RS13155	0.89	+0.3
2,821,573	+		DZA65_RS13155	0.89	+1.0
2,821,575	+		DZA65_RS13155	0.90	-2.5
2,821,575	+		DZA65_RS13155	0.90	-2.2
2,821,575	+		DZA65_RS13155	0.90	+1.5
2,821,575	+		DZA65_RS13155	0.90	-0.4
2,821,575	+		DZA65_RS13155	0.90	+0.1
2,821,575	+		DZA65_RS13155	0.90	-1.2
2,821,575	+		DZA65_RS13155	0.90	+0.9
2,821,575	+		DZA65_RS13155	0.90	+0.3
2,821,576	-		DZA65_RS13155	0.90	-0.9
2,821,576	-		DZA65_RS13155	0.90	-0.6
2,821,576	-				+1.5
2,821,576	-		DZA65_RS13155	0.90	+1.4
2,821,576	-		DZA65_RS13155	0.90	+0.7
2,821,576	-		DZA65_RS13155	0.90	+0.9
2,821,576	-		DZA65_RS13155	0.90	+1.7
2,821,576	-		DZA65_RS13155	0.90	+0.0
2,821,762	-				+0.3
2,821,762	-				-0.5
2,821,762	-				+0.6
2,821,767	+				+0.5
2,821,767	+				+0.1
2,821,767	+				+0.1
2,821,767	+				-2.9
2,821,768	-				-1.5
2,821,768	-				-0.9
2,821,768	-				+0.1
2,821,837	+				-1.9
2,821,887	-		DZA65_RS13160	0.10	-1.9
2,821,887	-		DZA65_RS13160	0.10	-1.0
2,821,887	-		DZA65_RS13160	0.10	+2.5
2,821,887	-		DZA65_RS13160	0.10	-0.6
2,821,967	-				+0.5
2,821,979	+				-0.7
2,821,979	+				-0.1
2,821,980	-				-1.2
2,821,988	+				-0.9
2,822,039	+				+0.5
2,822,080	+				-0.4
2,822,081	-				-0.1
2,822,155	+				-0.5
2,822,156	-				-0.0
2,822,250	+		DZA65_RS13165	0.11	-1.0
2,822,250	+		DZA65_RS13165	0.11	-0.2
2,822,251	-		DZA65_RS13165	0.11	-0.0
2,822,251	-		DZA65_RS13165	0.11	+0.1
2,822,251	-		DZA65_RS13165	0.11	-1.5
2,822,528	+		DZA65_RS13165	0.71	-1.1
2,822,528	+		DZA65_RS13165	0.71	-0.5
2,822,528	+		DZA65_RS13165	0.71	-1.2
2,822,528	+		DZA65_RS13165	0.71	-1.7
2,822,528	+		DZA65_RS13165	0.71	-0.2
2,822,528	+		DZA65_RS13165	0.71	-0.5
2,822,528	+		DZA65_RS13165	0.71	-2.9
2,822,529	-		DZA65_RS13165	0.71	+1.3
2,822,529	-		DZA65_RS13165	0.71	+0.4
2,822,529	-		DZA65_RS13165	0.71	-0.5
2,822,529	-		DZA65_RS13165	0.71	-0.7
2,822,529	-		DZA65_RS13165	0.71	-0.3
2,822,529	-		DZA65_RS13165	0.71	+0.5
2,822,529	-		DZA65_RS13165	0.71	-1.1
2,822,529	-		DZA65_RS13165	0.71	-0.5
2,822,529	-		DZA65_RS13165	0.71	-0.8
2,822,529	-		DZA65_RS13165	0.71	+0.3
2,822,543	+		DZA65_RS13165	0.74	-0.9
2,822,543	+		DZA65_RS13165	0.74	+0.6
2,822,543	+		DZA65_RS13165	0.74	-1.7
2,822,543	+		DZA65_RS13165	0.74	-1.6
2,822,544	-		DZA65_RS13165	0.74	-0.4
2,822,544	-		DZA65_RS13165	0.74	-0.6
2,822,576	+		DZA65_RS13165	0.81	+0.4
2,822,576	+		DZA65_RS13165	0.81	+0.3
2,822,576	+		DZA65_RS13165	0.81	-0.5
2,822,577	-		DZA65_RS13165	0.82	-2.5
2,822,577	-		DZA65_RS13165	0.82	-0.3
2,822,577	-		DZA65_RS13165	0.82	-0.2
2,822,577	-		DZA65_RS13165	0.82	+0.3
2,822,577	-		DZA65_RS13165	0.82	-0.0
2,822,585	+		DZA65_RS13165	0.83	+1.5
2,822,585	+		DZA65_RS13165	0.83	-0.5
2,822,631	+				+0.7
2,822,650	-				-0.5
2,822,650	-				+0.4
2,822,689	-				-0.4
2,822,725	+				-0.8
2,822,729	+				+1.1
2,822,730	-				+0.0
2,822,742	+				+1.5
2,822,743	-				-0.5
2,822,743	-				-1.2
2,822,743	-				-1.5
2,822,746	+				+0.9
2,822,746	+				-0.5
2,822,747	-				+0.1
2,822,759	+				-2.6
2,822,866	+				-0.2
2,822,866	+				+0.1
2,822,866	+				+0.2
2,822,866	+				-0.5
2,822,866	+				+0.8
2,822,867	-				+0.8
2,822,867	-				+0.3
2,822,867	-				-0.9
2,822,867	-				+0.1
2,822,868	+				-0.7
2,822,868	+				-1.9
2,822,868	+				+0.3
2,822,869	-				+0.8
2,822,869	-				-0.9
2,822,869	-				-0.1
2,822,887	-				-0.0
2,822,905	+				-0.2
2,822,928	+				+0.8
2,822,928	+				+0.5
2,822,928	+				+0.2
2,822,928	+				-0.2
2,822,928	+				+1.0
2,822,928	+				+0.1
2,822,929	-				+1.1
2,822,929	-				-0.0
2,822,929	-				-0.6
2,822,929	-				-0.1
2,822,929	-				+1.7
2,822,930	+				-0.1
2,822,930	+				-0.3
2,822,930	+				-0.7
2,822,930	+				-0.2
2,822,931	-				-1.5
2,822,931	-				-1.7
2,822,931	-				+0.1
2,822,931	-				-1.7
2,822,931	-				-0.7
2,822,931	-				-0.9
2,822,931	-				-1.0
2,823,007	-				-0.7
2,823,007	-				-0.3
2,823,048	+		DZA65_RS13170	0.12	-0.1
2,823,049	-		DZA65_RS13170	0.13	+0.1
2,823,090	+		DZA65_RS13170	0.17	-0.6
2,823,090	+		DZA65_RS13170	0.17	+0.3
2,823,090	+		DZA65_RS13170	0.17	-0.1
2,823,091	-		DZA65_RS13170	0.17	+0.9
2,823,091	-		DZA65_RS13170	0.17	-0.1
2,823,117	-		DZA65_RS13170	0.19	+0.4
2,823,227	+		DZA65_RS13170	0.30	+1.3
2,823,227	+		DZA65_RS13170	0.30	-0.7
2,823,227	+		DZA65_RS13170	0.30	-0.9
2,823,227	+		DZA65_RS13170	0.30	-1.2
2,823,228	-		DZA65_RS13170	0.30	-1.9
2,823,264	-		DZA65_RS13170	0.34	+0.8
2,823,285	+		DZA65_RS13170	0.36	+0.1
2,823,286	-		DZA65_RS13170	0.36	-0.9
2,823,286	-		DZA65_RS13170	0.36	-0.5
2,823,286	-		DZA65_RS13170	0.36	-0.5
2,823,286	-		DZA65_RS13170	0.36	+0.1
2,823,286	-		DZA65_RS13170	0.36	+0.3
2,823,286	-		DZA65_RS13170	0.36	-0.5
2,823,286	-		DZA65_RS13170	0.36	-0.9
2,823,286	-		DZA65_RS13170	0.36	-0.9
2,823,286	-				+1.5
2,823,286	-		DZA65_RS13170	0.36	-0.1
2,823,286	-		DZA65_RS13170	0.36	+0.1
2,823,373	-		DZA65_RS13170	0.45	+0.4
2,823,419	+		DZA65_RS13170	0.49	+0.6
2,823,420	-		DZA65_RS13170	0.49	-0.9
2,823,420	-		DZA65_RS13170	0.49	-0.9
2,823,446	-		DZA65_RS13170	0.52	+0.4
2,823,446	-		DZA65_RS13170	0.52	-1.7
2,823,449	+		DZA65_RS13170	0.52	+1.1
2,823,449	+		DZA65_RS13170	0.52	-0.5
2,823,450	-		DZA65_RS13170	0.52	-0.5