Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12660

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,708,412	-		DZA65_RS12650	0.67	-0.3
2,708,412	-		DZA65_RS12650	0.67	+0.5
2,708,479	-		DZA65_RS12650	0.73	-0.5
2,708,479	-		DZA65_RS12650	0.73	-0.6
2,708,573	+		DZA65_RS12650	0.81	+0.5
2,708,619	+		DZA65_RS12650	0.85	+0.6
2,708,619	+		DZA65_RS12650	0.85	-0.0
2,708,619	+		DZA65_RS12650	0.85	-1.2
2,708,619	+		DZA65_RS12650	0.85	-1.2
2,708,619	+		DZA65_RS12650	0.85	-0.3
2,708,620	-		DZA65_RS12650	0.85	+0.0
2,708,691	+				-0.6
2,708,691	+				-0.5
2,708,706	+				+0.2
2,708,706	+				-0.1
2,708,707	-				+0.3
2,708,707	-				+0.1
2,708,707	-				-1.0
2,708,707	-				-0.1
2,708,707	-				-0.6
2,708,707	-				-1.4
2,708,751	-				+1.1
2,708,763	+				-0.1
2,708,763	+				+0.4
2,708,763	+				-0.1
2,708,763	+				-0.5
2,708,764	-				+0.0
2,708,764	-				-0.5
2,708,796	+				-0.9
2,708,827	+				-0.2
2,708,833	+				-0.6
2,708,837	+				+0.6
2,708,838	-				-0.6
2,708,867	+		DZA65_RS12655	0.10	-0.7
2,708,867	+		DZA65_RS12655	0.10	+0.9
2,708,867	+		DZA65_RS12655	0.10	+0.3
2,708,867	+		DZA65_RS12655	0.10	-0.3
2,708,867	+		DZA65_RS12655	0.10	-0.1
2,708,867	+		DZA65_RS12655	0.10	+0.1
2,708,867	+		DZA65_RS12655	0.10	+0.8
2,708,867	+		DZA65_RS12655	0.10	-1.5
2,708,868	-		DZA65_RS12655	0.11	+0.8
2,708,868	-		DZA65_RS12655	0.11	+0.1
2,708,868	-		DZA65_RS12655	0.11	-0.6
2,708,925	-		DZA65_RS12655	0.22	+1.1
2,709,039	-				-0.9
2,709,087	-		DZA65_RS12655	0.53	-0.4
2,709,211	+		DZA65_RS12655	0.77	+0.3
2,709,211	+		DZA65_RS12655	0.77	-0.7
2,709,211	+		DZA65_RS12655	0.77	+0.4
2,709,211	+		DZA65_RS12655	0.77	-1.1
2,709,211	+		DZA65_RS12655	0.77	+0.5
2,709,211	+		DZA65_RS12655	0.77	-0.6
2,709,211	+		DZA65_RS12655	0.77	-0.2
2,709,211	+		DZA65_RS12655	0.77	+0.5
2,709,212	-		DZA65_RS12655	0.77	-1.8
2,709,212	-		DZA65_RS12655	0.77	-0.8
2,709,212	-		DZA65_RS12655	0.77	-0.2
2,709,212	-		DZA65_RS12655	0.77	-1.0
2,709,212	-		DZA65_RS12655	0.77	+0.4
2,709,212	-		DZA65_RS12655	0.77	+0.9
2,709,212	-		DZA65_RS12655	0.77	-0.2
2,709,212	-		DZA65_RS12655	0.77	+0.7
2,709,212	-		DZA65_RS12655	0.77	+0.8
2,709,212	-		DZA65_RS12655	0.77	-0.1
2,709,215	+		DZA65_RS12655	0.77	-0.2
2,709,215	+		DZA65_RS12655	0.77	+0.5
2,709,215	+		DZA65_RS12655	0.77	-1.0
2,709,215	+		DZA65_RS12655	0.77	-0.8
2,709,216	-		DZA65_RS12655	0.78	-0.9
2,709,216	-		DZA65_RS12655	0.78	-0.2
2,709,216	-		DZA65_RS12655	0.78	-1.2
2,709,216	-		DZA65_RS12655	0.78	-0.3
2,709,216	-		DZA65_RS12655	0.78	-0.1
2,709,216	-		DZA65_RS12655	0.78	-1.3
2,709,218	+		DZA65_RS12655	0.78	-0.1
2,709,218	+				+1.1
2,709,218	+		DZA65_RS12655	0.78	-0.9
2,709,218	+		DZA65_RS12655	0.78	+0.3
2,709,218	+		DZA65_RS12655	0.78	+0.5
2,709,218	+		DZA65_RS12655	0.78	-0.1
2,709,219	-		DZA65_RS12655	0.78	-0.9
2,709,219	-		DZA65_RS12655	0.78	-0.7
2,709,219	-		DZA65_RS12655	0.78	+1.1
2,709,219	-				+0.1
2,709,262	+		DZA65_RS12655	0.87	-0.5
2,709,262	+				-1.2
2,709,262	+		DZA65_RS12655	0.87	-0.2
2,709,578	+		DZA65_RS12660	0.64	-0.2
2,709,578	+		DZA65_RS12660	0.64	-0.7
2,709,579	-		DZA65_RS12660	0.64	-0.7
2,709,579	-		DZA65_RS12660	0.64	+1.1
2,709,579	-		DZA65_RS12660	0.64	-1.5
2,709,579	-		DZA65_RS12660	0.64	-0.7
2,709,787	-		DZA65_RS12665	0.69	-0.2
2,709,807	-		DZA65_RS12665	0.82	+0.2
2,709,826	+				+1.1
2,709,826	+				-1.0
2,709,826	+				+1.4
2,709,827	-				+0.1
2,709,827	-				+0.1
2,709,832	+				+0.9
2,709,832	+				-1.4
2,709,833	-				+0.3
2,709,850	+				-1.0
2,709,850	+				-0.5
2,709,851	-				+1.3
2,709,851	-				-0.4
2,709,851	-				+0.6
2,709,883	+				+0.4
2,709,883	+				-0.5
2,709,932	+				-0.4
2,709,933	-				+0.4
2,709,933	-				+1.1
2,710,065	-		DZA65_RS12670	0.22	+0.1
2,710,065	-		DZA65_RS12670	0.22	+0.6
2,710,145	+		DZA65_RS12670	0.29	+0.2
2,710,277	+		DZA65_RS12670	0.41	-0.4
2,710,277	+		DZA65_RS12670	0.41	-0.4
2,710,277	+		DZA65_RS12670	0.41	+0.6
2,710,277	+		DZA65_RS12670	0.41	-0.3
2,710,277	+		DZA65_RS12670	0.41	-1.4
2,710,277	+		DZA65_RS12670	0.41	-0.6
2,710,277	+				+0.4
2,710,277	+		DZA65_RS12670	0.41	-2.1
2,710,277	+		DZA65_RS12670	0.41	+0.5
2,710,278	-		DZA65_RS12670	0.41	+0.5
2,710,278	-		DZA65_RS12670	0.41	-0.9
2,710,278	-		DZA65_RS12670	0.41	-0.9
2,710,278	-		DZA65_RS12670	0.41	+0.8
2,710,278	-		DZA65_RS12670	0.41	+1.5
2,710,395	+		DZA65_RS12670	0.52	+0.4
2,710,396	-		DZA65_RS12670	0.52	-0.6
2,710,554	+		DZA65_RS12670	0.67	+0.1
2,710,554	+		DZA65_RS12670	0.67	+1.4
2,710,679	-		DZA65_RS12670	0.78	+0.3