Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,696,284	-		DZA65_RS12585	0.34	+0.1
2,696,371	-		DZA65_RS12585	0.53	+1.1
2,696,394	+		DZA65_RS12585	0.58	-1.6
2,696,395	-		DZA65_RS12585	0.58	-0.5
2,696,407	-		DZA65_RS12585	0.60	-1.9
2,696,497	+		DZA65_RS12585	0.80	-0.9
2,696,497	+		DZA65_RS12585	0.80	-0.1
2,696,498	-		DZA65_RS12585	0.80	+1.8
2,696,498	-		DZA65_RS12585	0.80	-0.0
2,696,498	-		DZA65_RS12585	0.80	+0.9
2,696,498	-		DZA65_RS12585	0.80	-0.3
2,696,498	-		DZA65_RS12585	0.80	-0.5
2,696,498	-		DZA65_RS12585	0.80	+0.8
2,696,498	-		DZA65_RS12585	0.80	-0.7
2,696,548	+				-1.9
2,696,548	+				-0.8
2,696,548	+				-0.5
2,696,548	+				-1.0
2,696,548	+				-1.9
2,696,548	+				+1.5
2,696,548	+				+1.1
2,696,548	+				-0.3
2,696,549	-				-0.2
2,696,549	-				+0.7
2,696,549	-				-0.4
2,696,549	-				-0.4
2,696,549	-				+0.5
2,696,549	-				-1.1
2,696,565	+				-0.3
2,696,600	+				+0.8
2,696,601	-				-0.1
2,696,601	-				-1.7
2,696,601	-				-1.6
2,696,601	-				-0.6
2,696,601	-				+0.5
2,696,668	-				-0.0
2,696,680	-				-0.2
2,696,719	+				-0.9
2,696,723	-				-0.5
2,696,826	-				-2.2
2,696,828	+				-0.6
2,696,828	+				+0.7
2,696,836	+				-1.1
2,696,836	+				-0.1
2,696,837	-				-1.1
2,696,837	-				+0.7
2,696,847	+				-0.5
2,696,968	+				-0.2
2,697,238	+				-0.6
2,697,238	+				-0.5
2,697,238	+				-1.3
2,697,238	+				+0.7
2,697,238	+				+0.3
2,697,238	+				-0.7
2,697,238	+				-0.1
2,697,238	+				-1.0
2,697,238	+				-2.8
2,697,238	+				+0.1
2,697,238	+				-0.2
2,697,238	+				-0.5
2,697,238	+				-0.3
2,697,238	+				-1.2
2,697,239	-				+0.1
2,697,239	-				-1.7
2,697,239	-				-0.2
2,697,239	-				+0.5
2,697,239	-				-0.0
2,697,239	-				-0.5
2,697,239	-				+0.2
2,697,239	-				+0.2
2,697,239	-				-0.5
2,697,239	-				+0.2
2,697,239	-				-0.7
2,697,239	-				+0.4
2,697,239	-				-1.3
2,697,239	-				-0.6
2,697,239	-				-0.4
2,697,239	-				-0.5
2,697,239	-				+1.4
2,697,239	-				-1.9
2,697,239	-				+0.8
2,697,239	-				-2.6
2,697,242	+				-1.1
2,697,242	+				-0.9
2,697,242	+				-0.5
2,697,242	+				+1.6
2,697,242	+				-0.5
2,697,242	+				-0.3
2,697,242	+				+0.3
2,697,242	+				-0.1
2,697,242	+				-2.5
2,697,242	+				-1.5
2,697,243	-				+0.5
2,697,243	-				+0.6
2,697,243	-				-0.9
2,697,243	-				+1.0
2,697,243	-				+0.6
2,697,243	-				+1.8
2,697,248	+				-0.1
2,697,248	+				-0.3
2,697,249	-				-0.8
2,697,249	-				-1.2
2,697,249	-				+0.4
2,697,249	-				-0.2
2,697,249	-				-0.6
2,697,435	+		DZA65_RS12590	0.33	-0.9
2,697,436	-		DZA65_RS12590	0.33	-0.5
2,697,447	+		DZA65_RS12590	0.35	+0.3
2,697,447	+		DZA65_RS12590	0.35	+0.6
2,697,447	+		DZA65_RS12590	0.35	-0.2
2,697,448	-		DZA65_RS12590	0.35	-1.2
2,697,464	-				+0.5
2,697,464	-		DZA65_RS12590	0.37	+1.3
2,697,484	+		DZA65_RS12590	0.40	-0.4
2,697,488	+		DZA65_RS12590	0.41	+0.9
2,697,489	-		DZA65_RS12590	0.41	+2.3
2,697,489	-				+0.1
2,697,489	-		DZA65_RS12590	0.41	+0.4
2,697,489	-		DZA65_RS12590	0.41	+0.4
2,697,567	-		DZA65_RS12590	0.53	+0.5
2,697,709	+		DZA65_RS12590	0.75	+0.1
2,697,710	-		DZA65_RS12590	0.75	+0.5
2,697,710	-		DZA65_RS12590	0.75	+0.1
2,697,710	-		DZA65_RS12590	0.75	-0.9
2,697,817	+				+0.4
2,697,818	-				-1.5
2,697,838	-				-0.5
2,697,871	-				-0.9
2,698,055	+		DZA65_RS12595	0.52	-1.4
2,698,055	+		DZA65_RS12595	0.52	-1.5
2,698,056	-		DZA65_RS12595	0.53	+0.6
2,698,056	-		DZA65_RS12595	0.53	-1.1
2,698,075	+		DZA65_RS12595	0.58	-1.0
2,698,075	+		DZA65_RS12595	0.58	+0.2
2,698,075	+		DZA65_RS12595	0.58	-0.5
2,698,075	+		DZA65_RS12595	0.58	+0.2
2,698,075	+		DZA65_RS12595	0.58	-0.9
2,698,075	+		DZA65_RS12595	0.58	+1.3
2,698,076	-		DZA65_RS12595	0.58	+0.4
2,698,076	-		DZA65_RS12595	0.58	-0.5
2,698,076	-		DZA65_RS12595	0.58	-0.6
2,698,076	-		DZA65_RS12595	0.58	-0.2
2,698,076	-		DZA65_RS12595	0.58	+1.6
2,698,076	-		DZA65_RS12595	0.58	+0.3
2,698,139	-		DZA65_RS12595	0.76	-0.4
2,698,161	+		DZA65_RS12595	0.83	-0.2
2,698,243	-				-1.8
2,698,243	-				-1.8
2,698,243	-				-0.9
2,698,251	+				+0.3
2,698,295	+				-1.9
2,698,296	-				-0.5
2,698,328	+		DZA65_RS12600	0.11	+0.5
2,698,328	+		DZA65_RS12600	0.11	-2.1
2,698,328	+		DZA65_RS12600	0.11	+0.8
2,698,328	+		DZA65_RS12600	0.11	-2.1
2,698,328	+		DZA65_RS12600	0.11	-0.8
2,698,329	-		DZA65_RS12600	0.11	-0.5
2,698,550	-		DZA65_RS12600	0.36	-1.5
2,698,606	+		DZA65_RS12600	0.42	-1.6
2,698,619	+		DZA65_RS12600	0.43	-0.6
2,698,619	+		DZA65_RS12600	0.43	+0.4
2,698,619	+		DZA65_RS12600	0.43	+0.5
2,698,619	+		DZA65_RS12600	0.43	-0.1
2,698,619	+		DZA65_RS12600	0.43	-0.4
2,698,619	+		DZA65_RS12600	0.43	+1.4
2,698,620	-		DZA65_RS12600	0.43	-0.6
2,698,656	-		DZA65_RS12600	0.47	-0.1
2,698,846	+		DZA65_RS12600	0.68	+0.6
2,698,868	+		DZA65_RS12600	0.71	+0.5
2,698,869	-		DZA65_RS12600	0.71	+0.2
2,698,869	-		DZA65_RS12600	0.71	-0.4
2,698,869	-		DZA65_RS12600	0.71	+1.1