Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12345

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,635,396	-		DZA65_RS12340	0.31	-0.2
2,635,417	-		DZA65_RS12340	0.32	+0.7
2,635,417	-		DZA65_RS12340	0.32	+1.0
2,635,417	-		DZA65_RS12340	0.32	-0.6
2,635,438	+		DZA65_RS12340	0.34	-1.4
2,635,438	+		DZA65_RS12340	0.34	+0.3
2,635,439	-		DZA65_RS12340	0.34	+0.4
2,635,439	-		DZA65_RS12340	0.34	+0.1
2,635,581	+		DZA65_RS12340	0.46	+0.4
2,635,582	-		DZA65_RS12340	0.46	-0.3
2,635,673	+		DZA65_RS12340	0.54	-0.2
2,635,673	+		DZA65_RS12340	0.54	+0.9
2,635,674	-		DZA65_RS12340	0.54	-0.7
2,635,719	+		DZA65_RS12340	0.57	+2.1
2,635,720	-		DZA65_RS12340	0.57	+1.8
2,635,740	-		DZA65_RS12340	0.59	-2.5
2,636,168	+				-0.1
2,636,199	+				-0.4
2,636,200	-				-1.1
2,636,200	-				+0.2
2,636,200	-				+0.2
2,636,200	-				-0.3
2,636,200	-				-1.1
2,636,221	+				+0.9
2,636,221	+				-2.2
2,636,221	+				-0.8
2,636,221	+				-0.2
2,636,221	+				+0.4
2,636,222	-				+0.6
2,636,334	+				+0.8
2,636,536	+		DZA65_RS12345	0.21	-0.9
2,636,537	-		DZA65_RS12345	0.21	-0.7
2,636,612	+		DZA65_RS12345	0.31	-0.5
2,636,613	-		DZA65_RS12345	0.31	-1.5
2,636,613	-		DZA65_RS12345	0.31	-0.5
2,636,638	-				+0.7
2,636,641	-		DZA65_RS12345	0.34	-0.6
2,636,954	+		DZA65_RS12345	0.74	+0.1
2,636,954	+		DZA65_RS12345	0.74	-1.6
2,636,954	+		DZA65_RS12345	0.74	+0.1
2,636,954	+		DZA65_RS12345	0.74	-0.2
2,636,955	-		DZA65_RS12345	0.75	+1.1
2,637,117	+				-0.7
2,637,117	+				-0.7
2,637,117	+				+0.1
2,637,118	-				-0.2
2,637,118	-				-0.8
2,637,166	+				+0.2
2,637,166	+				+0.1
2,637,166	+				+0.3
2,637,167	-				-1.1
2,637,167	-				-0.6
2,637,167	-				-0.4
2,637,242	+				+0.6
2,637,242	+				-0.0
2,637,242	+				-0.1
2,637,242	+				-0.6
2,637,242	+				-0.1
2,637,243	-				-0.0
2,637,244	+				-0.7
2,637,244	+				-2.1
2,637,244	+				-0.3
2,637,245	-				-0.0
2,637,245	-				+0.5
2,637,334	+				+0.1
2,637,334	+				+0.1
2,637,334	+				-0.5
2,637,394	-		DZA65_RS12350	0.13	-0.5
2,637,630	+		DZA65_RS12350	0.27	+1.1
2,637,630	+		DZA65_RS12350	0.27	+3.7
2,637,630	+		DZA65_RS12350	0.27	+0.4
2,637,630	+		DZA65_RS12350	0.27	+0.3
2,637,630	+		DZA65_RS12350	0.27	-0.6
2,637,630	+		DZA65_RS12350	0.27	-1.1
2,637,630	+		DZA65_RS12350	0.27	-0.3
2,637,631	-		DZA65_RS12350	0.27	-0.0
2,637,631	-		DZA65_RS12350	0.27	-1.7
2,637,631	-		DZA65_RS12350	0.27	+0.4
2,637,631	-		DZA65_RS12350	0.27	-0.3
2,637,631	-		DZA65_RS12350	0.27	+1.5
2,637,755	+		DZA65_RS12350	0.35	-0.2
2,637,755	+		DZA65_RS12350	0.35	+0.4
2,637,756	-		DZA65_RS12350	0.35	-0.1
2,637,759	-		DZA65_RS12350	0.35	+0.3
2,637,759	-		DZA65_RS12350	0.35	+0.1
2,637,996	-		DZA65_RS12350	0.49	-1.3
2,637,996	-		DZA65_RS12350	0.49	-0.4
2,638,127	+		DZA65_RS12350	0.57	-0.1
2,638,129	+		DZA65_RS12350	0.57	-1.2
2,638,129	+		DZA65_RS12350	0.57	+0.5
2,638,129	+		DZA65_RS12350	0.57	-1.0
2,638,129	+		DZA65_RS12350	0.57	+0.8
2,638,130	-		DZA65_RS12350	0.57	+0.3