Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,586,524	-				-0.6
2,586,540	-				+0.7
2,586,540	-				+0.7
2,586,554	+				-0.7
2,586,554	+				-0.7
2,586,555	-				-1.7
2,586,557	+				+0.4
2,586,557	+				-0.6
2,586,558	-				+1.1
2,586,589	-				-0.2
2,586,692	-				-1.2
2,586,705	+				+1.1
2,586,705	+				-0.2
2,586,706	-				-1.2
2,586,723	-				+0.8
2,586,754	+				-0.3
2,586,754	+				-0.1
2,586,754	+				-0.7
2,586,755	-				-0.8
2,586,825	+				+1.1
2,586,826	-				-0.4
2,586,835	-				+0.5
2,586,837	+				-1.1
2,586,837	+				-0.2
2,586,852	+				-1.5
2,586,852	+				-0.7
2,586,870	+				-0.1
2,586,870	+				-1.7
2,586,870	+				+0.9
2,586,870	+				+0.1
2,586,870	+				+0.7
2,586,871	-				-0.9
2,586,871	-				-0.5
2,586,878	+				-0.9
2,586,947	+		DZA65_RS12105	0.11	-0.0
2,586,967	-		DZA65_RS12105	0.16	-0.9
2,586,978	-		DZA65_RS12105	0.19	-0.0
2,586,990	-		DZA65_RS12105	0.22	+0.3
2,587,002	-		DZA65_RS12105	0.25	-0.7
2,587,019	+		DZA65_RS12105	0.29	+0.0
2,587,019	+		DZA65_RS12105	0.29	-0.2
2,587,019	+		DZA65_RS12105	0.29	+0.0
2,587,020	-		DZA65_RS12105	0.30	-0.8
2,587,060	-		DZA65_RS12105	0.40	-1.5
2,587,086	+		DZA65_RS12105	0.46	-0.5
2,587,086	+		DZA65_RS12105	0.46	-0.1
2,587,087	-		DZA65_RS12105	0.46	-0.3
2,587,087	-		DZA65_RS12105	0.46	-0.4
2,587,167	+		DZA65_RS12105	0.67	-1.7
2,587,167	+		DZA65_RS12105	0.67	-0.3
2,587,168	-		DZA65_RS12105	0.67	-1.7
2,587,168	-		DZA65_RS12105	0.67	-1.0
2,587,169	+		DZA65_RS12105	0.67	-0.3
2,587,296	+				-0.2
2,587,296	+				+0.8
2,587,296	+				-1.2
2,587,296	+				-0.6
2,587,297	-				-0.1
2,587,297	-				+0.5
2,587,297	-				-0.9
2,587,297	-				+0.5
2,587,337	-				-0.1
2,587,397	+				-0.3
2,587,397	+				-1.0
2,587,398	-				-0.1
2,587,398	-				-2.2
2,587,480	+				+0.0
2,587,774	+		DZA65_RS12110	0.29	-0.1
2,587,784	+		DZA65_RS12110	0.30	+0.5
2,587,785	-		DZA65_RS12110	0.30	-0.2
2,587,851	+		DZA65_RS12110	0.36	+1.1
2,587,852	-		DZA65_RS12110	0.36	-0.5
2,587,852	-		DZA65_RS12110	0.36	-0.2
2,587,852	-		DZA65_RS12110	0.36	-1.0
2,588,121	-		DZA65_RS12110	0.62	-1.6
2,588,178	-		DZA65_RS12110	0.68	-0.1
2,588,363	+		DZA65_RS12110	0.86	+0.3
2,588,363	+		DZA65_RS12110	0.86	-0.6
2,588,363	+		DZA65_RS12110	0.86	-0.4
2,588,363	+		DZA65_RS12110	0.86	+1.3
2,588,363	+		DZA65_RS12110	0.86	-1.8
2,588,363	+		DZA65_RS12110	0.86	-1.1
2,588,364	-		DZA65_RS12110	0.86	-0.8
2,588,364	-		DZA65_RS12110	0.86	-2.8
2,588,364	-		DZA65_RS12110	0.86	+0.4
2,588,364	-		DZA65_RS12110	0.86	-0.4
2,588,364	-		DZA65_RS12110	0.86	-0.5
2,588,385	-		DZA65_RS12110	0.88	+0.1
2,588,385	-		DZA65_RS12110	0.88	-1.1
2,588,492	+				-0.6
2,588,493	-				-1.0
2,588,493	-				-0.2
2,588,493	-				-0.4
2,588,495	+				-0.6
2,588,495	+				-0.1
2,588,495	+				-0.7
2,588,495	+				+0.2
2,588,495	+				-0.2
2,588,504	+				+0.2
2,588,543	+				+0.6
2,588,544	-				-0.6
2,588,544	-				-0.1
2,588,707	+		DZA65_RS12115	0.10	+0.5
2,588,775	-		DZA65_RS12115	0.27	-0.7
2,588,775	-		DZA65_RS12115	0.27	-0.5
2,588,775	-		DZA65_RS12115	0.27	-0.4
2,588,780	+		DZA65_RS12115	0.28	+0.0
2,588,912	+		DZA65_RS12115	0.60	+0.2
2,588,913	-		DZA65_RS12115	0.60	+0.0
2,588,956	-		DZA65_RS12115	0.71	-0.2
2,589,033	+		DZA65_RS12115	0.90	+0.3
2,589,033	+		DZA65_RS12115	0.90	+0.9
2,589,034	-		DZA65_RS12115	0.90	+0.4
2,589,034	-		DZA65_RS12115	0.90	+0.2
2,589,135	-		DZA65_RS12120	0.33	-0.2
2,589,281	-				-0.1
2,589,281	-				+1.5
2,589,281	-				-0.1
2,589,356	+				+0.1
2,589,356	+				-0.4
2,589,357	-				+0.6
2,589,357	-				-0.5
2,589,357	-				-0.2
2,589,357	-				-1.8
2,589,357	-				-2.9
2,589,357	-				+0.1
2,589,357	-				-1.2
2,589,357	-				-0.7