Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12005

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,553,665	+				-0.9
2,553,665	+				+0.5
2,553,665	+				+1.7
2,553,665	+				-0.5
2,553,665	+				-0.3
2,553,665	+				+0.8
2,553,665	+				-0.4
2,553,666	-				-0.1
2,553,666	-				-0.5
2,553,666	-				-1.1
2,553,666	-				-0.4
2,553,666	-				-0.6
2,553,666	-				-0.1
2,553,666	-				-1.7
2,553,666	-				-0.1
2,553,666	-				-0.2
2,553,666	-				-0.6
2,553,694	-				+0.1
2,553,694	-				+0.4
2,553,694	-				-0.3
2,553,694	-				-0.8
2,553,694	-				+1.0
2,554,343	-				+0.5
2,554,343	-				-0.2
2,554,347	-				-0.1
2,554,347	-				-1.2
2,554,347	-				+0.0
2,554,347	-				+1.1
2,554,347	-				-1.2
2,554,347	-				+2.1
2,554,347	-				-1.4
2,554,350	-				-0.1
2,554,566	-				+0.3
2,554,612	+				-0.9
2,554,625	+				+0.9
2,554,625	+				+1.1
2,554,650	-				-0.2
2,554,668	+				+0.1
2,554,669	-				-1.2
2,554,672	+				-0.9
2,554,672	+				-0.3
2,554,673	-				-0.9
2,554,673	-				-0.2
2,554,676	-				-0.3
2,554,676	-				+0.7
2,554,697	-		DZA65_RS12005	0.13	-0.9
2,554,697	-		DZA65_RS12005	0.13	-1.8
2,554,702	+		DZA65_RS12005	0.14	+0.4
2,554,703	-		DZA65_RS12005	0.14	+0.9
2,554,732	+		DZA65_RS12005	0.19	-0.1
2,554,732	+		DZA65_RS12005	0.19	+0.8
2,554,732	+		DZA65_RS12005	0.19	+0.5
2,554,733	-		DZA65_RS12005	0.19	-0.0
2,554,733	-		DZA65_RS12005	0.19	+1.3
2,554,733	-		DZA65_RS12005	0.19	-0.5
2,554,769	+		DZA65_RS12005	0.26	+0.7
2,554,769	+		DZA65_RS12005	0.26	-1.7
2,554,769	+		DZA65_RS12005	0.26	-0.2
2,554,769	+		DZA65_RS12005	0.26	+1.1
2,554,770	-		DZA65_RS12005	0.26	+1.1
2,554,781	+		DZA65_RS12005	0.28	-0.4
2,554,781	+		DZA65_RS12005	0.28	-0.2
2,554,793	+		DZA65_RS12005	0.30	+0.1
2,554,809	-		DZA65_RS12005	0.33	+0.1
2,554,809	-		DZA65_RS12005	0.33	+0.8
2,554,889	+		DZA65_RS12005	0.48	-1.5
2,554,889	+		DZA65_RS12005	0.48	-0.1
2,554,890	-		DZA65_RS12005	0.48	-0.4
2,554,890	-		DZA65_RS12005	0.48	-0.1
2,554,897	-		DZA65_RS12005	0.50	-1.2
2,554,975	+		DZA65_RS12005	0.64	+1.2
2,554,975	+		DZA65_RS12005	0.64	-1.1
2,554,995	+		DZA65_RS12005	0.68	-0.1
2,554,995	+		DZA65_RS12005	0.68	-0.9
2,554,995	+		DZA65_RS12005	0.68	+0.9
2,555,005	+		DZA65_RS12005	0.70	-0.5
2,555,063	-		DZA65_RS12005	0.80	-0.4
2,555,085	-		DZA65_RS12005	0.84	+0.5
2,555,313	+				+1.1
2,555,319	-		DZA65_RS22895	0.37	+0.7
2,555,335	+		DZA65_RS22895	0.41	-2.4
2,555,369	-		DZA65_RS22895	0.48	+0.3
2,555,449	-		DZA65_RS22895	0.67	-2.2
2,555,461	-		DZA65_RS22895	0.70	-0.1
2,555,619	-				-1.1
2,555,740	-				-0.2
2,555,755	-				-1.6
2,555,810	-				-1.9
2,555,810	-				-0.5
2,555,871	+				+0.4
2,555,871	+				-0.4
2,555,871	+				-1.1
2,555,905	+				-0.1
2,555,905	+				-0.6
2,555,905	+				-2.6
2,555,905	+				-0.2
2,555,906	-				-1.4
2,555,910	-				+1.1
2,555,966	+				+0.7
2,555,977	-				+0.8
2,555,995	-				+1.1
2,556,012	+				+0.3
2,556,062	+				-0.1
2,556,066	+				-1.3
2,556,066	+				-0.7
2,556,066	+				-0.5
2,556,066	+				+0.0
2,556,066	+				-0.9
2,556,066	+				-0.6
2,556,067	-				-0.9
2,556,067	-				+0.1
2,556,067	-				+1.1
2,556,067	-				-1.5
2,556,067	-				+0.7