Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11620

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,478,909	+				+0.2
2,478,909	+				-0.8
2,478,910	-				+0.5
2,478,953	+				-1.9
2,478,953	+				-1.6
2,478,954	-				-0.1
2,478,954	-				-1.5
2,478,954	-				-1.0
2,478,971	+				-1.0
2,478,971	+				-0.4
2,478,972	-				-0.9
2,478,989	+				+0.1
2,478,990	-				+0.9
2,478,990	-				-0.9
2,478,990	-				-0.2
2,479,018	+				+0.1
2,479,018	+				-0.2
2,479,018	+				-0.3
2,479,018	+				-0.9
2,479,018	+				-0.6
2,479,018	+				-0.6
2,479,019	-				-0.0
2,479,019	-				-0.2
2,479,019	-				-0.5
2,479,019	-				-0.4
2,479,019	-				-0.1
2,479,044	+				+0.1
2,479,053	+				+0.1
2,479,053	+				-0.2
2,479,053	+				-0.5
2,479,054	-				-1.3
2,479,054	-				+0.0
2,479,054	-				+0.2
2,479,054	-				+0.2
2,479,062	+				-0.6
2,479,062	+				-1.7
2,479,062	+				-0.7
2,479,062	+				-0.1
2,479,062	+				+0.1
2,479,063	-				-0.3
2,479,063	-				+0.8
2,479,063	-				+0.0
2,479,063	-				-1.3
2,479,063	-				-2.1
2,479,069	+				-0.2
2,479,070	-				+0.7
2,479,085	+				+0.3
2,479,085	+				-1.0
2,479,085	+				-0.3
2,479,085	+				+1.8
2,479,086	-				-0.4
2,479,098	+				-0.8
2,479,098	+				-0.0
2,479,098	+				-0.7
2,479,099	-				-0.2
2,479,099	-				-0.4
2,479,099	-				-0.9
2,479,099	-				-0.1
2,479,099	-				-1.7
2,479,099	-				+0.2
2,479,106	-				-0.5
2,479,117	+				-0.9
2,479,873	-				-0.1
2,480,035	+				-1.7
2,480,035	+				+1.3
2,480,035	+				-0.5
2,480,035	+				-0.6
2,480,035	+				+0.2
2,480,036	-				-0.1
2,480,036	-				+0.1
2,480,036	-				-0.3
2,480,036	-				-0.2
2,480,036	-				-0.3
2,480,073	+				+0.6
2,480,074	-				+0.4
2,480,074	-				+0.1
2,480,074	-				-0.5
2,480,074	-				-0.3
2,480,074	-				+0.7
2,480,172	+		DZA65_RS11620	0.14	+0.1
2,480,173	-		DZA65_RS11620	0.15	-0.7
2,480,173	-		DZA65_RS11620	0.15	-1.2
2,480,185	-		DZA65_RS11620	0.15	-1.5
2,480,185	-		DZA65_RS11620	0.15	+0.1
2,480,385	+		DZA65_RS11620	0.26	-0.8
2,480,385	+		DZA65_RS11620	0.26	+0.6
2,480,386	-		DZA65_RS11620	0.26	+0.3
2,480,386	-		DZA65_RS11620	0.26	-1.1
2,480,483	+		DZA65_RS11620	0.31	+0.0
2,480,709	+		DZA65_RS11620	0.42	-0.5
2,480,709	+		DZA65_RS11620	0.42	-0.7
2,480,710	-		DZA65_RS11620	0.42	-2.1
2,480,710	-		DZA65_RS11620	0.42	-0.7
2,480,717	+		DZA65_RS11620	0.43	-0.5
2,480,723	+		DZA65_RS11620	0.43	-0.6
2,480,965	-		DZA65_RS11620	0.56	-0.2
2,480,965	-		DZA65_RS11620	0.56	-0.4
2,480,995	+		DZA65_RS11620	0.57	+0.3
2,480,995	+		DZA65_RS11620	0.57	+0.2
2,480,996	-		DZA65_RS11620	0.57	-0.6
2,481,039	+		DZA65_RS11620	0.60	-1.5
2,481,040	-		DZA65_RS11620	0.60	-0.3
2,481,090	-		DZA65_RS11620	0.62	-2.2
2,481,090	-		DZA65_RS11620	0.62	-0.0
2,481,130	+		DZA65_RS11620	0.64	+0.8
2,481,130	+		DZA65_RS11620	0.64	-0.2
2,481,131	-		DZA65_RS11620	0.64	-2.1
2,481,131	-		DZA65_RS11620	0.64	-1.0
2,481,197	+		DZA65_RS11620	0.68	+0.1
2,481,198	-		DZA65_RS11620	0.68	-0.7
2,481,198	-		DZA65_RS11620	0.68	-0.1
2,481,272	+		DZA65_RS11620	0.72	+0.4
2,481,272	+		DZA65_RS11620	0.72	-0.1
2,481,273	-		DZA65_RS11620	0.72	-0.3
2,481,273	-		DZA65_RS11620	0.72	-0.9
2,481,273	-		DZA65_RS11620	0.72	-1.2
2,481,273	-		DZA65_RS11620	0.72	+0.7
2,481,276	+		DZA65_RS11620	0.72	-0.5
2,481,276	+		DZA65_RS11620	0.72	-1.7
2,481,277	-		DZA65_RS11620	0.72	-0.9
2,481,277	-		DZA65_RS11620	0.72	-0.0
2,481,482	+		DZA65_RS11620	0.83	-0.7
2,481,561	-		DZA65_RS11620	0.87	-0.5
2,481,641	+				+0.5
2,481,642	-				-0.5
2,481,642	-				+0.1
2,481,836	-				-0.5
2,481,874	-				+0.2
2,481,956	+				-0.1
2,481,956	+				-1.5
2,481,957	-				-0.5
2,481,972	-				-0.0
2,482,070	+		DZA65_RS11625	0.15	+0.5
2,482,070	+		DZA65_RS11625	0.15	+0.3
2,482,071	-		DZA65_RS11625	0.15	-1.1
2,482,071	-		DZA65_RS11625	0.15	+0.9
2,482,071	-		DZA65_RS11625	0.15	+0.9
2,482,085	+		DZA65_RS11625	0.19	-2.1
2,482,085	+		DZA65_RS11625	0.19	-0.7
2,482,085	+		DZA65_RS11625	0.19	+0.4
2,482,086	-		DZA65_RS11625	0.19	+0.6
2,482,086	-		DZA65_RS11625	0.19	-1.8
2,482,088	+		DZA65_RS11625	0.20	-0.7
2,482,088	+		DZA65_RS11625	0.20	-0.9
2,482,088	+		DZA65_RS11625	0.20	+0.1
2,482,089	-		DZA65_RS11625	0.20	-0.9
2,482,089	-		DZA65_RS11625	0.20	+0.1
2,482,310	-		DZA65_RS11625	0.84	-0.9
2,482,547	+		DZA65_RS11630	0.69	-0.5
2,482,547	+		DZA65_RS11630	0.69	-1.3
2,482,547	+		DZA65_RS11630	0.69	-0.5
2,482,547	+		DZA65_RS11630	0.69	+0.2
2,482,547	+		DZA65_RS11630	0.69	-0.2
2,482,547	+		DZA65_RS11630	0.69	-0.2
2,482,547	+		DZA65_RS11630	0.69	-0.3
2,482,548	-		DZA65_RS11630	0.69	-1.7
2,482,548	-		DZA65_RS11630	0.69	+0.4
2,482,548	-		DZA65_RS11630	0.69	-1.3
2,482,548	-		DZA65_RS11630	0.69	+0.7
2,482,548	-		DZA65_RS11630	0.69	-0.1
2,482,595	-				-0.1
2,482,630	+				+2.1
2,482,631	-				-0.7
2,482,686	+				+0.3
2,482,686	+				+0.1
2,482,686	+				-0.6
2,482,686	+				-0.2
2,482,687	-				+0.1
2,482,687	-				-0.0
2,482,741	-				-0.5
2,482,741	-				+0.1
2,482,741	-				-0.0
2,482,746	+				-0.9
2,482,752	+				-0.2
2,482,752	+				+2.1
2,482,753	-				+0.7
2,482,771	+				-1.1
2,482,771	+				-1.5
2,482,771	+				+0.7
2,482,771	+				+0.5
2,482,772	-				-0.6
2,482,772	-				-0.3
2,482,786	+				-0.5