Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10685

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,262,652	+				+0.2
2,262,653	-				+1.1
2,262,673	-				+0.3
2,262,673	-				-0.4
2,262,675	+				-1.1
2,262,718	+		DZA65_RS10675	0.10	-0.1
2,262,719	-		DZA65_RS10675	0.11	-0.5
2,262,719	-		DZA65_RS10675	0.11	+0.5
2,262,719	-		DZA65_RS10675	0.11	+1.7
2,262,730	-		DZA65_RS10675	0.13	-0.6
2,262,769	-		DZA65_RS10675	0.23	-2.9
2,262,784	-				+0.5
2,262,847	+		DZA65_RS10675	0.43	-0.7
2,262,847	+		DZA65_RS10675	0.43	-3.0
2,262,847	+		DZA65_RS10675	0.43	+0.6
2,262,847	+		DZA65_RS10675	0.43	-1.1
2,262,848	-		DZA65_RS10675	0.43	-1.4
2,262,875	-		DZA65_RS10675	0.50	-0.2
2,262,878	+		DZA65_RS10675	0.50	+0.4
2,262,904	+		DZA65_RS10675	0.57	+0.8
2,262,905	-		DZA65_RS10675	0.57	-0.4
2,263,059	-				-0.0
2,263,081	+				-2.5
2,263,081	+				-2.1
2,263,081	+				-0.7
2,263,082	-				+0.0
2,263,082	-				+1.1
2,263,082	-				-1.8
2,263,083	+				-0.2
2,263,083	+				-0.9
2,263,083	+				+0.2
2,263,083	+				+0.8
2,263,120	+				-0.3
2,263,120	+				-0.3
2,263,121	-				-0.9
2,263,121	-				-0.1
2,263,190	+				+0.1
2,263,191	-				-0.4
2,263,197	+				+0.0
2,263,198	-				+1.0
2,263,293	+		DZA65_RS10680	0.50	+1.1
2,263,302	-		DZA65_RS10680	0.57	-0.6
2,263,302	-		DZA65_RS10680	0.57	+0.2
2,263,302	-		DZA65_RS10680	0.57	+0.0
2,263,334	+		DZA65_RS10680	0.83	-0.5
2,263,335	-		DZA65_RS10680	0.83	+0.8
2,263,335	-		DZA65_RS10680	0.83	+0.1
2,263,338	-		DZA65_RS10680	0.86	+0.1
2,263,357	-				+1.7
2,263,401	+				-0.4
2,263,425	+				+0.4
2,263,425	+				+0.0
2,263,426	-				-1.5
2,263,426	-				+2.1
2,263,524	+				-0.4
2,263,529	+				-0.5
2,263,529	+				+0.4
2,263,529	+				+0.3
2,263,530	-				-0.5
2,263,541	+				-0.6
2,263,545	+				+0.2
2,263,552	+				-0.3
2,263,553	-				+0.0
2,263,553	-				-0.2
2,263,587	+				+1.1
2,263,588	-				-0.6
2,263,588	-				+0.2
2,263,588	-				-0.7
2,263,591	+				+0.1
2,263,618	+				+0.4
2,263,622	+				-1.2
2,263,709	+		DZA65_RS10685	0.14	-0.4
2,263,792	-		DZA65_RS10685	0.28	-1.5
2,263,794	-		DZA65_RS10685	0.28	-0.5
2,263,794	-		DZA65_RS10685	0.28	-1.1
2,263,809	+		DZA65_RS10685	0.31	+0.4
2,263,828	+		DZA65_RS10685	0.34	+0.8
2,263,843	+		DZA65_RS10685	0.36	+0.2
2,263,975	+		DZA65_RS10685	0.58	-0.6
2,263,975	+				+0.5
2,263,975	+		DZA65_RS10685	0.58	+0.6
2,263,976	-		DZA65_RS10685	0.58	-1.2
2,263,976	-		DZA65_RS10685	0.58	+0.3
2,263,979	+		DZA65_RS10685	0.59	-0.7
2,263,980	-		DZA65_RS10685	0.59	+0.1
2,263,985	+		DZA65_RS10685	0.60	-0.1
2,263,985	+		DZA65_RS10685	0.60	-2.2
2,263,985	+		DZA65_RS10685	0.60	-0.5
2,263,986	-		DZA65_RS10685	0.60	-1.9
2,264,069	+		DZA65_RS10685	0.74	-0.9
2,264,069	+		DZA65_RS10685	0.74	-0.5
2,264,081	-		DZA65_RS10685	0.76	-1.4
2,264,113	+		DZA65_RS10685	0.81	-1.7
2,264,123	+		DZA65_RS10685	0.83	+0.6
2,264,123	+		DZA65_RS10685	0.83	-1.4
2,264,195	+				+0.1
2,264,208	-				+0.6
2,264,293	-				-1.0
2,264,356	-				+0.6
2,264,396	-		DZA65_RS10690	0.12	-0.8
2,264,396	-		DZA65_RS10690	0.12	+0.7
2,264,608	-				+0.3
2,264,608	-				+0.1
2,264,780	-				-0.7
2,264,783	+				-0.3
2,264,784	-				-0.1
2,264,802	+				+1.1
2,264,806	+				-1.2
2,264,807	-				-0.5
2,264,807	-				-0.0
2,264,826	+				+1.4
2,264,946	-		DZA65_RS22875	0.76	-0.4
2,264,968	+				+0.6
2,264,968	+				-1.2
2,264,977	+				-1.2
2,264,984	-				-0.3
2,265,037	-				-0.2
2,265,075	-				+1.7
2,265,100	-				-0.5
2,265,152	-				+0.9
2,265,154	-				-0.5
2,265,154	-				-0.7
2,265,154	-				-0.2
2,265,154	-				-0.4
2,265,171	+				-1.1
2,265,197	-				+1.1