Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10390

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,195,096	+		DZA65_RS10380	0.70	-0.1
2,195,096	+		DZA65_RS10380	0.70	-0.3
2,195,096	+		DZA65_RS10380	0.70	+0.4
2,195,241	+		DZA65_RS10380	0.79	+0.2
2,195,241	+		DZA65_RS10380	0.79	-0.2
2,195,241	+		DZA65_RS10380	0.79	-0.9
2,195,241	+		DZA65_RS10380	0.79	+0.1
2,195,241	+		DZA65_RS10380	0.79	-0.5
2,195,241	+		DZA65_RS10380	0.79	-0.1
2,195,241	+		DZA65_RS10380	0.79	+0.1
2,195,241	+		DZA65_RS10380	0.79	+0.3
2,195,242	-		DZA65_RS10380	0.79	-2.2
2,195,242	-		DZA65_RS10380	0.79	-1.5
2,195,242	-		DZA65_RS10380	0.79	-1.2
2,195,304	+		DZA65_RS10380	0.83	-3.1
2,195,304	+		DZA65_RS10380	0.83	+0.2
2,195,304	+		DZA65_RS10380	0.83	-0.4
2,195,304	+		DZA65_RS10380	0.83	+1.3
2,195,305	-		DZA65_RS10380	0.83	+0.6
2,195,305	-		DZA65_RS10380	0.83	-0.0
2,195,305	-		DZA65_RS10380	0.83	-0.3
2,195,330	+		DZA65_RS10380	0.85	+0.5
2,195,330	+		DZA65_RS10380	0.85	-0.0
2,195,330	+		DZA65_RS10380	0.85	-0.6
2,195,331	-		DZA65_RS10380	0.85	+0.6
2,195,331	-		DZA65_RS10380	0.85	+1.3
2,195,375	+		DZA65_RS10380	0.88	-2.1
2,195,376	-		DZA65_RS10380	0.88	-0.6
2,195,376	-		DZA65_RS10380	0.88	-0.5
2,195,565	+				-0.7
2,195,566	-				+0.3
2,195,596	+				-1.2
2,195,596	+				-0.3
2,195,597	-				-0.6
2,195,597	-				-0.3
2,195,597	-				-0.4
2,195,605	+				-0.1
2,195,606	-				-0.9
2,195,616	-				+0.4
2,195,739	+		DZA65_RS10385	0.24	-0.5
2,196,046	-		DZA65_RS10385	0.90	-1.5
2,196,091	+				-1.1
2,196,110	+				-0.4
2,196,110	+				+1.7
2,196,111	-				+0.4
2,196,111	-				+0.7
2,196,111	-				-0.1
2,196,111	-				-0.2
2,196,226	+		DZA65_RS10390	0.30	+0.3
2,196,226	+		DZA65_RS10390	0.30	+1.1
2,196,226	+		DZA65_RS10390	0.30	-0.2
2,196,226	+		DZA65_RS10390	0.30	+0.8
2,196,227	-		DZA65_RS10390	0.30	+0.3
2,196,227	-		DZA65_RS10390	0.30	+0.7
2,196,227	-		DZA65_RS10390	0.30	-0.8
2,196,227	-		DZA65_RS10390	0.30	+0.1
2,196,477	+		DZA65_RS10390	0.83	-0.9
2,196,478	-		DZA65_RS10390	0.83	+0.2
2,196,478	-		DZA65_RS10390	0.83	-1.5
2,196,509	+				-0.5
2,196,510	-				+0.1
2,196,711	+				-1.2
2,196,711	+		DZA65_RS22870	0.89	+1.1
2,196,711	+		DZA65_RS22870	0.89	-0.7
2,196,711	+		DZA65_RS22870	0.89	+0.3
2,196,711	+		DZA65_RS22870	0.89	-0.1
2,196,712	-		DZA65_RS22870	0.89	-1.1
2,196,712	-		DZA65_RS22870	0.89	-1.2
2,196,712	-		DZA65_RS22870	0.89	+0.1
2,196,712	-		DZA65_RS22870	0.89	-0.8
2,196,727	+				-0.5
2,196,739	-				-0.9
2,196,872	-				+0.2
2,196,964	+		DZA65_RS10395	0.16	+0.8
2,196,964	+		DZA65_RS10395	0.16	-1.3
2,196,965	-		DZA65_RS10395	0.16	+0.2
2,196,965	-		DZA65_RS10395	0.16	+0.6
2,197,060	-		DZA65_RS10395	0.31	-0.1
2,197,092	-		DZA65_RS10395	0.36	-1.3
2,197,126	+		DZA65_RS10395	0.41	-1.2
2,197,126	+		DZA65_RS10395	0.41	-0.0
2,197,126	+		DZA65_RS10395	0.41	-0.3
2,197,127	-		DZA65_RS10395	0.41	-0.5
2,197,132	+		DZA65_RS10395	0.42	+1.1
2,197,132	+		DZA65_RS10395	0.42	+0.9
2,197,133	-		DZA65_RS10395	0.42	+0.4
2,197,133	-		DZA65_RS10395	0.42	-1.1
2,197,143	+		DZA65_RS10395	0.43	+0.8
2,197,143	+		DZA65_RS10395	0.43	-0.9
2,197,159	+		DZA65_RS10395	0.46	+0.1
2,197,159	+		DZA65_RS10395	0.46	+2.1
2,197,160	-		DZA65_RS10395	0.46	+0.1
2,197,160	-		DZA65_RS10395	0.46	-0.1
2,197,160	-		DZA65_RS10395	0.46	-2.5
2,197,160	-		DZA65_RS10395	0.46	+0.0
2,197,171	+		DZA65_RS10395	0.48	+0.1
2,197,171	+		DZA65_RS10395	0.48	+0.3
2,197,172	-		DZA65_RS10395	0.48	+0.1
2,197,172	-		DZA65_RS10395	0.48	-0.0
2,197,225	+		DZA65_RS10395	0.56	+0.3
2,197,225	+		DZA65_RS10395	0.56	-1.3
2,197,225	+		DZA65_RS10395	0.56	-0.3
2,197,225	+		DZA65_RS10395	0.56	+0.3
2,197,225	+		DZA65_RS10395	0.56	-0.9
2,197,225	+		DZA65_RS10395	0.56	-1.2
2,197,225	+		DZA65_RS10395	0.56	-1.0
2,197,226	-		DZA65_RS10395	0.56	-1.7
2,197,226	-		DZA65_RS10395	0.56	-0.1
2,197,227	+		DZA65_RS10395	0.56	+0.7
2,197,227	+		DZA65_RS10395	0.56	-0.1
2,197,227	+		DZA65_RS10395	0.56	-0.5
2,197,228	-		DZA65_RS10395	0.56	+0.2
2,197,228	-		DZA65_RS10395	0.56	-0.6
2,197,228	-		DZA65_RS10395	0.56	-1.0
2,197,288	+		DZA65_RS10395	0.65	-1.1
2,197,289	-		DZA65_RS10395	0.65	+0.7
2,197,289	-		DZA65_RS10395	0.65	-0.2
2,197,399	+		DZA65_RS10395	0.82	-0.1
2,197,400	-		DZA65_RS10395	0.82	+0.7
2,197,417	+		DZA65_RS10395	0.85	-0.4
2,197,417	+		DZA65_RS10395	0.85	+0.3
2,197,417	+		DZA65_RS10395	0.85	-0.3
2,197,418	-		DZA65_RS10395	0.85	-0.7
2,197,418	-		DZA65_RS10395	0.85	-0.5
2,197,418	-		DZA65_RS10395	0.85	+0.1
2,197,418	-		DZA65_RS10395	0.85	-0.5
2,197,450	-		DZA65_RS10395	0.90	-0.3
2,197,475	+				-0.9
2,197,475	+				+0.4
2,197,551	+				-0.0
2,197,551	+				-0.9
2,197,551	+				+0.5
2,197,552	-				+0.5