Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09570

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,010,762	+		DZA65_RS09565	0.13	-1.0
2,010,762	+		DZA65_RS09565	0.13	-1.1
2,010,762	+		DZA65_RS09565	0.13	-1.4
2,010,762	+		DZA65_RS09565	0.13	-0.5
2,010,763	-		DZA65_RS09565	0.13	-0.6
2,010,763	-		DZA65_RS09565	0.13	-0.6
2,010,763	-		DZA65_RS09565	0.13	-0.5
2,010,766	+		DZA65_RS09565	0.14	+0.8
2,010,766	+		DZA65_RS09565	0.14	-1.9
2,010,766	+		DZA65_RS09565	0.14	-1.2
2,010,767	-		DZA65_RS09565	0.14	-0.6
2,010,786	+		DZA65_RS09565	0.15	+0.1
2,010,786	+		DZA65_RS09565	0.15	-0.2
2,010,786	+		DZA65_RS09565	0.15	-1.3
2,010,787	-		DZA65_RS09565	0.16	-0.2
2,010,808	-		DZA65_RS09565	0.17	+0.2
2,010,889	+		DZA65_RS09565	0.24	-0.9
2,010,889	+		DZA65_RS09565	0.24	+0.8
2,010,889	+		DZA65_RS09565	0.24	-0.2
2,010,889	+		DZA65_RS09565	0.24	+0.1
2,010,890	-		DZA65_RS09565	0.25	-0.7
2,010,896	+		DZA65_RS09565	0.25	+0.0
2,011,023	-		DZA65_RS09565	0.36	-1.0
2,011,023	-		DZA65_RS09565	0.36	+1.7
2,011,063	-		DZA65_RS09565	0.40	+1.7
2,011,224	+		DZA65_RS09565	0.54	-0.7
2,011,340	+		DZA65_RS09565	0.64	+1.1
2,011,340	+		DZA65_RS09565	0.64	+0.8
2,011,340	+		DZA65_RS09565	0.64	+0.1
2,011,357	+		DZA65_RS09565	0.66	+0.5
2,011,358	-		DZA65_RS09565	0.66	+0.1
2,011,485	+		DZA65_RS09565	0.77	+0.1
2,011,785	+				-0.6
2,011,786	-				+1.7
2,011,792	+				-0.5
2,011,793	-				-0.7
2,011,793	-				+0.1
2,011,793	-				-0.6
2,011,795	+				-1.2
2,011,796	-				+1.1
2,011,830	-				-0.7
2,011,830	-				-0.1
2,012,237	+		DZA65_RS09570	0.52	-1.7
2,012,238	-		DZA65_RS09570	0.52	-0.0
2,012,238	-		DZA65_RS09570	0.52	-0.5
2,012,238	-		DZA65_RS09570	0.52	-0.2
2,012,492	+		DZA65_RS09570	0.79	+0.4
2,012,497	+		DZA65_RS09570	0.80	+0.1
2,012,532	+		DZA65_RS09570	0.84	+0.7
2,012,533	-		DZA65_RS09570	0.84	-0.1
2,012,533	-		DZA65_RS09570	0.84	-1.3
2,012,533	-		DZA65_RS09570	0.84	+1.1
2,012,539	+		DZA65_RS09570	0.84	-1.3
2,012,540	-		DZA65_RS09570	0.85	-1.2
2,012,540	-		DZA65_RS09570	0.85	-0.0
2,012,617	+				+1.1
2,012,618	-				-0.9
2,012,618	-				+0.7
2,012,618	-				+1.4
2,012,618	-				-0.5
2,012,668	+				+0.3
2,012,668	+				+2.1
2,012,668	+				-0.5
2,012,669	-				-1.1
2,012,669	-				-0.1
2,012,679	-				-0.3
2,012,696	-				-0.6
2,012,696	-				-0.5
2,012,717	+				-1.6
2,012,717	+				-1.0
2,012,717	+				-1.0
2,012,717	+				-0.0
2,012,717	+				+0.5
2,012,718	-				+0.3
2,012,718	-				-1.0
2,012,718	-				-0.5
2,012,718	-				-1.2
2,012,718	-				+0.7
2,012,718	-				-0.5
2,012,724	+				+0.1
2,012,725	-				-0.2
2,012,796	+				-0.2
2,012,796	+				+0.8
2,012,796	+				+0.7
2,012,796	+				-0.0
2,012,796	+				+0.3
2,012,797	-				+0.5
2,012,963	-		DZA65_RS09575	0.16	+0.3
2,013,009	+		DZA65_RS09575	0.18	-0.1
2,013,010	-		DZA65_RS09575	0.18	-0.6
2,013,010	-		DZA65_RS09575	0.18	-0.2
2,013,055	-		DZA65_RS09575	0.21	+1.9
2,013,235	+		DZA65_RS09575	0.32	-0.9
2,013,235	+		DZA65_RS09575	0.32	-1.7
2,013,235	+		DZA65_RS09575	0.32	-0.9
2,013,235	+		DZA65_RS09575	0.32	-0.6
2,013,236	-		DZA65_RS09575	0.32	+0.1
2,013,236	-		DZA65_RS09575	0.32	-1.6
2,013,236	-		DZA65_RS09575	0.32	-2.3
2,013,236	-		DZA65_RS09575	0.32	-0.7
2,013,406	+		DZA65_RS09575	0.42	-0.5
2,013,406	+		DZA65_RS09575	0.42	-1.7
2,013,406	+		DZA65_RS09575	0.42	+0.2
2,013,406	+		DZA65_RS09575	0.42	+0.7
2,013,406	+		DZA65_RS09575	0.42	+0.5
2,013,407	-		DZA65_RS09575	0.42	-0.1
2,013,407	-		DZA65_RS09575	0.42	+0.6
2,013,407	-		DZA65_RS09575	0.42	-0.6
2,013,407	-		DZA65_RS09575	0.42	+0.8
2,013,407	-		DZA65_RS09575	0.42	+1.7
2,013,407	-		DZA65_RS09575	0.42	-0.4
2,013,407	-		DZA65_RS09575	0.42	+0.9
2,013,562	+		DZA65_RS09575	0.51	+1.6
2,013,564	+		DZA65_RS09575	0.51	-0.5
2,013,564	+		DZA65_RS09575	0.51	+0.7
2,013,565	-		DZA65_RS09575	0.51	-1.6
2,013,682	+		DZA65_RS09575	0.58	-0.3