Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08665

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,833,767	-		DZA65_RS08660	0.54	-1.3
1,833,808	+		DZA65_RS08660	0.57	-0.1
1,833,808	+		DZA65_RS08660	0.57	+0.2
1,833,809	-		DZA65_RS08660	0.57	-0.6
1,833,809	-		DZA65_RS08660	0.57	+0.2
1,833,865	+		DZA65_RS08660	0.61	+0.7
1,833,866	-		DZA65_RS08660	0.61	-0.1
1,833,903	+		DZA65_RS08660	0.63	-0.2
1,834,005	+		DZA65_RS08660	0.70	+1.2
1,834,005	+		DZA65_RS08660	0.70	-0.5
1,834,005	+		DZA65_RS08660	0.70	-0.8
1,834,005	+		DZA65_RS08660	0.70	+0.1
1,834,005	+		DZA65_RS08660	0.70	-0.8
1,834,005	+		DZA65_RS08660	0.70	-0.3
1,834,005	+		DZA65_RS08660	0.70	+0.3
1,834,005	+		DZA65_RS08660	0.70	+0.6
1,834,005	+		DZA65_RS08660	0.70	+1.0
1,834,006	-		DZA65_RS08660	0.71	-0.3
1,834,006	-		DZA65_RS08660	0.71	+0.0
1,834,006	-		DZA65_RS08660	0.71	-0.3
1,834,006	-		DZA65_RS08660	0.71	+0.6
1,834,006	-		DZA65_RS08660	0.71	-0.7
1,834,006	-		DZA65_RS08660	0.71	-1.5
1,834,084	+		DZA65_RS08660	0.76	-0.2
1,834,084	+		DZA65_RS08660	0.76	-0.6
1,834,085	-		DZA65_RS08660	0.76	+0.9
1,834,085	-		DZA65_RS08660	0.76	-0.3
1,834,085	-		DZA65_RS08660	0.76	-0.8
1,834,085	-		DZA65_RS08660	0.76	+0.4
1,834,085	-		DZA65_RS08660	0.76	-0.6
1,834,085	-		DZA65_RS08660	0.76	-0.9
1,834,085	-		DZA65_RS08660	0.76	-1.3
1,834,085	-		DZA65_RS08660	0.76	-0.0
1,834,127	+		DZA65_RS08660	0.79	-0.4
1,834,138	+		DZA65_RS08660	0.80	+0.2
1,834,138	+		DZA65_RS08660	0.80	-0.2
1,834,138	+		DZA65_RS08660	0.80	-0.2
1,834,138	+		DZA65_RS08660	0.80	+0.2
1,834,138	+		DZA65_RS08660	0.80	+1.0
1,834,138	+		DZA65_RS08660	0.80	-0.2
1,834,138	+		DZA65_RS08660	0.80	+0.2
1,834,138	+		DZA65_RS08660	0.80	+0.8
1,834,138	+		DZA65_RS08660	0.80	-0.1
1,834,139	-		DZA65_RS08660	0.80	-0.2
1,834,139	-		DZA65_RS08660	0.80	-1.0
1,834,141	-		DZA65_RS08660	0.80	+0.4
1,834,141	-		DZA65_RS08660	0.80	-0.1
1,834,175	+		DZA65_RS08660	0.82	-0.3
1,834,176	-		DZA65_RS08660	0.82	+1.2
1,834,215	+		DZA65_RS08660	0.85	+0.9
1,834,215	+		DZA65_RS08660	0.85	-0.3
1,834,215	+		DZA65_RS08660	0.85	+0.6
1,834,216	-		DZA65_RS08660	0.85	+0.3
1,834,363	+				-0.1
1,834,364	-				+0.3
1,834,364	-				-0.3
1,834,364	-				+0.2
1,834,364	-				+0.2
1,834,364	-				-0.7
1,834,373	+				-1.4
1,834,374	-				-0.8
1,834,422	+				-0.7
1,834,422	+				-0.6
1,834,423	-				-0.8
1,834,423	-				-2.1
1,834,423	-				+0.5
1,834,423	-				-1.2
1,834,423	-				+1.0
1,834,546	-		DZA65_RS08665	0.15	-0.9
1,834,755	+		DZA65_RS08665	0.44	+0.3
1,834,755	+				+0.7
1,834,755	+		DZA65_RS08665	0.44	-1.4
1,834,755	+		DZA65_RS08665	0.44	-0.6
1,834,756	-		DZA65_RS08665	0.44	+0.6
1,834,756	-		DZA65_RS08665	0.44	-0.4
1,834,756	-		DZA65_RS08665	0.44	-0.4
1,834,756	-		DZA65_RS08665	0.44	-0.2
1,834,756	-		DZA65_RS08665	0.44	-1.1
1,834,896	+		DZA65_RS08665	0.64	-1.6
1,834,897	-		DZA65_RS08665	0.64	+0.4
1,835,002	+		DZA65_RS08665	0.79	-0.7
1,835,002	+		DZA65_RS08665	0.79	-0.2
1,835,004	+		DZA65_RS08665	0.79	-0.4
1,835,004	+		DZA65_RS08665	0.79	-0.7
1,835,004	+		DZA65_RS08665	0.79	+0.2
1,835,004	+		DZA65_RS08665	0.79	-1.3
1,835,004	+		DZA65_RS08665	0.79	-1.2
1,835,004	+		DZA65_RS08665	0.79	-0.1
1,835,005	-		DZA65_RS08665	0.79	-0.3
1,835,146	+				-0.4
1,835,146	+				-1.4
1,835,146	+				-1.0
1,835,163	+				+0.1
1,835,163	+				+0.4
1,835,163	+				+0.2
1,835,164	-				+0.5
1,835,164	-				-1.8
1,835,164	-				+0.3
1,835,188	+				-0.1
1,835,188	+				-1.2
1,835,188	+				+0.9
1,835,188	+				+1.4
1,835,188	+				-0.4
1,835,188	+				-0.6
1,835,188	+				+0.0
1,835,188	+				-0.8
1,835,188	+				+0.6
1,835,188	+				-2.0
1,835,189	-				-0.5
1,835,189	-				+0.0
1,835,189	-				-0.1
1,835,189	-				-0.0
1,835,279	+				-0.3
1,835,279	+				-0.8
1,835,279	+				-0.4
1,835,279	+				-1.3
1,835,279	+				-0.3
1,835,280	-				+1.3
1,835,303	-				+0.4
1,835,330	-				-0.6
1,835,356	+				-0.3
1,835,456	+		DZA65_RS08670	0.11	+0.5
1,835,457	-		DZA65_RS08670	0.11	+1.2
1,835,457	-		DZA65_RS08670	0.11	-0.3
1,835,464	+		DZA65_RS08670	0.12	+0.4
1,835,465	-		DZA65_RS08670	0.12	-0.4
1,835,465	-		DZA65_RS08670	0.12	-0.8
1,835,468	+		DZA65_RS08670	0.12	-0.5
1,835,469	-		DZA65_RS08670	0.12	-1.2
1,835,529	-		DZA65_RS08670	0.20	+0.7
1,835,592	-		DZA65_RS08670	0.28	-1.8
1,835,663	+		DZA65_RS08670	0.36	-0.7
1,835,664	-		DZA65_RS08670	0.37	+0.4
1,835,664	-		DZA65_RS08670	0.37	+0.3
1,835,664	-		DZA65_RS08670	0.37	-2.2
1,835,678	+				-0.4
1,835,678	+		DZA65_RS08670	0.38	-0.5
1,835,678	+		DZA65_RS08670	0.38	-0.8
1,835,679	-		DZA65_RS08670	0.38	-1.7
1,835,747	+		DZA65_RS08670	0.47	-1.4
1,835,748	-		DZA65_RS08670	0.47	-1.2
1,835,774	+		DZA65_RS08670	0.50	+0.6
1,835,969	-		DZA65_RS08670	0.75	+0.2
1,835,969	-		DZA65_RS08670	0.75	-1.2
1,835,969	-		DZA65_RS08670	0.75	-2.4
1,836,121	+				-0.2
1,836,121	+				+1.2
1,836,122	-				-1.4
1,836,122	-				+0.3
1,836,122	-				-0.6