Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07905

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,648,866	+		DZA65_RS07900	0.38	-1.1
1,648,866	+		DZA65_RS07900	0.38	-1.3
1,648,866	+		DZA65_RS07900	0.38	+1.9
1,648,866	+		DZA65_RS07900	0.38	-0.5
1,648,866	+		DZA65_RS07900	0.38	-0.2
1,648,866	+		DZA65_RS07900	0.38	+0.6
1,648,866	+		DZA65_RS07900	0.38	+0.0
1,648,866	+		DZA65_RS07900	0.38	-1.0
1,648,866	+		DZA65_RS07900	0.38	-0.5
1,648,867	-		DZA65_RS07900	0.38	+0.7
1,648,867	-		DZA65_RS07900	0.38	-0.0
1,648,867	-		DZA65_RS07900	0.38	+0.2
1,648,867	-		DZA65_RS07900	0.38	+0.8
1,648,867	-		DZA65_RS07900	0.38	-0.0
1,648,867	-		DZA65_RS07900	0.38	-1.1
1,648,867	-		DZA65_RS07900	0.38	-2.1
1,648,867	-		DZA65_RS07900	0.38	+1.2
1,648,867	-		DZA65_RS07900	0.38	+0.7
1,648,867	-		DZA65_RS07900	0.38	-0.1
1,648,867	-		DZA65_RS07900	0.38	+0.0
1,648,867	-		DZA65_RS07900	0.38	+1.2
1,648,870	+		DZA65_RS07900	0.38	-0.0
1,648,870	+		DZA65_RS07900	0.38	-1.6
1,648,870	+		DZA65_RS07900	0.38	+0.0
1,648,870	+		DZA65_RS07900	0.38	-0.5
1,648,870	+		DZA65_RS07900	0.38	+1.0
1,648,871	-		DZA65_RS07900	0.38	+1.8
1,648,871	-		DZA65_RS07900	0.38	+0.5
1,648,871	-		DZA65_RS07900	0.38	-0.8
1,648,871	-		DZA65_RS07900	0.38	+0.3
1,648,871	-		DZA65_RS07900	0.38	-0.6
1,648,871	-		DZA65_RS07900	0.38	+0.5
1,648,986	+		DZA65_RS07900	0.50	+0.7
1,649,007	-		DZA65_RS07900	0.52	-0.2
1,649,007	-		DZA65_RS07900	0.52	+1.2
1,649,147	+		DZA65_RS07900	0.66	-0.8
1,649,147	+		DZA65_RS07900	0.66	-0.3
1,649,147	+		DZA65_RS07900	0.66	+0.9
1,649,147	+		DZA65_RS07900	0.66	+1.2
1,649,147	+		DZA65_RS07900	0.66	+0.8
1,649,148	-		DZA65_RS07900	0.66	-0.2
1,649,464	+				+0.3
1,649,464	+				+0.1
1,649,557	+				-0.0
1,649,558	-				+0.1
1,649,615	+				+0.4
1,649,657	+				-0.9
1,649,700	-				-2.0
1,649,709	+				-1.3
1,649,718	-				-0.1
1,649,718	-				+0.7
1,649,729	+				+0.5
1,649,796	+				-2.4
1,649,804	+				-0.8
1,649,805	-				-0.2
1,649,826	-				+0.9
1,649,828	-				-0.7
1,649,828	-				-0.0
1,649,830	+				-0.3
1,649,883	+				-0.6
1,649,883	+				-1.0
1,649,883	+				-0.6
1,649,887	+				-0.1
1,649,887	+				-0.7
1,649,887	+				-1.1
1,649,888	-				+0.8
1,649,896	-				-1.1
1,649,896	-				+0.4
1,649,977	+		DZA65_RS07905	0.11	-1.1
1,649,977	+		DZA65_RS07905	0.11	-0.6
1,649,978	-		DZA65_RS07905	0.11	+0.8
1,650,018	+		DZA65_RS07905	0.15	+0.2
1,650,285	+		DZA65_RS07905	0.41	-2.1
1,650,285	+		DZA65_RS07905	0.41	+0.2
1,650,285	+		DZA65_RS07905	0.41	+0.1
1,650,286	-		DZA65_RS07905	0.41	-1.0
1,650,554	+		DZA65_RS07905	0.68	-0.8
1,650,555	-		DZA65_RS07905	0.68	-1.8
1,650,555	-		DZA65_RS07905	0.68	-0.7
1,650,555	-		DZA65_RS07905	0.68	-0.2
1,650,649	+		DZA65_RS07905	0.77	-1.6
1,650,649	+		DZA65_RS07905	0.77	-0.3
1,650,649	+		DZA65_RS07905	0.77	-0.5
1,650,649	+		DZA65_RS07905	0.77	-0.1
1,650,649	+		DZA65_RS07905	0.77	-0.3
1,650,649	+		DZA65_RS07905	0.77	-0.2
1,650,650	-		DZA65_RS07905	0.77	-0.7
1,650,650	-		DZA65_RS07905	0.77	-0.3
1,650,825	-				-0.4
1,650,952	+				-0.6
1,650,953	-				+0.0
1,650,953	-				-1.1
1,651,138	-				-0.8
1,651,138	-				-0.1
1,651,158	+				+1.7
1,651,158	+				+0.5
1,651,159	-				+0.4
1,651,159	-				-0.2
1,651,160	+				-0.7
1,651,161	-		DZA65_RS07910	0.10	+1.6
1,651,161	-		DZA65_RS07910	0.10	-1.0
1,651,262	+		DZA65_RS07910	0.20	+1.0
1,651,263	-		DZA65_RS07910	0.20	-1.3
1,651,263	-		DZA65_RS07910	0.20	+0.5
1,651,263	-		DZA65_RS07910	0.20	-1.6
1,651,265	+		DZA65_RS07910	0.20	-1.8
1,651,266	-		DZA65_RS07910	0.20	-0.8
1,651,266	-		DZA65_RS07910	0.20	-0.9
1,651,266	-		DZA65_RS07910	0.20	+0.8
1,651,266	-		DZA65_RS07910	0.20	+0.5
1,651,342	+		DZA65_RS07910	0.28	-0.5
1,651,342	+		DZA65_RS07910	0.28	+2.2
1,651,342	+		DZA65_RS07910	0.28	-0.8
1,651,343	-		DZA65_RS07910	0.28	+0.2
1,651,343	-		DZA65_RS07910	0.28	+0.3
1,651,369	-		DZA65_RS07910	0.31	-0.2
1,651,380	+		DZA65_RS07910	0.32	-0.1
1,651,515	+		DZA65_RS07910	0.45	-0.8
1,651,515	+		DZA65_RS07910	0.45	+0.5
1,651,515	+		DZA65_RS07910	0.45	+0.7
1,651,515	+		DZA65_RS07910	0.45	-0.1
1,651,515	+		DZA65_RS07910	0.45	+1.0
1,651,515	+		DZA65_RS07910	0.45	+0.1
1,651,515	+		DZA65_RS07910	0.45	-0.2
1,651,516	-		DZA65_RS07910	0.45	+0.3
1,651,516	-		DZA65_RS07910	0.45	+1.6
1,651,516	-		DZA65_RS07910	0.45	-1.0
1,651,516	-		DZA65_RS07910	0.45	-1.0
1,651,516	-		DZA65_RS07910	0.45	+0.4
1,651,516	-		DZA65_RS07910	0.45	+0.0
1,651,587	+		DZA65_RS07910	0.52	+0.9
1,651,588	+		DZA65_RS07910	0.52	+0.6
1,651,588	-		DZA65_RS07910	0.52	-1.0
1,651,588	-		DZA65_RS07910	0.52	-0.5
1,651,588	-		DZA65_RS07910	0.52	-0.6
1,651,588	-		DZA65_RS07910	0.52	-0.5
1,651,622	+		DZA65_RS07910	0.56	+0.6
1,651,627	+		DZA65_RS07910	0.56	-1.8
1,651,628	-		DZA65_RS07910	0.56	-0.6
1,651,628	-		DZA65_RS07910	0.56	-0.2
1,651,718	-		DZA65_RS07910	0.65	-0.8
1,651,834	-		DZA65_RS07910	0.76	+0.4
1,651,834	-		DZA65_RS07910	0.76	-0.2
1,651,834	-		DZA65_RS07910	0.76	-1.4
1,651,834	-		DZA65_RS07910	0.76	-0.5
1,651,834	-		DZA65_RS07910	0.76	-1.1
1,651,848	+		DZA65_RS07910	0.78	-1.6