Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05590

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,150,299	+				+0.2
1,150,353	+				+0.6
1,150,353	+				+0.6
1,150,354	-				-0.3
1,150,354	-				+0.5
1,150,354	-				-0.4
1,150,397	+				-0.7
1,150,397	+				-1.7
1,150,398	-				+0.6
1,150,398	-				+0.0
1,150,398	-				+0.0
1,150,415	+				-0.2
1,150,415	+				+0.0
1,150,415	+				-0.2
1,150,416	-				-0.2
1,150,416	-				-0.1
1,150,416	-				-1.1
1,150,416	-				+0.1
1,150,418	+				-0.7
1,150,418	+				+0.2
1,150,419	-				-1.0
1,150,419	-				-1.5
1,150,723	-		DZA65_RS05590	0.62	-1.2
1,150,723	-		DZA65_RS05590	0.62	-0.7
1,150,723	-		DZA65_RS05590	0.62	-1.1
1,150,766	-		DZA65_RS05590	0.71	-0.2
1,150,837	+		DZA65_RS05590	0.88	-0.1
1,150,837	+		DZA65_RS05590	0.88	-0.1
1,150,837	+		DZA65_RS05590	0.88	+0.2
1,150,837	+		DZA65_RS05590	0.88	+0.8
1,150,838	-		DZA65_RS05590	0.88	-2.5
1,150,838	-		DZA65_RS05590	0.88	-1.0
1,150,838	-		DZA65_RS05590	0.88	-1.7
1,150,880	+				+0.0
1,150,880	+				+0.9
1,150,880	+				-1.8
1,150,880	+				-0.2
1,150,881	-				-0.2
1,150,934	+				-0.2
1,150,934	+				-0.4
1,150,934	+				+0.1
1,150,955	+				-1.0
1,150,960	+				+0.0
1,150,961	-				-0.8
1,150,967	+				+0.2
1,150,967	+				-0.0
1,150,968	-				-1.0
1,150,968	-				-1.0
1,150,968	-				-0.2
1,150,969	+				-0.5
1,150,969	+				-2.2
1,150,969	+				+0.8
1,150,969	+				-0.8
1,150,969	+				+0.5
1,150,969	+				-0.3
1,150,969	+				+0.0
1,150,969	+				+0.1
1,150,970	-				+0.8
1,150,970	-				+0.8
1,150,973	+				-0.2
1,150,973	+				+0.3
1,150,973	+				+0.5
1,150,973	+				-0.3
1,150,974	-				+0.7
1,150,974	-				+0.8
1,150,974	-				-0.5
1,150,974	-				-1.7
1,150,994	+				-0.7
1,150,995	-				-0.4
1,151,241	+				+0.6
1,151,241	+				-1.5
1,151,241	+				-0.2
1,151,278	+				+1.8
1,151,279	-				+0.3
1,151,279	-				-1.7
1,151,347	+				-1.8
1,151,347	+				-0.3
1,151,347	+				+0.0
1,151,348	-				-0.2
1,151,348	-				-0.6
1,151,348	-				+0.6
1,151,392	+		DZA65_RS05595	0.12	+0.1
1,151,392	+		DZA65_RS05595	0.12	+0.1
1,151,392	+		DZA65_RS05595	0.12	-0.2
1,151,392	+		DZA65_RS05595	0.12	-1.2
1,151,423	+		DZA65_RS05595	0.16	+0.7
1,151,423	+		DZA65_RS05595	0.16	+0.7
1,151,424	-		DZA65_RS05595	0.16	-0.7
1,151,424	-		DZA65_RS05595	0.16	+0.1
1,151,429	+		DZA65_RS05595	0.17	+0.3
1,151,429	+		DZA65_RS05595	0.17	+0.3
1,151,429	+		DZA65_RS05595	0.17	+0.2
1,151,429	+		DZA65_RS05595	0.17	-0.2
1,151,430	-		DZA65_RS05595	0.17	+0.1
1,151,430	-		DZA65_RS05595	0.17	+0.0
1,151,495	+		DZA65_RS05595	0.26	+1.9
1,151,496	-		DZA65_RS05595	0.26	+1.3
1,151,505	-		DZA65_RS05595	0.27	+0.1
1,151,505	-		DZA65_RS05595	0.27	+0.6
1,151,575	+		DZA65_RS05595	0.37	+0.3
1,151,575	+		DZA65_RS05595	0.37	+0.8
1,151,575	+		DZA65_RS05595	0.37	-0.3
1,151,575	+		DZA65_RS05595	0.37	-2.0
1,151,575	+		DZA65_RS05595	0.37	+0.3
1,151,575	+		DZA65_RS05595	0.37	+0.3
1,151,575	+		DZA65_RS05595	0.37	-0.9
1,151,576	-		DZA65_RS05595	0.37	+0.2
1,151,576	-		DZA65_RS05595	0.37	-0.4
1,151,576	-		DZA65_RS05595	0.37	-0.3
1,151,576	-		DZA65_RS05595	0.37	-0.9
1,151,576	-		DZA65_RS05595	0.37	-0.2
1,151,580	+		DZA65_RS05595	0.37	+0.1
1,151,580	+		DZA65_RS05595	0.37	-1.2
1,151,580	+		DZA65_RS05595	0.37	-0.4
1,151,580	+		DZA65_RS05595	0.37	+0.1
1,151,580	+		DZA65_RS05595	0.37	-0.2
1,151,580	+		DZA65_RS05595	0.37	-0.1
1,151,580	+		DZA65_RS05595	0.37	-0.7
1,151,581	-		DZA65_RS05595	0.38	+0.3
1,151,581	-		DZA65_RS05595	0.38	-1.8
1,151,581	-		DZA65_RS05595	0.38	-1.8
1,151,635	+		DZA65_RS05595	0.45	-1.2
1,151,636	-		DZA65_RS05595	0.45	+0.0
1,151,636	-		DZA65_RS05595	0.45	+0.1
1,151,701	+		DZA65_RS05595	0.54	-1.3
1,151,702	-		DZA65_RS05595	0.54	-0.8
1,151,702	-		DZA65_RS05595	0.54	-1.9
1,151,713	+		DZA65_RS05595	0.55	-1.1
1,151,722	+		DZA65_RS05595	0.57	+0.5
1,151,723	-		DZA65_RS05595	0.57	-0.5
1,151,724	+		DZA65_RS05595	0.57	+0.5
1,151,724	+		DZA65_RS05595	0.57	-1.0
1,151,724	+		DZA65_RS05595	0.57	-1.5
1,151,724	+				+0.6
1,151,724	+		DZA65_RS05595	0.57	-1.0
1,151,724	+		DZA65_RS05595	0.57	+0.5
1,151,725	-		DZA65_RS05595	0.57	+0.2
1,151,725	-		DZA65_RS05595	0.57	-1.0
1,151,725	-		DZA65_RS05595	0.57	-0.2
1,151,725	-		DZA65_RS05595	0.57	+1.3
1,151,725	-		DZA65_RS05595	0.57	+0.3
1,151,725	-		DZA65_RS05595	0.57	+0.8
1,151,786	-		DZA65_RS05595	0.65	+1.2