Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS05110

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,054,403	+				-0.0
1,054,403	+				-0.3
1,054,404	-				+0.1
1,054,404	-				+0.0
1,054,404	-				+0.2
1,054,409	+				-0.6
1,054,409	+				-0.3
1,054,409	+				+0.5
1,054,409	+				-0.6
1,054,409	+				+0.8
1,054,409	+				-0.8
1,054,409	+				-0.2
1,054,410	-				-1.0
1,054,410	-				+0.2
1,054,410	-				-0.8
1,054,410	-				+0.2
1,054,410	-				-0.3
1,054,410	-				+0.4
1,054,410	-				-0.9
1,054,410	-				+0.9
1,054,411	+				-0.2
1,054,411	+				+0.9
1,054,411	+				-0.0
1,054,412	-				-1.1
1,054,412	-				+0.1
1,054,412	-				+0.2
1,054,412	-				-0.8
1,054,412	-				-2.5
1,054,412	-				-1.5
1,054,419	+				-0.1
1,054,424	+				-0.8
1,054,424	+				+0.1
1,054,424	+				+1.1
1,054,424	+				+0.2
1,054,425	-				-0.6
1,054,450	-				-0.8
1,054,480	+				+0.4
1,054,480	+				-0.4
1,054,480	+				-1.0
1,054,480	+				-0.8
1,054,494	+				+1.4
1,054,494	+				+0.6
1,054,495	-				+0.2
1,054,496	+				-0.5
1,054,579	+				-0.6
1,054,579	+				+0.6
1,054,580	-				+0.2
1,054,580	-				-0.2
1,054,582	+				-0.6
1,054,583	-				-0.1
1,054,583	-				-0.6
1,054,583	-				-0.3
1,054,669	+				-0.8
1,054,669	+				-0.5
1,054,669	+				-1.2
1,054,669	+				+0.5
1,054,670	-				-0.3
1,054,670	-				-0.1
1,054,670	-				+0.2
1,054,702	+				-0.2
1,054,703	-				+0.4
1,054,703	-				-0.2
1,054,763	-				-0.8
1,054,798	+				-1.4
1,054,798	+				+0.0
1,054,798	+				+0.8
1,054,798	+				+0.8
1,054,798	+				-0.9
1,054,963	+				+1.0
1,054,963	+				-0.3
1,054,963	+				+0.6
1,054,964	-				-0.2
1,054,964	-				+0.3
1,054,964	-				-1.0
1,054,964	-				-1.0
1,054,964	-				+1.1
1,054,995	+				-0.2
1,054,995	+				+0.4
1,054,996	-				+0.4
1,054,996	-				-0.1
1,055,037	+				+1.4
1,055,037	+				-2.1
1,055,037	+				+0.1
1,055,037	+				-2.6
1,055,038	-				-0.2
1,055,038	-				-0.2
1,055,038	-				+1.4
1,055,038	-				-0.2
1,055,038	-				+0.6
1,055,038	-				+1.4
1,055,038	-				-0.9
1,055,038	-				-0.7
1,055,041	+				+0.0
1,055,041	+				-1.4
1,055,041	+				+0.8
1,055,041	+				-1.2
1,055,041	+				-1.4
1,055,041	+				+0.3
1,055,041	+				-0.6
1,055,042	-				-1.2
1,055,042	-				+0.5
1,055,042	-				-0.2
1,055,072	+				+0.4
1,055,072	+				-0.9
1,055,072	+				-0.5
1,055,073	-				+0.4
1,055,073	-				+0.5
1,055,073	-				+0.1
1,055,073	-				+1.8
1,055,099	+				+0.4
1,055,100	-				+1.7
1,055,100	-				+1.6
1,055,117	+				-1.5
1,055,118	-				-0.7
1,055,167	+				-0.3
1,055,216	+				+1.7
1,055,216	+				-0.1
1,055,217	-				+0.9
1,055,217	-				-0.5
1,055,217	-				-1.2
1,055,217	-				-1.0
1,055,239	+				-0.4
1,055,239	+				+0.1
1,055,239	+				+0.2
1,055,239	+				-0.2
1,055,239	+				-1.2
1,055,239	+				-0.8
1,055,239	+				-0.4
1,055,239	+				+0.0
1,055,239	+				-2.0
1,055,240	-				-1.0
1,055,240	-				+1.4
1,055,240	-				-1.8
1,055,240	-				-0.9
1,055,267	+				-0.2
1,055,267	+				-0.5
1,055,300	-				+1.4
1,055,327	+				+1.0
1,055,327	+				+0.2
1,055,328	-				-1.0
1,055,331	+				-2.0
1,055,331	+				-0.9
1,055,331	+				+0.1
1,055,331	+				-0.8
1,055,331	+				-0.0
1,055,331	+				-0.3
1,055,331	+				-0.1
1,055,332	-				-0.2
1,055,332	-				+1.6
1,055,332	-				-0.6
1,055,357	+				-0.8
1,055,357	+				-0.5
1,055,357	+				-1.3
1,055,357	+				-0.0
1,055,357	+				+0.2
1,055,357	+				+0.3
1,055,358	-				+1.1
1,055,358	-				+1.8
1,055,362	-				+0.2
1,055,362	-				-0.5
1,055,362	-				+0.9
1,055,449	+				+0.5
1,055,449	+				-0.2
1,055,450	-				-1.5
1,055,450	-				-0.8
1,055,450	-				+0.0
1,055,512	+		DZA65_RS05110	0.13	-0.8
1,055,513	-		DZA65_RS05110	0.13	+0.8
1,055,513	-		DZA65_RS05110	0.13	-1.1
1,055,513	-		DZA65_RS05110	0.13	-2.4
1,055,514	+		DZA65_RS05110	0.14	-0.1
1,055,514	+		DZA65_RS05110	0.14	+0.3
1,055,514	+		DZA65_RS05110	0.14	-1.2
1,055,515	-		DZA65_RS05110	0.14	+0.7
1,055,515	-		DZA65_RS05110	0.14	-1.1
1,055,515	-		DZA65_RS05110	0.14	-0.5
1,055,561	+		DZA65_RS05110	0.19	-1.0
1,055,561	+		DZA65_RS05110	0.19	-0.2
1,055,561	+		DZA65_RS05110	0.19	+0.2
1,055,561	+		DZA65_RS05110	0.19	-0.2
1,055,562	-		DZA65_RS05110	0.19	-0.1
1,055,563	+		DZA65_RS05110	0.19	+1.9
1,055,563	+		DZA65_RS05110	0.19	-0.8
1,055,563	+		DZA65_RS05110	0.19	-0.7
1,055,563	+		DZA65_RS05110	0.19	+0.6
1,055,564	-		DZA65_RS05110	0.19	-0.6
1,055,700	+		DZA65_RS05110	0.34	+0.4
1,055,701	-		DZA65_RS05110	0.35	-0.2
1,055,805	+		DZA65_RS05110	0.46	+1.6
1,055,805	+		DZA65_RS05110	0.46	-1.4
1,055,922	+		DZA65_RS05110	0.59	+0.5
1,055,962	+		DZA65_RS05110	0.64	-0.8
1,055,963	-		DZA65_RS05110	0.64	-1.1
1,055,969	-		DZA65_RS05110	0.65	+0.6
1,056,073	+		DZA65_RS05110	0.76	-0.1
1,056,073	+		DZA65_RS05110	0.76	+0.1
1,056,110	+		DZA65_RS05110	0.80	-0.5
1,056,110	+		DZA65_RS05110	0.80	-0.9
1,056,111	-		DZA65_RS05110	0.81	-0.5
1,056,121	+		DZA65_RS05110	0.82	-1.0
1,056,121	+		DZA65_RS05110	0.82	-0.4
1,056,122	-		DZA65_RS05110	0.82	-0.3
1,056,122	-		DZA65_RS05110	0.82	-2.2
1,056,131	+		DZA65_RS05110	0.83	+0.4
1,056,132	-		DZA65_RS05110	0.83	+0.4
1,056,137	+		DZA65_RS05110	0.84	-1.0
1,056,216	+				-1.0
1,056,217	-				-0.0
1,056,239	+				-1.8
1,056,242	+				-0.8
1,056,242	+				-0.5
1,056,242	+				+0.8
1,056,243	-				+0.0
1,056,243	-				-1.1
1,056,255	+				+0.5
1,056,256	-				-0.0
1,056,257	+				+0.5
1,056,257	+				+1.2
1,056,258	-				-0.0
1,056,258	-				+0.6
1,056,258	-				-1.8
1,056,262	+				+0.2
1,056,263	-				-0.6
1,056,263	-				+0.1
1,056,281	+				-0.3
1,056,281	+				-0.5
1,056,282	-				-0.7
1,056,312	-				+0.1
1,056,413	+				-0.0
1,056,441	+				-1.5
1,056,458	-				-0.1
1,056,458	-				-1.2
1,056,484	+				-0.3
1,056,485	-				-0.2
1,056,485	-				+0.6
1,056,485	-				-0.5
1,056,485	-				+0.0
1,056,485	-				+0.7
1,056,485	-				-1.2
1,056,485	-				+0.1
1,056,486	+				-0.5
1,056,487	-				-0.6
1,056,490	-				-0.6
1,056,490	-				+1.6
1,056,603	+				-1.3
1,056,603	+				+0.6
1,056,603	+				+0.0
1,056,603	+				+0.4
1,056,603	+				-0.8
1,056,603	+				-0.2
1,056,603	+				-1.2
1,056,603	+				+0.2
1,056,638	+				-0.6
1,056,638	+				-0.2
1,056,639	-				-0.5
1,056,649	-				+0.3
1,056,715	+				-1.2
1,056,716	-				-1.1
1,056,736	-				-1.1
1,056,770	-				+0.5
1,056,778	+				+0.1
1,056,778	+				+1.8
1,056,778	+				-1.8
1,056,778	+				-0.8
1,056,779	-				-1.1
1,056,791	+				+0.4
1,056,791	+				-0.0
1,056,791	+				+0.1
1,056,791	+				+1.4
1,056,791	+				-0.2
1,056,792	-				+0.8
1,056,792	-				+1.1
1,056,792	-				-0.9
1,056,807	+				-1.8
1,056,837	+				-0.7
1,056,837	+				+0.1
1,056,837	+				-0.2
1,056,837	+				+0.3
1,056,837	+				-0.6
1,056,838	-				-1.4
1,056,838	-				-1.0
1,056,838	-				-0.2
1,056,838	-				-1.0
1,056,848	+				-0.0
1,056,848	+				-0.7
1,056,849	-				-0.6
1,056,849	-				+1.4
1,056,849	-				+1.1
1,056,859	+				+0.1
1,056,867	+				+0.2
1,056,868	-				-0.2
1,056,868	-				-0.6
1,056,949	-				+0.4
1,056,949	-				+0.6
1,056,949	-				-1.6
1,056,960	+				+0.4
1,056,960	+				+0.5
1,056,960	+				+0.8
1,056,960	+				+0.9
1,056,961	-				-0.7
1,056,965	-				-0.2
1,056,965	-				-1.2
1,057,018	+		DZA65_RS05115	0.26	+0.4
1,057,019	-		DZA65_RS05115	0.27	-0.1
1,057,076	+		DZA65_RS05115	0.47	-2.1
1,057,076	+		DZA65_RS05115	0.47	-0.1
1,057,076	+		DZA65_RS05115	0.47	-0.6
1,057,076	+		DZA65_RS05115	0.47	-1.5
1,057,076	+		DZA65_RS05115	0.47	-0.1
1,057,076	+		DZA65_RS05115	0.47	+0.8
1,057,076	+		DZA65_RS05115	0.47	-0.5
1,057,076	+		DZA65_RS05115	0.47	+0.2
1,057,076	+		DZA65_RS05115	0.47	+1.1
1,057,076	+		DZA65_RS05115	0.47	-1.0
1,057,076	+		DZA65_RS05115	0.47	-0.5
1,057,076	+		DZA65_RS05115	0.47	+0.2
1,057,076	+		DZA65_RS05115	0.47	-0.2
1,057,076	+		DZA65_RS05115	0.47	+0.0
1,057,076	+		DZA65_RS05115	0.47	+0.9
1,057,076	+		DZA65_RS05115	0.47	-0.4
1,057,076	+		DZA65_RS05115	0.47	-0.5
1,057,076	+		DZA65_RS05115	0.47	+0.5
1,057,076	+		DZA65_RS05115	0.47	+0.8
1,057,076	+		DZA65_RS05115	0.47	-0.7
1,057,076	+		DZA65_RS05115	0.47	-0.1
1,057,076	+		DZA65_RS05115	0.47	-1.1
1,057,076	+		DZA65_RS05115	0.47	+0.6
1,057,076	+		DZA65_RS05115	0.47	+0.6
1,057,076	+		DZA65_RS05115	0.47	-1.0
1,057,076	+		DZA65_RS05115	0.47	-0.5
1,057,076	+		DZA65_RS05115	0.47	+0.4
1,057,076	+		DZA65_RS05115	0.47	+1.6
1,057,077	-		DZA65_RS05115	0.47	+0.1
1,057,077	-		DZA65_RS05115	0.47	-0.6
1,057,077	-		DZA65_RS05115	0.47	+0.2
1,057,077	-		DZA65_RS05115	0.47	-0.6
1,057,077	-		DZA65_RS05115	0.47	-0.8
1,057,077	-		DZA65_RS05115	0.47	-0.5
1,057,077	-		DZA65_RS05115	0.47	+0.9
1,057,077	-		DZA65_RS05115	0.47	-1.2
1,057,077	-		DZA65_RS05115	0.47	-1.8
1,057,077	-		DZA65_RS05115	0.47	-0.6
1,057,077	-		DZA65_RS05115	0.47	-0.2
1,057,077	-		DZA65_RS05115	0.47	+1.1
1,057,077	-		DZA65_RS05115	0.47	-0.3
1,057,077	-		DZA65_RS05115	0.47	-0.3
1,057,077	-				+1.4
1,057,077	-		DZA65_RS05115	0.47	+2.5
1,057,148	-		DZA65_RS05115	0.72	+0.5
1,057,177	+		DZA65_RS05115	0.83	+0.8
1,057,177	+				+0.4
1,057,177	+		DZA65_RS05115	0.83	+0.3
1,057,177	+		DZA65_RS05115	0.83	-1.0
1,057,177	+		DZA65_RS05115	0.83	-1.5
1,057,177	+		DZA65_RS05115	0.83	-0.2
1,057,177	+		DZA65_RS05115	0.83	+1.0
1,057,178	-		DZA65_RS05115	0.83	-0.4
1,057,178	-		DZA65_RS05115	0.83	-0.3
1,057,178	-		DZA65_RS05115	0.83	-1.6
1,057,178	-				-0.6
1,057,179	+		DZA65_RS05115	0.83	+0.0
1,057,179	+		DZA65_RS05115	0.83	+0.9
1,057,179	+		DZA65_RS05115	0.83	+0.9
1,057,179	+		DZA65_RS05115	0.83	-1.2
1,057,179	+		DZA65_RS05115	0.83	-1.0
1,057,180	-		DZA65_RS05115	0.84	-0.9
1,057,180	-		DZA65_RS05115	0.84	-0.5
1,057,180	-		DZA65_RS05115	0.84	-0.6
1,057,180	-		DZA65_RS05115	0.84	+0.1
1,057,203	-				+0.1
1,057,223	+				+0.1
1,057,224	-				+1.4
1,057,224	-				+0.1