Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03345 and DZA65_RS03355 are separated by 466 nucleotides DZA65_RS03355 and DZA65_RS03360 are separated by 340 nucleotides
DZA65_RS03345: DZA65_RS03345 - cysteine synthase family protein, at 707,797 to 708,735
_RS03345
DZA65_RS03355: DZA65_RS03355 - hypothetical protein, at 709,202 to 709,573
_RS03355
DZA65_RS03360: DZA65_RS03360 - restriction endonuclease subunit S, at 709,914 to 711,028
_RS03360
Position (kb) 709
710 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 708.252 kb on + strand, within DZA65_RS03345 at 708.348 kb on + strand, within DZA65_RS03345 at 708.349 kb on - strand, within DZA65_RS03345 at 708.608 kb on - strand, within DZA65_RS03345 at 708.619 kb on - strand, within DZA65_RS03345 at 708.700 kb on + strand at 708.703 kb on + strand at 708.704 kb on - strand at 708.718 kb on + strand at 708.746 kb on + strand at 708.752 kb on - strand at 708.767 kb on + strand at 708.769 kb on + strand at 708.769 kb on + strand at 708.770 kb on - strand at 708.785 kb on + strand at 708.885 kb on - strand at 708.898 kb on + strand at 708.898 kb on + strand at 708.901 kb on + strand at 708.902 kb on - strand at 708.904 kb on - strand at 708.906 kb on + strand at 708.907 kb on - strand at 708.907 kb on - strand at 708.908 kb on + strand at 708.909 kb on - strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.973 kb on + strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 708.974 kb on - strand at 709.029 kb on + strand at 709.030 kb on - strand at 709.038 kb on + strand at 709.038 kb on + strand at 709.137 kb on - strand at 709.245 kb on - strand, within DZA65_RS03355 at 709.284 kb on + strand, within DZA65_RS03355 at 709.284 kb on + strand, within DZA65_RS03355 at 709.285 kb on - strand, within DZA65_RS03355 at 709.491 kb on + strand, within DZA65_RS03355 at 709.537 kb on + strand at 709.537 kb on + strand at 709.538 kb on - strand at 709.538 kb on - strand at 709.542 kb on - strand at 709.574 kb on - strand at 709.588 kb on + strand at 709.588 kb on + strand at 709.588 kb on + strand at 709.589 kb on - strand at 709.667 kb on - strand at 709.719 kb on + strand at 709.719 kb on + strand at 709.720 kb on - strand at 709.720 kb on - strand at 709.737 kb on - strand at 709.771 kb on + strand at 709.776 kb on + strand at 709.776 kb on + strand at 709.776 kb on + strand at 709.776 kb on + strand at 709.776 kb on + strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.777 kb on - strand at 709.778 kb on + strand at 709.778 kb on + strand at 709.779 kb on - strand at 709.779 kb on - strand at 709.779 kb on - strand at 709.829 kb on + strand at 709.829 kb on + strand at 709.830 kb on - strand at 709.915 kb on + strand at 709.915 kb on + strand at 709.916 kb on - strand at 709.916 kb on - strand at 709.916 kb on - strand at 709.916 kb on - strand at 709.975 kb on - strand at 709.995 kb on + strand at 710.013 kb on - strand at 710.029 kb on + strand, within DZA65_RS03360 at 710.030 kb on - strand, within DZA65_RS03360 at 710.030 kb on - strand, within DZA65_RS03360 at 710.047 kb on - strand, within DZA65_RS03360 at 710.063 kb on + strand, within DZA65_RS03360 at 710.064 kb on - strand, within DZA65_RS03360 at 710.067 kb on + strand, within DZA65_RS03360 at 710.068 kb on - strand, within DZA65_RS03360 at 710.068 kb on - strand, within DZA65_RS03360 at 710.117 kb on + strand, within DZA65_RS03360 at 710.117 kb on + strand, within DZA65_RS03360 at 710.174 kb on + strand, within DZA65_RS03360 at 710.207 kb on - strand, within DZA65_RS03360 at 710.253 kb on - strand, within DZA65_RS03360 at 710.256 kb on + strand, within DZA65_RS03360 at 710.299 kb on - strand, within DZA65_RS03360 at 710.303 kb on - strand, within DZA65_RS03360 at 710.320 kb on - strand, within DZA65_RS03360 at 710.340 kb on + strand, within DZA65_RS03360 at 710.341 kb on - strand, within DZA65_RS03360 at 710.412 kb on + strand, within DZA65_RS03360 at 710.462 kb on + strand, within DZA65_RS03360 at 710.463 kb on - strand, within DZA65_RS03360 at 710.463 kb on - strand, within DZA65_RS03360 at 710.464 kb on + strand, within DZA65_RS03360 at 710.465 kb on - strand, within DZA65_RS03360 at 710.492 kb on - strand, within DZA65_RS03360 at 710.537 kb on - strand, within DZA65_RS03360 at 710.543 kb on - strand, within DZA65_RS03360
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 708,252 + DZA65_RS03345 0.48 -0.1 708,348 + DZA65_RS03345 0.59 +1.7 708,349 - DZA65_RS03345 0.59 +0.5 708,608 - DZA65_RS03345 0.86 +0.5 708,619 - DZA65_RS03345 0.88 -0.5 708,700 + -0.7 708,703 + -2.0 708,704 - -0.4 708,718 + -1.0 708,746 + -1.2 708,752 - -0.1 708,767 + -0.6 708,769 + +1.2 708,769 + +0.7 708,770 - +0.1 708,785 + -1.4 708,885 - -0.6 708,898 + -0.7 708,898 + -1.2 708,901 + -0.6 708,902 - +1.2 708,904 - -0.5 708,906 + -0.8 708,907 - -1.3 708,907 - +0.2 708,908 + +1.5 708,909 - -0.4 708,973 + -0.7 708,973 + -0.4 708,973 + -1.5 708,973 + +1.5 708,973 + +0.1 708,973 + +1.2 708,973 + +0.2 708,973 + -0.9 708,973 + -1.2 708,973 + -0.6 708,973 + +0.1 708,973 + +0.5 708,973 + -0.0 708,973 + -0.4 708,973 + -0.3 708,974 - +0.5 708,974 - +0.8 708,974 - -1.9 708,974 - +0.5 708,974 - +0.5 708,974 - -1.1 708,974 - -1.0 708,974 - -1.0 709,029 + -0.5 709,030 - +0.5 709,038 + -0.1 709,038 + +1.0 709,137 - -0.5 709,245 - DZA65_RS03355 0.12 -0.8 709,284 + DZA65_RS03355 0.22 -1.7 709,284 + DZA65_RS03355 0.22 -1.4 709,285 - DZA65_RS03355 0.22 -0.5 709,491 + DZA65_RS03355 0.78 -0.5 709,537 + -0.5 709,537 + -0.1 709,538 - -0.1 709,538 - -0.4 709,542 - -0.9 709,574 - +1.3 709,588 + -0.2 709,588 + -0.4 709,588 + -1.1 709,589 - -1.0 709,667 - -0.7 709,719 + +0.2 709,719 + +0.4 709,720 - +0.1 709,720 - -0.5 709,737 - -0.9 709,771 + +0.8 709,776 + -0.5 709,776 + -0.9 709,776 + -0.5 709,776 + +0.8 709,776 + +0.5 709,777 - +0.1 709,777 - +0.6 709,777 - -0.7 709,777 - +0.5 709,777 - -0.0 709,777 - -0.4 709,777 - -0.9 709,778 + -0.5 709,778 + +0.3 709,779 - -0.2 709,779 - +0.2 709,779 - -1.0 709,829 + +0.7 709,829 + -0.6 709,830 - -0.2 709,915 + +0.1 709,915 + +1.7 709,916 - -0.1 709,916 - +0.0 709,916 - -1.4 709,916 - -0.1 709,975 - +0.1 709,995 + +0.9 710,013 - -1.1 710,029 + DZA65_RS03360 0.10 -0.9 710,030 - DZA65_RS03360 0.10 -0.4 710,030 - DZA65_RS03360 0.10 +1.1 710,047 - DZA65_RS03360 0.12 -0.2 710,063 + DZA65_RS03360 0.13 +1.5 710,064 - DZA65_RS03360 0.13 +1.0 710,067 + DZA65_RS03360 0.14 +0.9 710,068 - DZA65_RS03360 0.14 +1.0 710,068 - DZA65_RS03360 0.14 -0.4 710,117 + DZA65_RS03360 0.18 -0.7 710,117 + DZA65_RS03360 0.18 +0.6 710,174 + DZA65_RS03360 0.23 +0.9 710,207 - DZA65_RS03360 0.26 -0.3 710,253 - DZA65_RS03360 0.30 -0.5 710,256 + DZA65_RS03360 0.31 -2.1 710,299 - DZA65_RS03360 0.35 -0.8 710,303 - DZA65_RS03360 0.35 +0.5 710,320 - DZA65_RS03360 0.36 +0.1 710,340 + DZA65_RS03360 0.38 +0.3 710,341 - DZA65_RS03360 0.38 +0.1 710,412 + DZA65_RS03360 0.45 -2.0 710,462 + DZA65_RS03360 0.49 -2.9 710,463 - DZA65_RS03360 0.49 -0.0 710,463 - DZA65_RS03360 0.49 -0.9 710,464 + DZA65_RS03360 0.49 -1.9 710,465 - DZA65_RS03360 0.49 +0.0 710,492 - DZA65_RS03360 0.52 +1.0 710,537 - DZA65_RS03360 0.56 -1.4 710,543 - DZA65_RS03360 0.56 -1.0
Or see this region's nucleotide sequence