Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS03260 and DZA65_RS03265 are separated by 108 nucleotides DZA65_RS03265 and DZA65_RS03270 are separated by 12 nucleotides
DZA65_RS03260: DZA65_RS03260 - lipoprotein NlpI, at 691,853 to 692,737
_RS03260
DZA65_RS03265: DZA65_RS03265 - protein YrbN, at 692,846 to 692,905
_RS03265
DZA65_RS03270: DZA65_RS03270 - DEAD/DEAH family ATP-dependent RNA helicase, at 692,918 to 694,804
_RS03270
Position (kb) 692
693 Strain fitness (log2 ratio) -2
-1
0
1
2 at 691.877 kb on + strand at 691.877 kb on + strand at 691.878 kb on - strand at 691.878 kb on - strand at 691.878 kb on - strand at 691.894 kb on + strand at 691.894 kb on + strand at 691.895 kb on - strand at 691.895 kb on - strand at 692.021 kb on - strand at 692.046 kb on + strand, within DZA65_RS03260 at 692.046 kb on + strand, within DZA65_RS03260 at 692.047 kb on - strand, within DZA65_RS03260 at 692.047 kb on - strand, within DZA65_RS03260 at 692.048 kb on + strand, within DZA65_RS03260 at 692.049 kb on - strand, within DZA65_RS03260 at 692.049 kb on - strand, within DZA65_RS03260 at 692.066 kb on + strand, within DZA65_RS03260 at 692.066 kb on + strand, within DZA65_RS03260 at 692.066 kb on + strand, within DZA65_RS03260 at 692.066 kb on + strand, within DZA65_RS03260 at 692.066 kb on + strand, within DZA65_RS03260 at 692.135 kb on - strand, within DZA65_RS03260 at 692.153 kb on + strand, within DZA65_RS03260 at 692.165 kb on + strand, within DZA65_RS03260 at 692.244 kb on - strand, within DZA65_RS03260 at 692.364 kb on - strand, within DZA65_RS03260 at 692.421 kb on - strand at 692.506 kb on + strand, within DZA65_RS03260 at 692.506 kb on + strand, within DZA65_RS03260 at 692.508 kb on + strand, within DZA65_RS03260 at 692.509 kb on - strand, within DZA65_RS03260 at 692.509 kb on - strand, within DZA65_RS03260 at 692.521 kb on + strand, within DZA65_RS03260 at 692.567 kb on + strand, within DZA65_RS03260 at 692.567 kb on + strand, within DZA65_RS03260 at 692.567 kb on + strand, within DZA65_RS03260 at 692.567 kb on + strand, within DZA65_RS03260 at 692.568 kb on - strand, within DZA65_RS03260 at 692.582 kb on + strand, within DZA65_RS03260 at 692.582 kb on + strand at 692.583 kb on - strand, within DZA65_RS03260 at 692.586 kb on + strand, within DZA65_RS03260 at 692.587 kb on - strand, within DZA65_RS03260 at 692.587 kb on - strand, within DZA65_RS03260 at 692.715 kb on + strand at 692.715 kb on + strand at 692.735 kb on + strand at 692.735 kb on + strand at 692.735 kb on + strand at 692.735 kb on + strand at 692.735 kb on + strand at 692.735 kb on + strand at 692.786 kb on + strand at 692.790 kb on - strand at 692.862 kb on - strand, within DZA65_RS03265 at 692.881 kb on + strand, within DZA65_RS03265 at 692.881 kb on + strand, within DZA65_RS03265 at 693.856 kb on + strand, within DZA65_RS03270
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 691,877 + +0.5 691,877 + +1.5 691,878 - +0.5 691,878 - -0.5 691,878 - -0.1 691,894 + +1.5 691,894 + -0.9 691,895 - -0.5 691,895 - -2.1 692,021 - +1.5 692,046 + DZA65_RS03260 0.22 +0.9 692,046 + DZA65_RS03260 0.22 +0.5 692,047 - DZA65_RS03260 0.22 +1.5 692,047 - DZA65_RS03260 0.22 -0.1 692,048 + DZA65_RS03260 0.22 -1.1 692,049 - DZA65_RS03260 0.22 -0.9 692,049 - DZA65_RS03260 0.22 +1.1 692,066 + DZA65_RS03260 0.24 +1.0 692,066 + DZA65_RS03260 0.24 -0.5 692,066 + DZA65_RS03260 0.24 +1.5 692,066 + DZA65_RS03260 0.24 +0.5 692,066 + DZA65_RS03260 0.24 -0.1 692,135 - DZA65_RS03260 0.32 +2.5 692,153 + DZA65_RS03260 0.34 +0.5 692,165 + DZA65_RS03260 0.35 +1.5 692,244 - DZA65_RS03260 0.44 -0.1 692,364 - DZA65_RS03260 0.58 +0.5 692,421 - -0.5 692,506 + DZA65_RS03260 0.74 -0.4 692,506 + DZA65_RS03260 0.74 -0.7 692,508 + DZA65_RS03260 0.74 -2.2 692,509 - DZA65_RS03260 0.74 -0.9 692,509 - DZA65_RS03260 0.74 +0.5 692,521 + DZA65_RS03260 0.75 -0.9 692,567 + DZA65_RS03260 0.81 +0.2 692,567 + DZA65_RS03260 0.81 -0.5 692,567 + DZA65_RS03260 0.81 +0.8 692,567 + DZA65_RS03260 0.81 -0.1 692,568 - DZA65_RS03260 0.81 -0.1 692,582 + DZA65_RS03260 0.82 +0.5 692,582 + +1.5 692,583 - DZA65_RS03260 0.82 -0.7 692,586 + DZA65_RS03260 0.83 +0.5 692,587 - DZA65_RS03260 0.83 -1.1 692,587 - DZA65_RS03260 0.83 +1.8 692,715 + -0.1 692,715 + -1.7 692,735 + +0.5 692,735 + -1.1 692,735 + -0.5 692,735 + -0.3 692,735 + -0.3 692,735 + -0.0 692,786 + +0.5 692,790 - -0.1 692,862 - DZA65_RS03265 0.27 -0.0 692,881 + DZA65_RS03265 0.58 -0.5 692,881 + DZA65_RS03265 0.58 -1.6 693,856 + DZA65_RS03270 0.50 -0.4
Or see this region's nucleotide sequence