Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02465 and DZA65_RS02475 are separated by 338 nucleotides DZA65_RS02475 and DZA65_RS02480 are separated by 13 nucleotides DZA65_RS02480 and DZA65_RS02485 are separated by 71 nucleotides
DZA65_RS02465: DZA65_RS02465 - cell division protein ZapA, at 531,673 to 532,002
_RS02465
DZA65_RS02475: DZA65_RS02475 - 5-formyltetrahydrofolate cyclo-ligase, at 532,341 to 532,955
_RS02475
DZA65_RS02480: DZA65_RS02480 - multifunctional transcriptional regulator/nicotinamide-nucleotide adenylyltransferase/ribosylnicotinamide kinase NadR, at 532,969 to 534,225
_RS02480
DZA65_RS02485: DZA65_RS02485 - DNA repair protein RadA, at 534,297 to 535,682
_RS02485
Position (kb) 532
533
534
535 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 531.969 kb on + strand, within DZA65_RS02465 at 531.969 kb on + strand, within DZA65_RS02465 at 531.969 kb on + strand, within DZA65_RS02465 at 531.970 kb on - strand at 531.970 kb on - strand at 531.973 kb on - strand at 532.001 kb on - strand at 532.001 kb on - strand at 532.024 kb on + strand at 532.025 kb on - strand at 532.025 kb on - strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.062 kb on + strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.063 kb on - strand at 532.128 kb on + strand at 532.129 kb on - strand at 532.148 kb on - strand at 532.157 kb on + strand at 532.158 kb on - strand at 532.194 kb on - strand at 532.239 kb on - strand at 532.239 kb on - strand at 532.277 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.297 kb on + strand at 532.310 kb on + strand at 532.311 kb on - strand at 532.311 kb on - strand at 532.311 kb on - strand at 532.319 kb on - strand at 532.387 kb on + strand at 532.388 kb on - strand at 532.596 kb on + strand, within DZA65_RS02475 at 532.596 kb on + strand, within DZA65_RS02475 at 532.596 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.642 kb on + strand, within DZA65_RS02475 at 532.643 kb on - strand, within DZA65_RS02475 at 532.807 kb on - strand, within DZA65_RS02475 at 532.807 kb on - strand, within DZA65_RS02475 at 532.958 kb on + strand at 532.958 kb on + strand at 532.971 kb on - strand at 533.054 kb on + strand at 533.054 kb on + strand at 533.078 kb on + strand at 533.078 kb on + strand at 533.078 kb on + strand at 533.078 kb on + strand at 533.078 kb on + strand at 533.079 kb on - strand at 533.079 kb on - strand at 533.079 kb on - strand at 533.079 kb on - strand at 533.079 kb on - strand at 533.083 kb on + strand at 533.083 kb on + strand at 533.084 kb on - strand at 533.084 kb on - strand at 533.084 kb on - strand at 533.103 kb on + strand, within DZA65_RS02480 at 533.103 kb on + strand, within DZA65_RS02480 at 533.103 kb on + strand, within DZA65_RS02480 at 533.103 kb on + strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.104 kb on - strand, within DZA65_RS02480 at 533.109 kb on + strand, within DZA65_RS02480 at 533.109 kb on + strand, within DZA65_RS02480 at 533.109 kb on + strand, within DZA65_RS02480 at 533.109 kb on + strand, within DZA65_RS02480 at 533.109 kb on + strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.110 kb on - strand, within DZA65_RS02480 at 533.262 kb on - strand, within DZA65_RS02480 at 533.426 kb on + strand at 533.426 kb on + strand, within DZA65_RS02480 at 533.426 kb on + strand, within DZA65_RS02480 at 533.426 kb on + strand, within DZA65_RS02480 at 533.426 kb on + strand, within DZA65_RS02480 at 533.426 kb on + strand, within DZA65_RS02480 at 533.427 kb on - strand, within DZA65_RS02480 at 533.427 kb on - strand, within DZA65_RS02480 at 533.427 kb on - strand, within DZA65_RS02480 at 533.427 kb on - strand, within DZA65_RS02480 at 533.439 kb on - strand, within DZA65_RS02480 at 533.439 kb on - strand, within DZA65_RS02480 at 533.467 kb on - strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.562 kb on + strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.563 kb on - strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.564 kb on + strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.565 kb on - strand, within DZA65_RS02480 at 533.574 kb on - strand, within DZA65_RS02480 at 533.616 kb on + strand at 533.616 kb on + strand, within DZA65_RS02480 at 533.617 kb on - strand, within DZA65_RS02480 at 533.617 kb on - strand, within DZA65_RS02480 at 533.617 kb on - strand, within DZA65_RS02480 at 533.669 kb on + strand, within DZA65_RS02480 at 533.670 kb on - strand, within DZA65_RS02480 at 533.670 kb on - strand, within DZA65_RS02480 at 533.670 kb on - strand, within DZA65_RS02480 at 533.670 kb on - strand, within DZA65_RS02480 at 533.699 kb on + strand, within DZA65_RS02480 at 533.700 kb on - strand, within DZA65_RS02480 at 533.829 kb on - strand, within DZA65_RS02480 at 533.905 kb on + strand, within DZA65_RS02480 at 533.906 kb on - strand, within DZA65_RS02480 at 533.906 kb on - strand, within DZA65_RS02480 at 533.953 kb on + strand, within DZA65_RS02480 at 533.954 kb on - strand, within DZA65_RS02480 at 533.954 kb on - strand, within DZA65_RS02480 at 533.981 kb on + strand, within DZA65_RS02480 at 533.981 kb on + strand, within DZA65_RS02480 at 533.982 kb on - strand, within DZA65_RS02480 at 533.982 kb on - strand, within DZA65_RS02480 at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.130 kb on + strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.131 kb on - strand at 534.134 kb on + strand at 534.148 kb on - strand at 534.209 kb on + strand at 534.209 kb on + strand at 534.209 kb on + strand at 534.210 kb on - strand at 534.215 kb on + strand at 534.215 kb on + strand at 534.215 kb on + strand at 534.216 kb on - strand at 534.233 kb on + strand at 534.234 kb on - strand at 534.263 kb on + strand at 534.263 kb on + strand at 534.263 kb on + strand at 534.263 kb on + strand at 534.263 kb on + strand at 534.263 kb on + strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.264 kb on - strand at 534.266 kb on + strand at 534.266 kb on + strand at 534.266 kb on + strand at 534.267 kb on - strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.281 kb on + strand at 534.282 kb on - strand at 534.282 kb on - strand at 534.282 kb on - strand at 534.282 kb on - strand at 534.282 kb on - strand at 534.282 kb on - strand at 534.298 kb on + strand at 534.298 kb on + strand at 534.381 kb on - strand at 534.381 kb on - strand at 534.663 kb on - strand, within DZA65_RS02485 at 534.874 kb on - strand, within DZA65_RS02485 at 534.971 kb on + strand, within DZA65_RS02485 at 534.971 kb on + strand, within DZA65_RS02485 at 534.971 kb on + strand, within DZA65_RS02485 at 534.972 kb on - strand, within DZA65_RS02485 at 534.972 kb on - strand at 535.072 kb on + strand, within DZA65_RS02485 at 535.073 kb on - strand, within DZA65_RS02485
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 531,969 + DZA65_RS02465 0.90 -0.5 531,969 + DZA65_RS02465 0.90 -1.2 531,969 + DZA65_RS02465 0.90 +0.4 531,970 - +0.0 531,970 - -0.5 531,973 - +0.1 532,001 - +0.7 532,001 - +0.1 532,024 + +1.8 532,025 - -0.2 532,025 - -0.3 532,062 + +0.2 532,062 + +0.4 532,062 + -1.6 532,062 + -0.5 532,063 - -0.6 532,063 - +0.6 532,063 - -0.6 532,063 - -0.6 532,063 - +0.1 532,063 - +0.1 532,063 - -0.5 532,063 - -0.3 532,128 + -0.6 532,129 - +0.1 532,148 - -0.5 532,157 + -2.7 532,158 - +0.6 532,194 - +0.0 532,239 - -0.3 532,239 - +0.9 532,277 + -0.8 532,297 + -0.6 532,297 + -0.0 532,297 + -0.0 532,297 + -0.3 532,297 + -0.2 532,310 + -1.1 532,311 - -1.1 532,311 - -0.2 532,311 - -0.3 532,319 - +0.5 532,387 + -1.2 532,388 - -1.2 532,596 + DZA65_RS02475 0.41 +0.4 532,596 + DZA65_RS02475 0.41 +0.2 532,596 + DZA65_RS02475 0.41 +0.2 532,642 + DZA65_RS02475 0.49 +0.2 532,642 + DZA65_RS02475 0.49 -0.2 532,642 + DZA65_RS02475 0.49 -0.1 532,643 - DZA65_RS02475 0.49 +0.2 532,807 - DZA65_RS02475 0.76 +0.3 532,807 - DZA65_RS02475 0.76 -0.7 532,958 + +1.2 532,958 + +0.2 532,971 - -0.4 533,054 + -0.1 533,054 + -1.1 533,078 + +0.4 533,078 + -1.1 533,078 + +0.0 533,078 + -0.1 533,078 + -1.2 533,079 - -2.1 533,079 - -0.3 533,079 - -0.4 533,079 - +0.4 533,079 - +0.5 533,083 + +0.7 533,083 + -1.7 533,084 - -0.6 533,084 - +0.3 533,084 - -0.6 533,103 + DZA65_RS02480 0.11 -1.5 533,103 + DZA65_RS02480 0.11 -0.8 533,103 + DZA65_RS02480 0.11 +0.5 533,103 + DZA65_RS02480 0.11 +0.9 533,104 - DZA65_RS02480 0.11 +0.9 533,104 - DZA65_RS02480 0.11 +1.1 533,104 - DZA65_RS02480 0.11 -2.3 533,104 - DZA65_RS02480 0.11 +0.1 533,104 - DZA65_RS02480 0.11 -0.2 533,104 - DZA65_RS02480 0.11 -0.3 533,109 + DZA65_RS02480 0.11 -1.8 533,109 + DZA65_RS02480 0.11 +0.2 533,109 + DZA65_RS02480 0.11 -0.5 533,109 + DZA65_RS02480 0.11 +0.9 533,109 + DZA65_RS02480 0.11 +0.2 533,110 - DZA65_RS02480 0.11 -1.0 533,110 - DZA65_RS02480 0.11 -0.1 533,110 - DZA65_RS02480 0.11 +0.5 533,110 - DZA65_RS02480 0.11 -0.6 533,110 - DZA65_RS02480 0.11 -0.8 533,110 - DZA65_RS02480 0.11 -0.5 533,110 - DZA65_RS02480 0.11 -1.3 533,262 - DZA65_RS02480 0.23 -1.5 533,426 + +3.1 533,426 + DZA65_RS02480 0.36 -0.1 533,426 + DZA65_RS02480 0.36 -2.0 533,426 + DZA65_RS02480 0.36 -1.0 533,426 + DZA65_RS02480 0.36 -0.5 533,426 + DZA65_RS02480 0.36 -1.3 533,427 - DZA65_RS02480 0.36 -0.5 533,427 - DZA65_RS02480 0.36 -0.1 533,427 - DZA65_RS02480 0.36 +0.0 533,427 - DZA65_RS02480 0.36 -0.7 533,439 - DZA65_RS02480 0.37 +1.5 533,439 - DZA65_RS02480 0.37 -0.6 533,467 - DZA65_RS02480 0.40 -1.4 533,562 + DZA65_RS02480 0.47 -0.5 533,562 + DZA65_RS02480 0.47 +0.9 533,562 + DZA65_RS02480 0.47 +0.3 533,562 + DZA65_RS02480 0.47 -0.2 533,562 + DZA65_RS02480 0.47 -0.7 533,562 + DZA65_RS02480 0.47 -1.1 533,562 + DZA65_RS02480 0.47 -1.3 533,562 + DZA65_RS02480 0.47 +0.2 533,562 + DZA65_RS02480 0.47 +0.9 533,563 - DZA65_RS02480 0.47 +0.9 533,563 - +1.8 533,563 - DZA65_RS02480 0.47 +1.1 533,563 - DZA65_RS02480 0.47 -0.5 533,563 - DZA65_RS02480 0.47 -1.0 533,563 - DZA65_RS02480 0.47 +1.1 533,563 - DZA65_RS02480 0.47 +0.5 533,563 - DZA65_RS02480 0.47 -0.1 533,563 - DZA65_RS02480 0.47 -0.5 533,563 - DZA65_RS02480 0.47 +0.1 533,564 + DZA65_RS02480 0.47 -1.3 533,564 + DZA65_RS02480 0.47 -0.1 533,564 + DZA65_RS02480 0.47 +0.2 533,564 + DZA65_RS02480 0.47 +0.8 533,564 + DZA65_RS02480 0.47 -0.0 533,564 + DZA65_RS02480 0.47 +0.5 533,565 - DZA65_RS02480 0.47 +0.9 533,565 - DZA65_RS02480 0.47 -0.7 533,565 - DZA65_RS02480 0.47 -1.8 533,565 - DZA65_RS02480 0.47 -0.8 533,565 - DZA65_RS02480 0.47 +1.0 533,565 - DZA65_RS02480 0.47 +0.0 533,565 - DZA65_RS02480 0.47 -0.8 533,565 - DZA65_RS02480 0.47 -1.1 533,574 - DZA65_RS02480 0.48 +0.1 533,616 + +0.5 533,616 + DZA65_RS02480 0.51 -0.6 533,617 - DZA65_RS02480 0.52 -0.4 533,617 - DZA65_RS02480 0.52 +0.5 533,617 - DZA65_RS02480 0.52 +0.6 533,669 + DZA65_RS02480 0.56 +0.3 533,670 - DZA65_RS02480 0.56 +0.1 533,670 - DZA65_RS02480 0.56 -0.6 533,670 - DZA65_RS02480 0.56 -1.7 533,670 - DZA65_RS02480 0.56 -1.1 533,699 + DZA65_RS02480 0.58 +0.6 533,700 - DZA65_RS02480 0.58 +0.6 533,829 - DZA65_RS02480 0.68 -1.4 533,905 + DZA65_RS02480 0.74 -0.6 533,906 - DZA65_RS02480 0.75 -0.5 533,906 - DZA65_RS02480 0.75 +0.4 533,953 + DZA65_RS02480 0.78 -0.3 533,954 - DZA65_RS02480 0.78 +0.5 533,954 - DZA65_RS02480 0.78 +1.1 533,981 + DZA65_RS02480 0.81 -0.3 533,981 + DZA65_RS02480 0.81 -1.3 533,982 - DZA65_RS02480 0.81 -1.9 533,982 - DZA65_RS02480 0.81 -0.5 534,130 + +1.2 534,130 + +1.2 534,130 + +0.4 534,130 + -0.3 534,130 + -0.5 534,130 + -1.3 534,131 - +0.3 534,131 - -1.8 534,131 - -0.5 534,131 - +0.5 534,134 + -0.2 534,148 - -1.4 534,209 + -1.3 534,209 + -0.2 534,209 + -0.1 534,210 - +0.8 534,215 + -1.3 534,215 + +1.2 534,215 + +1.5 534,216 - +0.3 534,233 + +0.9 534,234 - -0.1 534,263 + -0.2 534,263 + -3.0 534,263 + +1.2 534,263 + -0.4 534,263 + -0.3 534,263 + +0.9 534,264 - -0.5 534,264 - +1.4 534,264 - +1.2 534,264 - +0.6 534,264 - -1.0 534,264 - -0.8 534,264 - +1.0 534,266 + -0.7 534,266 + -0.2 534,266 + -1.9 534,267 - +0.1 534,281 + +1.1 534,281 + -0.8 534,281 + -1.1 534,281 + -2.1 534,281 + +1.3 534,281 + -0.8 534,281 + -0.7 534,282 - +0.6 534,282 - -0.3 534,282 - -1.5 534,282 - +0.1 534,282 - -1.1 534,282 - -1.4 534,298 + -0.5 534,298 + -0.5 534,381 - -1.5 534,381 - -1.1 534,663 - DZA65_RS02485 0.26 -0.3 534,874 - DZA65_RS02485 0.42 -0.2 534,971 + DZA65_RS02485 0.49 +0.2 534,971 + DZA65_RS02485 0.49 +0.4 534,971 + DZA65_RS02485 0.49 +0.2 534,972 - DZA65_RS02485 0.49 +0.5 534,972 - +1.1 535,072 + DZA65_RS02485 0.56 +1.5 535,073 - DZA65_RS02485 0.56 +0.3
Or see this region's nucleotide sequence