Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS02060 and DZA65_RS02065 are separated by 283 nucleotides DZA65_RS02065 and DZA65_RS02070 are separated by 1 nucleotides
DZA65_RS02060: DZA65_RS02060 - leucyl aminopeptidase, at 454,353 to 455,861
_RS02060
DZA65_RS02065: DZA65_RS02065 - LPS export ABC transporter permease LptF, at 456,145 to 457,263
_RS02065
DZA65_RS02070: DZA65_RS02070 - LPS export ABC transporter permease LptG, at 457,265 to 458,335
_RS02070
Position (kb) 456
457
458 Strain fitness (log2 ratio) -1
0
1
2
3
4 at 455.448 kb on - strand, within DZA65_RS02060 at 455.449 kb on + strand, within DZA65_RS02060 at 455.450 kb on - strand, within DZA65_RS02060 at 455.511 kb on + strand, within DZA65_RS02060 at 455.511 kb on + strand at 455.512 kb on - strand, within DZA65_RS02060 at 455.512 kb on - strand, within DZA65_RS02060 at 455.512 kb on - strand, within DZA65_RS02060 at 455.512 kb on - strand, within DZA65_RS02060 at 455.667 kb on + strand, within DZA65_RS02060 at 455.668 kb on - strand, within DZA65_RS02060 at 455.864 kb on - strand at 455.899 kb on - strand at 455.905 kb on - strand at 455.949 kb on - strand at 455.958 kb on + strand at 455.959 kb on - strand at 455.959 kb on - strand at 455.959 kb on - strand at 455.964 kb on - strand at 455.992 kb on + strand at 456.009 kb on + strand at 456.035 kb on + strand at 456.035 kb on + strand at 456.050 kb on + strand at 456.074 kb on + strand at 456.074 kb on + strand at 456.074 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 455,448 - DZA65_RS02060 0.73 -0.8 455,449 + DZA65_RS02060 0.73 -1.1 455,450 - DZA65_RS02060 0.73 -1.7 455,511 + DZA65_RS02060 0.77 -1.1 455,511 + +2.1 455,512 - DZA65_RS02060 0.77 -0.6 455,512 - DZA65_RS02060 0.77 -1.6 455,512 - DZA65_RS02060 0.77 -1.1 455,512 - DZA65_RS02060 0.77 +0.3 455,667 + DZA65_RS02060 0.87 +1.5 455,668 - DZA65_RS02060 0.87 -0.8 455,864 - -1.3 455,899 - -1.7 455,905 - +4.3 455,949 - -0.1 455,958 + -0.8 455,959 - +2.9 455,959 - -0.9 455,959 - -1.3 455,964 - -1.1 455,992 + +0.5 456,009 + -0.4 456,035 + -0.2 456,035 + -1.0 456,050 + -0.5 456,074 + -0.3 456,074 + -1.0 456,074 + +0.7
Or see this region's nucleotide sequence