Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS01365 and DZA65_RS01370 overlap by 11 nucleotides DZA65_RS01370 and DZA65_RS01375 are separated by 191 nucleotides
DZA65_RS01365: DZA65_RS01365 - sodium/pantothenate symporter, at 300,862 to 302,313
_RS01365
DZA65_RS01370: DZA65_RS01370 - YhdT family protein, at 302,303 to 302,545
_RS01370
DZA65_RS01375: DZA65_RS01375 - acetyl-CoA carboxylase biotin carboxylase subunit, at 302,737 to 304,080
_RS01375
Position (kb) 302
303 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 301.455 kb on + strand, within DZA65_RS01365 at 301.468 kb on + strand, within DZA65_RS01365 at 301.700 kb on + strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.701 kb on - strand, within DZA65_RS01365 at 301.704 kb on + strand, within DZA65_RS01365 at 301.704 kb on + strand, within DZA65_RS01365 at 301.704 kb on + strand, within DZA65_RS01365 at 301.705 kb on - strand, within DZA65_RS01365 at 301.753 kb on + strand, within DZA65_RS01365 at 301.799 kb on + strand, within DZA65_RS01365 at 301.812 kb on + strand, within DZA65_RS01365 at 301.839 kb on + strand, within DZA65_RS01365 at 301.840 kb on - strand, within DZA65_RS01365 at 301.840 kb on - strand, within DZA65_RS01365 at 301.840 kb on - strand, within DZA65_RS01365 at 301.840 kb on - strand, within DZA65_RS01365 at 301.840 kb on - strand, within DZA65_RS01365 at 301.841 kb on + strand, within DZA65_RS01365 at 301.841 kb on + strand, within DZA65_RS01365 at 301.841 kb on + strand, within DZA65_RS01365 at 301.841 kb on + strand, within DZA65_RS01365 at 301.841 kb on + strand, within DZA65_RS01365 at 301.841 kb on + strand at 301.842 kb on - strand, within DZA65_RS01365 at 301.842 kb on - strand, within DZA65_RS01365 at 301.891 kb on + strand, within DZA65_RS01365 at 301.892 kb on - strand, within DZA65_RS01365 at 301.970 kb on + strand, within DZA65_RS01365 at 301.970 kb on + strand, within DZA65_RS01365 at 301.970 kb on + strand, within DZA65_RS01365 at 301.971 kb on - strand, within DZA65_RS01365 at 301.971 kb on - strand, within DZA65_RS01365 at 301.971 kb on - strand, within DZA65_RS01365 at 302.001 kb on - strand, within DZA65_RS01365 at 302.001 kb on - strand, within DZA65_RS01365 at 302.017 kb on - strand, within DZA65_RS01365 at 302.105 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.147 kb on + strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.148 kb on - strand, within DZA65_RS01365 at 302.151 kb on + strand, within DZA65_RS01365 at 302.207 kb on + strand at 302.208 kb on - strand at 302.249 kb on + strand at 302.249 kb on + strand at 302.249 kb on + strand at 302.272 kb on + strand at 302.272 kb on + strand at 302.273 kb on - strand at 302.273 kb on - strand at 302.279 kb on + strand at 302.279 kb on + strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.280 kb on - strand at 302.481 kb on + strand, within DZA65_RS01370 at 302.482 kb on - strand, within DZA65_RS01370 at 302.495 kb on + strand, within DZA65_RS01370 at 302.495 kb on + strand at 302.496 kb on - strand, within DZA65_RS01370 at 302.540 kb on - strand at 302.540 kb on - strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.574 kb on + strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.575 kb on - strand at 302.578 kb on + strand at 302.578 kb on + strand at 302.578 kb on + strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.579 kb on - strand at 302.622 kb on + strand at 302.622 kb on + strand at 302.623 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 301,455 + DZA65_RS01365 0.41 +0.2 301,468 + DZA65_RS01365 0.42 -0.4 301,700 + DZA65_RS01365 0.58 +1.1 301,701 - DZA65_RS01365 0.58 -1.2 301,701 - DZA65_RS01365 0.58 -0.6 301,701 - DZA65_RS01365 0.58 -0.3 301,701 - DZA65_RS01365 0.58 +0.3 301,701 - DZA65_RS01365 0.58 -1.5 301,701 - DZA65_RS01365 0.58 -0.4 301,704 + DZA65_RS01365 0.58 -1.1 301,704 + DZA65_RS01365 0.58 -0.3 301,704 + DZA65_RS01365 0.58 -1.4 301,705 - DZA65_RS01365 0.58 -0.9 301,753 + DZA65_RS01365 0.61 +0.6 301,799 + DZA65_RS01365 0.65 +0.5 301,812 + DZA65_RS01365 0.65 -0.5 301,839 + DZA65_RS01365 0.67 -1.4 301,840 - DZA65_RS01365 0.67 +0.2 301,840 - DZA65_RS01365 0.67 -0.1 301,840 - DZA65_RS01365 0.67 +0.6 301,840 - DZA65_RS01365 0.67 -0.3 301,840 - DZA65_RS01365 0.67 -0.2 301,841 + DZA65_RS01365 0.67 -0.1 301,841 + DZA65_RS01365 0.67 +0.3 301,841 + DZA65_RS01365 0.67 +1.0 301,841 + DZA65_RS01365 0.67 -0.7 301,841 + DZA65_RS01365 0.67 -0.4 301,841 + +2.0 301,842 - DZA65_RS01365 0.67 -1.1 301,842 - DZA65_RS01365 0.67 +0.1 301,891 + DZA65_RS01365 0.71 -0.9 301,892 - DZA65_RS01365 0.71 -0.5 301,970 + DZA65_RS01365 0.76 +1.2 301,970 + DZA65_RS01365 0.76 -0.4 301,970 + DZA65_RS01365 0.76 +0.0 301,971 - DZA65_RS01365 0.76 +0.1 301,971 - DZA65_RS01365 0.76 -0.3 301,971 - DZA65_RS01365 0.76 +0.2 302,001 - DZA65_RS01365 0.78 -1.1 302,001 - DZA65_RS01365 0.78 -0.6 302,017 - DZA65_RS01365 0.80 +0.9 302,105 + DZA65_RS01365 0.86 -1.0 302,147 + DZA65_RS01365 0.88 +0.3 302,147 + DZA65_RS01365 0.88 -0.1 302,147 + DZA65_RS01365 0.88 -2.6 302,147 + DZA65_RS01365 0.88 -0.7 302,147 + DZA65_RS01365 0.88 +1.9 302,147 + DZA65_RS01365 0.88 +0.6 302,147 + DZA65_RS01365 0.88 +0.8 302,147 + DZA65_RS01365 0.88 -0.4 302,147 + DZA65_RS01365 0.88 +0.8 302,147 + DZA65_RS01365 0.88 -0.9 302,147 + DZA65_RS01365 0.88 -0.1 302,147 + DZA65_RS01365 0.88 +0.5 302,147 + DZA65_RS01365 0.88 +0.8 302,147 + DZA65_RS01365 0.88 +0.3 302,147 + DZA65_RS01365 0.88 +1.3 302,147 + DZA65_RS01365 0.88 -1.0 302,148 - DZA65_RS01365 0.89 +0.0 302,148 - DZA65_RS01365 0.89 +0.2 302,148 - DZA65_RS01365 0.89 +0.4 302,148 - DZA65_RS01365 0.89 -0.7 302,148 - DZA65_RS01365 0.89 -0.4 302,148 - DZA65_RS01365 0.89 -1.9 302,148 - DZA65_RS01365 0.89 +1.6 302,148 - DZA65_RS01365 0.89 -1.0 302,148 - DZA65_RS01365 0.89 -0.4 302,148 - +2.0 302,148 - DZA65_RS01365 0.89 +0.0 302,148 - DZA65_RS01365 0.89 -0.3 302,148 - DZA65_RS01365 0.89 -1.2 302,148 - DZA65_RS01365 0.89 +0.0 302,148 - DZA65_RS01365 0.89 -1.0 302,148 - DZA65_RS01365 0.89 +0.1 302,148 - DZA65_RS01365 0.89 -0.5 302,148 - DZA65_RS01365 0.89 -0.3 302,148 - DZA65_RS01365 0.89 +0.6 302,148 - DZA65_RS01365 0.89 -0.7 302,148 - DZA65_RS01365 0.89 +0.4 302,148 - DZA65_RS01365 0.89 +0.0 302,148 - DZA65_RS01365 0.89 -0.6 302,148 - DZA65_RS01365 0.89 +1.6 302,148 - DZA65_RS01365 0.89 -1.6 302,148 - DZA65_RS01365 0.89 -1.1 302,151 + DZA65_RS01365 0.89 +0.2 302,207 + -0.1 302,208 - -0.4 302,249 + +0.6 302,249 + +0.3 302,249 + -0.1 302,272 + +0.7 302,272 + -3.2 302,273 - -0.5 302,273 - -0.6 302,279 + -0.4 302,279 + +0.1 302,280 - +0.2 302,280 - -2.0 302,280 - -0.4 302,280 - -0.6 302,280 - +0.6 302,280 - -0.1 302,280 - +0.1 302,280 - -0.0 302,481 + DZA65_RS01370 0.73 -1.9 302,482 - DZA65_RS01370 0.74 -0.3 302,495 + DZA65_RS01370 0.79 -1.4 302,495 + -0.7 302,496 - DZA65_RS01370 0.79 +0.0 302,540 - -1.0 302,540 - -1.7 302,574 + -0.9 302,574 + -0.6 302,574 + +0.7 302,574 + -1.4 302,574 + -0.1 302,574 + -0.1 302,574 + +0.1 302,574 + +0.1 302,574 + +1.0 302,575 - -1.3 302,575 - -0.2 302,575 - +0.4 302,575 - -0.7 302,575 - -0.8 302,575 - +0.8 302,575 - -0.3 302,575 - +0.0 302,578 + +0.9 302,578 + -1.7 302,578 + +1.6 302,579 - -0.0 302,579 - -0.7 302,579 - +0.8 302,579 - +1.2 302,579 - +0.6 302,579 - +1.6 302,579 - -0.2 302,622 + -1.6 302,622 + -0.4 302,623 - -0.6
Or see this region's nucleotide sequence