Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt DZA65_RS00805 and DZA65_RS00810 overlap by 4 nucleotides DZA65_RS00810 and DZA65_RS00815 are separated by 29 nucleotides
DZA65_RS00805: DZA65_RS00805 - glycosyltransferase family 4 protein, at 180,854 to 181,972
_RS00805
DZA65_RS00810: DZA65_RS00810 - putative lipopolysaccharide heptosyltransferase III, at 181,969 to 183,054
_RS00810
DZA65_RS00815: DZA65_RS00815 - lipopolysaccharide heptosyltransferase RfaC, at 183,084 to 184,064
_RS00815
Position (kb) 181
182
183
184 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 182.012 kb on - strand at 182.200 kb on - strand, within DZA65_RS00810 at 182.317 kb on - strand, within DZA65_RS00810 at 182.413 kb on - strand, within DZA65_RS00810 at 182.497 kb on + strand, within DZA65_RS00810 at 182.510 kb on - strand, within DZA65_RS00810 at 182.510 kb on - strand, within DZA65_RS00810 at 182.546 kb on - strand, within DZA65_RS00810 at 182.546 kb on - strand, within DZA65_RS00810 at 182.746 kb on - strand, within DZA65_RS00810 at 182.775 kb on - strand, within DZA65_RS00810 at 182.775 kb on - strand, within DZA65_RS00810 at 183.068 kb on + strand at 183.080 kb on - strand at 183.085 kb on + strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.086 kb on - strand at 183.094 kb on - strand at 183.094 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 182,012 - +0.2 182,200 - DZA65_RS00810 0.21 -0.2 182,317 - DZA65_RS00810 0.32 -2.1 182,413 - DZA65_RS00810 0.41 +1.1 182,497 + DZA65_RS00810 0.49 -0.7 182,510 - DZA65_RS00810 0.50 -0.2 182,510 - DZA65_RS00810 0.50 -0.1 182,546 - DZA65_RS00810 0.53 -2.4 182,546 - DZA65_RS00810 0.53 -0.7 182,746 - DZA65_RS00810 0.72 -2.9 182,775 - DZA65_RS00810 0.74 -0.8 182,775 - DZA65_RS00810 0.74 +0.2 183,068 + +0.6 183,080 - +0.6 183,085 + +0.4 183,086 - -1.9 183,086 - -1.8 183,086 - +1.1 183,086 - -0.4 183,086 - +0.3 183,086 - -0.1 183,086 - +2.0 183,086 - -1.2 183,094 - -0.2 183,094 - +0.4
Or see this region's nucleotide sequence