Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS00505

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
118,971	-				-0.1
118,971	-				-0.2
118,993	+				-0.7
119,001	-				+0.7
119,283	-		DZA65_RS00500	0.32	+0.1
119,317	+		DZA65_RS00500	0.36	+1.3
119,317	+		DZA65_RS00500	0.36	-0.5
119,317	+		DZA65_RS00500	0.36	-0.8
119,318	-		DZA65_RS00500	0.36	+0.4
119,318	-		DZA65_RS00500	0.36	-0.4
119,318	-		DZA65_RS00500	0.36	+0.5
119,318	-		DZA65_RS00500	0.36	-1.7
119,328	+		DZA65_RS00500	0.37	+0.2
119,328	+		DZA65_RS00500	0.37	-1.3
119,328	+		DZA65_RS00500	0.37	+0.7
119,328	+		DZA65_RS00500	0.37	-0.6
119,329	-		DZA65_RS00500	0.37	-0.1
119,329	-		DZA65_RS00500	0.37	+0.9
119,423	-		DZA65_RS00500	0.47	-1.7
119,430	+		DZA65_RS00500	0.48	+0.7
119,430	+		DZA65_RS00500	0.48	+0.3
119,430	+		DZA65_RS00500	0.48	+0.8
119,430	+		DZA65_RS00500	0.48	+0.3
119,430	+		DZA65_RS00500	0.48	-1.5
119,430	+		DZA65_RS00500	0.48	+0.9
119,431	-		DZA65_RS00500	0.48	-0.7
119,431	-		DZA65_RS00500	0.48	+0.2
119,431	-		DZA65_RS00500	0.48	-0.8
119,431	-		DZA65_RS00500	0.48	-0.1
119,489	-		DZA65_RS00500	0.54	+0.1
119,489	-		DZA65_RS00500	0.54	+0.5
119,489	-		DZA65_RS00500	0.54	-1.6
119,489	-		DZA65_RS00500	0.54	-1.0
119,503	+		DZA65_RS00500	0.56	+0.7
119,503	+		DZA65_RS00500	0.56	+2.2
119,504	-		DZA65_RS00500	0.56	-1.7
119,504	-		DZA65_RS00500	0.56	+0.5
119,714	+		DZA65_RS00500	0.79	+0.1
119,714	+		DZA65_RS00500	0.79	-0.4
119,714	+		DZA65_RS00500	0.79	-0.8
119,715	-		DZA65_RS00500	0.79	-0.8
119,800	+		DZA65_RS00500	0.88	+0.1
119,800	+		DZA65_RS00500	0.88	+0.5
119,801	-		DZA65_RS00500	0.88	-0.9
119,801	-		DZA65_RS00500	0.88	+0.1
119,801	-		DZA65_RS00500	0.88	+1.2
119,839	-				-0.9
119,839	-				-1.3
119,874	+				-1.2
119,894	+				+1.7
119,894	+				-0.3
120,101	+		DZA65_RS00505	0.15	-0.6
120,102	-		DZA65_RS00505	0.15	-0.1
120,169	-		DZA65_RS00505	0.20	+0.2
120,169	-		DZA65_RS00505	0.20	-1.1
120,357	+		DZA65_RS00505	0.34	-0.7
120,358	-		DZA65_RS00505	0.34	-0.2
120,474	+		DZA65_RS00505	0.42	-0.5
120,518	+		DZA65_RS00505	0.46	+1.2
120,518	+		DZA65_RS00505	0.46	+0.2
120,518	+		DZA65_RS00505	0.46	+1.7
120,518	+		DZA65_RS00505	0.46	-0.3
120,519	-		DZA65_RS00505	0.46	-0.8
120,519	-		DZA65_RS00505	0.46	-0.1
120,529	+		DZA65_RS00505	0.47	-0.1
120,530	-		DZA65_RS00505	0.47	-0.4
120,530	-		DZA65_RS00505	0.47	-0.1
120,537	-		DZA65_RS00505	0.47	+1.0
120,542	+		DZA65_RS00505	0.48	-1.1
120,560	-		DZA65_RS00505	0.49	-0.1
120,560	-		DZA65_RS00505	0.49	-1.8
120,562	+		DZA65_RS00505	0.49	+1.7
120,562	+		DZA65_RS00505	0.49	-1.0
120,562	+		DZA65_RS00505	0.49	-0.7
120,562	+		DZA65_RS00505	0.49	-1.1
120,563	-		DZA65_RS00505	0.49	-0.8
120,563	-		DZA65_RS00505	0.49	+0.9
120,569	-		DZA65_RS00505	0.50	+0.1
120,612	+		DZA65_RS00505	0.53	+1.1
120,612	+		DZA65_RS00505	0.53	+0.3
120,613	-		DZA65_RS00505	0.53	-0.4
120,613	-		DZA65_RS00505	0.53	-1.2
120,613	-		DZA65_RS00505	0.53	+0.2
120,616	+		DZA65_RS00505	0.53	-0.2
120,616	+		DZA65_RS00505	0.53	-1.1
120,616	+		DZA65_RS00505	0.53	+0.2
120,616	+		DZA65_RS00505	0.53	+0.3
120,616	+		DZA65_RS00505	0.53	-0.1
120,617	-		DZA65_RS00505	0.53	-0.3
120,617	-		DZA65_RS00505	0.53	+0.3
120,679	+		DZA65_RS00505	0.58	+0.3
120,903	+		DZA65_RS00505	0.74	-0.3
120,903	+		DZA65_RS00505	0.74	+0.1
120,903	+		DZA65_RS00505	0.74	+1.0
120,903	+		DZA65_RS00505	0.74	-1.1
120,903	+		DZA65_RS00505	0.74	-2.0
120,903	+				-0.1
120,903	+		DZA65_RS00505	0.74	-2.7
120,903	+		DZA65_RS00505	0.74	+0.4
120,904	-		DZA65_RS00505	0.74	-0.1
120,904	-		DZA65_RS00505	0.74	+0.9
120,904	-		DZA65_RS00505	0.74	+1.0
120,904	-		DZA65_RS00505	0.74	-0.4
120,904	-		DZA65_RS00505	0.74	+0.2
120,904	-		DZA65_RS00505	0.74	+0.5
120,904	-		DZA65_RS00505	0.74	+0.2
120,996	-		DZA65_RS00505	0.81	+1.1
121,015	+		DZA65_RS00505	0.83	-0.7
121,015	+		DZA65_RS00505	0.83	+0.7
121,016	-		DZA65_RS00505	0.83	+0.0
121,016	-		DZA65_RS00505	0.83	+1.7
121,016	-		DZA65_RS00505	0.83	-0.8
121,035	+		DZA65_RS00505	0.84	-1.0
121,035	+		DZA65_RS00505	0.84	-1.0
121,036	-		DZA65_RS00505	0.84	-0.2
121,036	-		DZA65_RS00505	0.84	-0.2
121,038	+		DZA65_RS00505	0.84	+0.8
121,038	+		DZA65_RS00505	0.84	-1.2
121,038	+		DZA65_RS00505	0.84	+0.5
121,038	+		DZA65_RS00505	0.84	+0.0
121,039	-		DZA65_RS00505	0.85	+0.0
121,039	-		DZA65_RS00505	0.85	-0.4
121,039	-		DZA65_RS00505	0.85	+1.2
121,039	-		DZA65_RS00505	0.85	-0.0
121,039	-		DZA65_RS00505	0.85	+0.9
121,107	+		DZA65_RS00505	0.90	-0.3
121,107	+		DZA65_RS00505	0.90	+2.0
121,108	-		DZA65_RS00505	0.90	-0.1
121,108	-		DZA65_RS00505	0.90	+0.2
121,113	+				+0.5
121,113	+				-1.7
121,113	+				-1.3
121,114	-				+0.1
121,114	-				+1.1
121,114	-				+0.0
121,114	-				+0.1
121,114	-				+0.2
121,114	-				+0.1
121,114	-				-1.1
121,114	-				+1.1
121,114	-				+0.7
121,114	-				-0.6
121,114	-				-0.7
121,114	-				-0.1
121,114	-				+0.9
121,114	-				+0.4
121,114	-				-0.9
121,114	-				+0.7
121,114	-				-0.2
121,123	+				+0.7
121,163	+				+0.6
121,163	+				+1.3
121,163	+				+0.2
121,163	+				+1.2
121,163	+				+0.1
121,163	+				-0.1
121,163	+				-0.2
121,163	+				-0.0
121,163	+				-0.1
121,163	+				+0.2
121,163	+				-0.5
121,163	+				-0.5
121,163	+				-0.9
121,163	+				+1.4
121,164	-				-0.1
121,164	-				-0.2
121,164	-				-0.2
121,164	-				-0.3
121,164	-				-1.4
121,164	-				-0.3
121,164	-				-0.3
121,164	-				+1.7
121,164	-				-1.1
121,164	-				-0.0
121,164	-				-1.1
121,164	-				-0.1
121,164	-				+0.7
121,168	-				-1.1
121,168	-				-0.5
121,168	-				-0.6
121,181	+				-0.9
121,181	+				+0.2
121,181	+				+0.7
121,181	+				-1.9
121,181	+				+0.3
121,181	+				-0.2
121,182	-				+0.9
121,182	-				-0.6
121,182	-				+0.9
121,182	-				-0.2
121,182	-				-0.6
121,182	-				-1.0
121,182	-				-0.5
121,182	-				+0.4
121,182	-				-0.3
121,183	+				+0.3
121,183	+				+2.0
121,183	+				+0.1
121,183	+				-0.3
121,183	+				+1.0
121,183	+				+0.2
121,183	+				-0.6
121,183	+				+0.7
121,183	+				+0.3
121,183	+				+0.1
121,183	+				+0.2
121,184	-				-1.2
121,184	-				+0.3
121,184	-				+1.1
121,184	-				+0.3
121,184	-				-1.1
121,184	-				-0.4
121,184	-				-0.3
121,184	-				+0.1
121,185	+				+0.1
121,185	+				-0.4
121,185	+				-0.6
121,185	+				-0.1
121,185	+				-1.1
121,185	+				-1.7
121,186	-				-0.5
121,186	-				+0.2
121,186	-				-0.9
121,348	+				+2.1
121,349	-		DZA65_RS00510	0.36	+1.1
121,349	-		DZA65_RS00510	0.36	-0.5
121,349	-		DZA65_RS00510	0.36	-0.1
121,394	+		DZA65_RS00510	0.50	+0.1
121,407	+		DZA65_RS00510	0.54	-0.9
121,466	+		DZA65_RS00510	0.73	-0.8
121,466	+		DZA65_RS00510	0.73	-1.5
121,467	-				+1.7
121,467	-		DZA65_RS00510	0.74	-0.3
121,467	-		DZA65_RS00510	0.74	-0.3
121,467	-		DZA65_RS00510	0.74	+0.2
121,467	-		DZA65_RS00510	0.74	-0.8
121,505	+		DZA65_RS00510	0.86	+1.7
121,505	+		DZA65_RS00510	0.86	-0.3
121,506	-		DZA65_RS00510	0.86	-0.1
121,507	+		DZA65_RS00510	0.87	-0.5
121,507	+		DZA65_RS00510	0.87	+1.4
121,507	+		DZA65_RS00510	0.87	+1.4
121,507	+		DZA65_RS00510	0.87	-0.5
121,507	+		DZA65_RS00510	0.87	-0.2
121,507	+		DZA65_RS00510	0.87	-0.0
121,507	+		DZA65_RS00510	0.87	-0.3
121,507	+		DZA65_RS00510	0.87	-0.3
121,507	+				-0.3
121,507	+		DZA65_RS00510	0.87	+0.0
121,507	+		DZA65_RS00510	0.87	-1.7
121,508	-		DZA65_RS00510	0.87	+0.4
121,508	-		DZA65_RS00510	0.87	-0.5
121,508	-		DZA65_RS00510	0.87	+0.4
121,508	-		DZA65_RS00510	0.87	+1.3
121,508	-		DZA65_RS00510	0.87	-0.1
121,508	-		DZA65_RS00510	0.87	-0.5
121,508	-		DZA65_RS00510	0.87	-0.9
121,508	-		DZA65_RS00510	0.87	-1.0
121,508	-		DZA65_RS00510	0.87	-0.1
121,508	-		DZA65_RS00510	0.87	-1.5
121,508	-		DZA65_RS00510	0.87	-1.3
121,508	-		DZA65_RS00510	0.87	-2.5
121,508	-		DZA65_RS00510	0.87	+1.1
121,508	-		DZA65_RS00510	0.87	+0.4
121,529	+				-1.1
121,529	+				+2.7
121,529	+				+1.7
121,529	+				-0.3
121,529	+				-0.1
121,530	-				+0.4
121,540	+				-0.8
121,551	-				-0.1
121,551	-				+1.6
121,559	+				+0.7
121,559	+				-0.3
121,559	+				+1.1
121,560	-				-1.0
121,580	+				-0.3
121,580	+				+0.3
121,581	-				+1.0
121,581	-				+0.5
121,581	-				+0.7
121,581	-				-0.1
121,583	-				+0.5
121,583	-				-1.1
121,643	+				-0.9
121,643	+				-0.4
121,644	-				-0.8
121,661	-				+0.1
121,669	+				+0.9
121,671	+				-0.5
121,671	+				+0.2
121,671	+				-0.1
121,671	+				-0.9
121,671	+				+0.6
121,672	-				-0.2
121,672	-				+0.5
121,672	-				-0.8
121,676	+				-1.7
121,677	-				+0.2
121,684	+				+0.1
121,684	+				-1.9
121,688	+				-0.1
121,688	+				-0.7
121,688	+				-1.9
121,688	+				-0.6
121,688	+				+0.7
121,688	+				+0.4
121,688	+				-1.0
121,688	+				+0.7
121,694	-				-1.1
121,704	+				+0.2
121,704	+				-1.5
121,704	+				+0.1
121,704	+				+1.5
121,704	+				-1.7
121,704	+				-0.5
121,705	-				+1.9
121,705	-				-0.3
121,705	-				-0.2
121,705	-				-0.5
121,705	-				+0.7
121,705	-				+0.0
121,705	-				+0.0
121,705	-				+0.1
121,705	-				+0.6
121,705	-				+0.7
121,708	+				+0.3
121,708	+				-1.1
121,708	+				+0.6
121,708	+				-0.5
121,708	+				-0.0
121,708	+				-0.6
121,709	-				-0.3
121,749	-				-0.1
121,749	-				+0.2
121,773	+				+0.7
121,774	-				-0.9
121,775	+				+0.9
121,776	-				+0.1
121,776	-				-0.3
121,786	-				-0.3
121,808	+				+0.2
121,808	+				+1.0
121,808	+				-0.6
121,808	+				+1.2
121,808	+				-0.4
121,809	-				+0.1
121,809	-				-0.7
121,809	-				+0.8
121,809	-				+1.2
121,809	-				-0.5
121,825	+				-1.7
121,825	+				+0.3
121,826	-				+0.5
121,826	-				-0.7
121,860	-				+0.5
121,860	-				-1.1
121,933	+				+0.7
121,934	-				-0.8
121,934	-				-0.3
121,934	-				-0.8
121,934	-				-1.1
121,934	-				-0.1
121,935	+				-1.0
121,935	+				-0.3
121,936	-				+1.0
121,936	-				+0.7
121,936	-				-0.5
121,936	-				+1.7
121,936	-				+1.7
121,941	+				+0.4
121,941	+				+0.3
121,941	+				+0.6
121,941	+				-0.9
121,941	+				+1.4
121,941	+				-0.3
121,941	+				+1.2
121,941	+				+0.3
121,941	+				+1.0
121,941	+				+0.1
121,942	-				+1.7
121,942	-				-0.3
121,942	-				+0.1
121,942	-				-0.2
121,942	-				-0.6
121,942	-				+0.6
121,942	-				-0.3
121,942	-				+0.1
121,942	-				+0.6
121,943	+				-0.8
121,943	+				+0.3
121,943	+				-0.1
121,943	+				-2.0
121,943	+				+0.3
121,943	+				-0.1
121,943	+				-1.5
121,943	+				-0.0
121,943	+				+0.2
121,943	+				-1.6
121,943	+				-0.3
121,943	+				-0.9
121,943	+				+0.1
121,943	+				+1.0
121,944	-				+0.8
121,944	-				-0.9
121,944	-				-0.3
121,944	-				+0.0
121,944	-				+0.2
121,944	-				+0.2
121,944	-				-1.0
121,944	-				+0.1
121,944	-				-0.1
121,945	+				+0.5
121,945	+				+0.9
121,945	+				-1.2
121,945	+				-1.1
121,946	-				+0.4
121,946	-				+0.2
121,966	+				+1.4
121,966	+				-0.6
121,966	+				+0.1
121,972	+				+0.2
121,972	+				-1.3
121,973	-				-1.2
121,973	-				+0.3
121,973	-				-0.3
121,973	-				+1.1
121,973	-				+0.1
121,973	-				+0.9
122,055	+				-0.6
122,082	+				+0.4
122,093	+				+0.0
122,099	+				-1.1
122,107	+				-0.8
122,108	-				+0.3
122,108	-				-0.7
122,111	+				-0.0
122,114	+				-0.4
122,114	+				-0.3
122,240	-				-0.8
122,245	+				-0.5