Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS19480

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,214,531	-		DZA65_RS19475	0.45	+0.9
4,214,568	+		DZA65_RS19475	0.48	+0.5
4,214,572	-		DZA65_RS19475	0.48	-0.5
4,214,605	+		DZA65_RS19475	0.50	-0.1
4,214,732	-		DZA65_RS19475	0.60	+0.8
4,214,732	-		DZA65_RS19475	0.60	-0.8
4,214,732	-		DZA65_RS19475	0.60	+0.0
4,214,865	-		DZA65_RS19475	0.71	-1.8
4,215,017	-		DZA65_RS19475	0.82	+0.3
4,215,027	+		DZA65_RS19475	0.83	-0.5
4,215,027	+		DZA65_RS19475	0.83	+0.6
4,215,027	+		DZA65_RS19475	0.83	-0.6
4,215,027	+		DZA65_RS19475	0.83	-0.7
4,215,027	+		DZA65_RS19475	0.83	+0.4
4,215,028	-		DZA65_RS19475	0.83	-0.4
4,215,028	-		DZA65_RS19475	0.83	-0.1
4,215,028	-		DZA65_RS19475	0.83	-1.8
4,215,028	-		DZA65_RS19475	0.83	-0.2
4,215,028	-		DZA65_RS19475	0.83	-0.7
4,215,028	-		DZA65_RS19475	0.83	+0.0
4,215,028	-		DZA65_RS19475	0.83	-1.5
4,215,234	+				+0.2
4,215,234	+				-0.5
4,215,234	+				+0.6
4,215,235	-				-0.2
4,215,235	-				-1.4
4,215,235	-				+1.2
4,215,289	+				+1.4
4,215,289	+				-0.8
4,215,289	+				+0.4
4,215,290	-				+0.4
4,215,290	-				-1.5
4,215,290	-				-0.7
4,215,318	+				-0.4
4,215,319	-				-0.3
4,215,595	-		DZA65_RS19480	0.37	-0.7
4,215,759	+		DZA65_RS19480	0.55	-0.6
4,215,759	+		DZA65_RS19480	0.55	-0.3
4,215,760	-		DZA65_RS19480	0.55	-1.0
4,216,164	+				-0.6
4,216,164	+				-0.4
4,216,164	+				-0.7
4,216,164	+				+0.4
4,216,164	+				+0.9
4,216,165	-				-0.6
4,216,207	-				-0.1
4,216,240	+				+0.9
4,216,240	+				-0.6
4,216,241	-				+1.2
4,216,289	+				-0.6
4,216,289	+				+1.0
4,216,290	-				+0.4
4,216,290	-				-0.1
4,216,292	+				-0.0
4,216,335	+				-0.7
4,216,336	-				+0.0
4,216,336	-				-0.5
4,216,336	-				+0.1
4,216,383	+				+0.0
4,216,383	+				+1.2
4,216,384	-				+0.5
4,216,406	+				-1.4
4,216,406	+				-1.4
4,216,419	+				-0.8
4,216,420	-				-0.8
4,216,511	+		DZA65_RS19485	0.13	-1.0
4,216,511	+		DZA65_RS19485	0.13	+0.1
4,216,562	+		DZA65_RS19485	0.16	+0.5
4,216,562	+		DZA65_RS19485	0.16	-0.4
4,216,711	-		DZA65_RS19485	0.22	-1.1
4,216,734	+		DZA65_RS19485	0.23	+0.0
4,216,734	+		DZA65_RS19485	0.23	-0.0
4,216,734	+		DZA65_RS19485	0.23	-0.6
4,216,735	-		DZA65_RS19485	0.23	+0.3
4,216,823	+		DZA65_RS19485	0.26	-1.2
4,216,823	+		DZA65_RS19485	0.26	-1.1
4,216,823	+		DZA65_RS19485	0.26	-0.8
4,216,823	+		DZA65_RS19485	0.26	+0.9
4,216,824	-		DZA65_RS19485	0.26	-0.1
4,216,833	+		DZA65_RS19485	0.27	+0.0
4,216,833	+		DZA65_RS19485	0.27	-0.4
4,216,833	+		DZA65_RS19485	0.27	+0.7
4,216,833	+		DZA65_RS19485	0.27	-0.6
4,216,834	-		DZA65_RS19485	0.27	-0.6
4,216,871	+		DZA65_RS19485	0.28	-0.0
4,216,871	+		DZA65_RS19485	0.28	-0.8
4,216,874	+				+1.5
4,216,874	+		DZA65_RS19485	0.28	+0.1
4,216,874	+		DZA65_RS19485	0.28	-1.6
4,216,874	+		DZA65_RS19485	0.28	-0.6
4,216,874	+		DZA65_RS19485	0.28	-0.1
4,216,874	+		DZA65_RS19485	0.28	-1.1
4,216,875	-		DZA65_RS19485	0.28	-0.2
4,216,875	-		DZA65_RS19485	0.28	-0.7
4,216,946	+		DZA65_RS19485	0.31	-0.1
4,216,947	-		DZA65_RS19485	0.31	-0.9
4,216,974	+		DZA65_RS19485	0.32	-0.9
4,216,974	+		DZA65_RS19485	0.32	-0.5
4,216,974	+		DZA65_RS19485	0.32	-0.6
4,216,974	+		DZA65_RS19485	0.32	+0.3
4,216,975	-		DZA65_RS19485	0.32	+0.1
4,217,006	+		DZA65_RS19485	0.34	-0.1
4,217,006	+		DZA65_RS19485	0.34	-1.2
4,217,006	+		DZA65_RS19485	0.34	+0.2
4,217,007	-		DZA65_RS19485	0.34	-0.8
4,217,007	-		DZA65_RS19485	0.34	-1.0
4,217,085	+		DZA65_RS19485	0.37	-1.6
4,217,086	-		DZA65_RS19485	0.37	-0.1
4,217,086	-		DZA65_RS19485	0.37	-0.1
4,217,086	-		DZA65_RS19485	0.37	+1.0
4,217,098	+		DZA65_RS19485	0.37	+0.4
4,217,098	+		DZA65_RS19485	0.37	-0.4
4,217,098	+		DZA65_RS19485	0.37	-0.8
4,217,098	+		DZA65_RS19485	0.37	-2.1
4,217,098	+		DZA65_RS19485	0.37	+0.8
4,217,098	+		DZA65_RS19485	0.37	-0.0
4,217,098	+		DZA65_RS19485	0.37	-0.3
4,217,099	-		DZA65_RS19485	0.37	-1.1
4,217,099	-		DZA65_RS19485	0.37	-0.6
4,217,099	-		DZA65_RS19485	0.37	+0.3
4,217,099	-		DZA65_RS19485	0.37	-0.5
4,217,143	+		DZA65_RS19485	0.39	-0.1
4,217,144	-		DZA65_RS19485	0.39	-0.2
4,217,144	-		DZA65_RS19485	0.39	+0.5
4,217,144	-		DZA65_RS19485	0.39	-0.6
4,217,144	-		DZA65_RS19485	0.39	+0.5