Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,939,845	+				-0.8
3,939,845	+				-0.0
3,939,845	+				-0.0
3,939,845	+				+0.0
3,939,848	+				-0.2
3,939,867	+				-0.3
3,939,867	+				-0.5
3,939,868	-				+0.5
3,939,897	+				-0.7
3,940,118	-		DZA65_RS18270	0.34	-0.2
3,940,142	-		DZA65_RS18270	0.38	-0.7
3,940,179	+		DZA65_RS18270	0.44	-1.2
3,940,179	+		DZA65_RS18270	0.44	-0.8
3,940,179	+		DZA65_RS18270	0.44	+1.5
3,940,179	+		DZA65_RS18270	0.44	+0.2
3,940,184	-		DZA65_RS18270	0.45	+1.3
3,940,213	-		DZA65_RS18270	0.49	-0.4
3,940,249	-		DZA65_RS18270	0.55	-0.3
3,940,312	+				+3.2
3,940,357	+		DZA65_RS18270	0.71	+1.2
3,940,357	+		DZA65_RS18270	0.71	-0.8
3,940,434	+		DZA65_RS18270	0.83	+0.7
3,940,435	-		DZA65_RS18270	0.84	-0.8
3,940,437	+				+0.6
3,940,438	-		DZA65_RS18270	0.84	+0.7
3,940,438	-		DZA65_RS18270	0.84	+0.3
3,940,438	-		DZA65_RS18270	0.84	-1.2
3,940,732	+				+0.5
3,940,733	-				-2.4
3,940,786	+		DZA65_RS18275	0.11	-0.8
3,940,786	+		DZA65_RS18275	0.11	-1.8
3,940,786	+		DZA65_RS18275	0.11	+0.4
3,940,787	-		DZA65_RS18275	0.11	-0.4
3,940,787	-		DZA65_RS18275	0.11	-0.8
3,940,787	-		DZA65_RS18275	0.11	+0.8
3,940,787	-		DZA65_RS18275	0.11	-0.3
3,940,992	+		DZA65_RS18275	0.24	-0.1
3,940,993	-		DZA65_RS18275	0.24	-0.8
3,941,076	+		DZA65_RS18275	0.29	-2.7
3,941,076	+		DZA65_RS18275	0.29	+0.6
3,941,115	+		DZA65_RS18275	0.31	-0.8
3,941,157	+		DZA65_RS18275	0.34	+0.5
3,941,225	+		DZA65_RS18275	0.38	-0.5
3,941,225	+		DZA65_RS18275	0.38	+0.1
3,941,225	+		DZA65_RS18275	0.38	-1.0
3,941,225	+		DZA65_RS18275	0.38	-1.8
3,941,226	-		DZA65_RS18275	0.38	+0.2
3,941,226	-		DZA65_RS18275	0.38	-1.1
3,941,226	-		DZA65_RS18275	0.38	-1.8
3,941,226	-		DZA65_RS18275	0.38	-0.1
3,941,226	-		DZA65_RS18275	0.38	-0.7
3,941,323	-		DZA65_RS18275	0.44	-0.6
3,941,484	+		DZA65_RS18275	0.55	+0.4
3,941,485	-		DZA65_RS18275	0.55	-1.8
3,941,527	+		DZA65_RS18275	0.57	+0.3
3,941,594	-		DZA65_RS18275	0.61	-2.4
3,941,613	+		DZA65_RS18275	0.63	-0.8
3,941,634	+		DZA65_RS18275	0.64	-2.0
3,941,635	-		DZA65_RS18275	0.64	+1.2
3,941,635	-		DZA65_RS18275	0.64	+0.4
3,941,635	-		DZA65_RS18275	0.64	-0.0
3,941,636	+		DZA65_RS18275	0.64	+0.2
3,941,636	+		DZA65_RS18275	0.64	-0.2
3,941,759	+		DZA65_RS18275	0.72	+0.9
3,941,759	+		DZA65_RS18275	0.72	+0.2
3,941,759	+		DZA65_RS18275	0.72	+0.3
3,941,759	+		DZA65_RS18275	0.72	-0.5
3,941,760	-		DZA65_RS18275	0.72	-0.4
3,941,762	+		DZA65_RS18275	0.72	+0.3
3,941,762	+		DZA65_RS18275	0.72	+0.8
3,941,762	+		DZA65_RS18275	0.72	-0.3
3,941,762	+		DZA65_RS18275	0.72	+0.7
3,941,763	-		DZA65_RS18275	0.72	+2.2
3,941,763	-		DZA65_RS18275	0.72	-0.2
3,941,763	-		DZA65_RS18275	0.72	-0.0
3,941,763	-		DZA65_RS18275	0.72	-0.1
3,941,763	-		DZA65_RS18275	0.72	-3.0
3,941,763	-		DZA65_RS18275	0.72	-1.1
3,941,785	+		DZA65_RS18275	0.74	-1.2
3,941,823	-		DZA65_RS18275	0.76	+0.5
3,941,831	+		DZA65_RS18275	0.76	-0.2
3,941,844	+		DZA65_RS18275	0.77	-1.8
3,941,844	+		DZA65_RS18275	0.77	-0.9
3,941,845	-		DZA65_RS18275	0.77	-0.7
3,941,845	-		DZA65_RS18275	0.77	-0.6
3,941,845	-		DZA65_RS18275	0.77	-0.3
3,941,845	-		DZA65_RS18275	0.77	+0.5
3,941,871	+		DZA65_RS18275	0.79	-0.1
3,941,871	+		DZA65_RS18275	0.79	-2.9
3,941,871	+		DZA65_RS18275	0.79	+0.8
3,941,872	-		DZA65_RS18275	0.79	-1.1
3,941,872	-		DZA65_RS18275	0.79	+0.0
3,941,872	-		DZA65_RS18275	0.79	-1.2
3,941,876	-		DZA65_RS18275	0.79	-0.7
3,941,885	+		DZA65_RS18275	0.80	-0.8
3,941,917	+		DZA65_RS18275	0.82	+0.2
3,941,927	+		DZA65_RS18275	0.82	-1.8
3,941,927	+		DZA65_RS18275	0.82	+0.7
3,941,927	+		DZA65_RS18275	0.82	-0.5
3,941,927	+		DZA65_RS18275	0.82	-0.8
3,941,928	-		DZA65_RS18275	0.83	-0.1
3,941,928	-		DZA65_RS18275	0.83	+0.6
3,941,928	-		DZA65_RS18275	0.83	-0.7
3,941,928	-		DZA65_RS18275	0.83	-0.4
3,941,981	+		DZA65_RS18275	0.86	+0.2
3,941,981	+		DZA65_RS18275	0.86	-0.2
3,941,982	-		DZA65_RS18275	0.86	+0.3
3,941,982	-		DZA65_RS18275	0.86	+0.2
3,941,982	-		DZA65_RS18275	0.86	-0.4
3,942,024	+		DZA65_RS18275	0.89	+0.8
3,942,024	+		DZA65_RS18275	0.89	-0.7
3,942,024	+		DZA65_RS18275	0.89	-0.7
3,942,030	+		DZA65_RS18275	0.89	+0.2
3,942,030	+		DZA65_RS18275	0.89	-0.0
3,942,031	-		DZA65_RS18275	0.89	-0.2
3,942,031	-		DZA65_RS18275	0.89	-0.8
3,942,032	+		DZA65_RS18275	0.89	+1.5
3,942,032	+		DZA65_RS18275	0.89	-1.8
3,942,032	+		DZA65_RS18275	0.89	-1.2
3,942,032	+		DZA65_RS18275	0.89	-1.1
3,942,033	-		DZA65_RS18275	0.89	-0.8
3,942,033	-		DZA65_RS18275	0.89	+0.5
3,942,033	-		DZA65_RS18275	0.89	+0.3
3,942,033	-		DZA65_RS18275	0.89	+0.6
3,942,033	-		DZA65_RS18275	0.89	-2.0
3,942,033	-		DZA65_RS18275	0.89	+1.2
3,942,033	-		DZA65_RS18275	0.89	+0.4
3,942,077	-				+0.2
3,942,156	+				-0.4
3,942,189	+				+1.2
3,942,189	+				+0.9
3,942,189	+				+0.2
3,942,189	+				-0.4
3,942,248	-				+1.7
3,942,248	-				+0.7
3,942,251	+				-0.3
3,942,251	+				-0.2
3,942,251	+				-0.9
3,942,251	+				+0.2
3,942,251	+				-0.3
3,942,251	+				-0.3
3,942,251	+				+0.3
3,942,252	-				-1.4
3,942,252	-				+0.8
3,942,252	-				+0.3
3,942,252	-				+0.1
3,942,252	-				+0.7
3,942,252	-				-0.1
3,942,252	-				-0.4
3,942,356	-				-0.9
3,942,356	-				+0.4
3,942,364	+				-0.1
3,942,365	-				+0.3
3,942,368	+				-0.9
3,942,392	+				-0.4
3,942,393	-				-1.0
3,942,422	-				-0.2
3,942,422	-				+0.1
3,942,422	-				-1.9
3,942,472	+				-1.3
3,943,047	+				-0.6
3,943,047	+				+0.6
3,943,048	-				-0.4
3,943,048	-				+2.0
3,943,048	-				+0.5
3,943,048	-				+0.5
3,943,048	-				+0.1
3,943,048	-				-2.1
3,943,054	-				+0.3
3,943,054	-				+0.3
3,943,194	+		DZA65_RS18285	0.20	+0.3
3,943,195	-		DZA65_RS18285	0.20	-0.3
3,943,200	+		DZA65_RS18285	0.22	-0.2
3,943,200	+		DZA65_RS18285	0.22	-0.2
3,943,200	+		DZA65_RS18285	0.22	-0.9
3,943,200	+		DZA65_RS18285	0.22	-0.2