Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS18035

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,880,008	-				-1.3
3,880,008	-				-0.3
3,880,008	-				-0.2
3,880,008	-				+0.0
3,880,008	-				-0.6
3,880,062	+				-0.4
3,880,063	-				-0.1
3,880,063	-				+1.1
3,880,072	-				-0.7
3,880,083	+				-0.7
3,880,084	-				-0.3
3,880,107	-				-0.9
3,880,111	+				+0.1
3,880,112	-				-1.9
3,880,112	-				-1.0
3,880,112	-				+2.0
3,880,112	-				-0.1
3,880,177	+				+0.9
3,880,184	-				+0.0
3,880,184	-				+0.4
3,880,184	-				+0.6
3,880,202	+				+0.6
3,880,202	+				+0.6
3,880,202	+				+0.1
3,880,203	-				+1.5
3,880,213	+				-0.5
3,880,213	+				+0.6
3,880,213	+				-1.0
3,880,214	-				-0.6
3,880,214	-				-0.2
3,880,214	-				+0.7
3,880,257	+				-0.7
3,880,319	-				-0.3
3,880,349	+		DZA65_RS18030	0.14	-0.9
3,880,350	-		DZA65_RS18030	0.15	+0.5
3,880,350	-				+1.1
3,880,371	-		DZA65_RS18030	0.18	+0.1
3,880,379	+		DZA65_RS18030	0.19	-0.2
3,880,379	+		DZA65_RS18030	0.19	+0.0
3,880,379	+		DZA65_RS18030	0.19	+0.1
3,880,379	+		DZA65_RS18030	0.19	+1.0
3,880,535	-		DZA65_RS18030	0.44	-1.2
3,880,535	-		DZA65_RS18030	0.44	-0.4
3,880,577	+		DZA65_RS18030	0.51	+1.0
3,880,613	-		DZA65_RS18030	0.56	+0.1
3,880,701	+		DZA65_RS18030	0.70	-0.4
3,880,701	+		DZA65_RS18030	0.70	+0.6
3,880,701	+		DZA65_RS18030	0.70	-1.2
3,880,701	+		DZA65_RS18030	0.70	+0.5
3,880,701	+		DZA65_RS18030	0.70	+0.6
3,880,701	+		DZA65_RS18030	0.70	+0.6
3,880,701	+		DZA65_RS18030	0.70	-1.2
3,880,702	-		DZA65_RS18030	0.71	-1.7
3,880,702	-		DZA65_RS18030	0.71	-0.2
3,880,747	+		DZA65_RS18030	0.78	+0.1
3,880,747	+		DZA65_RS18030	0.78	-0.4
3,880,747	+		DZA65_RS18030	0.78	+0.1
3,880,752	+		DZA65_RS18030	0.79	-0.9
3,880,752	+		DZA65_RS18030	0.79	+0.1
3,880,753	-		DZA65_RS18030	0.79	-0.6
3,880,759	+		DZA65_RS18030	0.80	-0.2
3,880,760	-		DZA65_RS18030	0.80	+0.4
3,880,760	-		DZA65_RS18030	0.80	+0.7
3,880,876	+				+0.7
3,880,876	+				-1.1
3,880,939	-				-0.2
3,880,962	-				-0.4
3,880,969	+				+0.3
3,881,006	-				-0.7
3,881,097	+				+1.3
3,881,098	-				-2.3
3,881,098	-				-0.8
3,881,098	-				-1.8
3,881,098	-				-0.9
3,881,098	-				+0.4
3,881,098	-				-0.1
3,881,416	+		DZA65_RS18035	0.39	-0.3
3,881,416	+		DZA65_RS18035	0.39	+0.8
3,881,416	+		DZA65_RS18035	0.39	-0.1
3,881,417	-		DZA65_RS18035	0.39	-0.5
3,881,417	-		DZA65_RS18035	0.39	-1.0
3,881,417	-		DZA65_RS18035	0.39	-1.4
3,881,452	-		DZA65_RS18035	0.42	-0.4
3,881,452	-		DZA65_RS18035	0.42	-0.4
3,881,452	-		DZA65_RS18035	0.42	-0.8
3,881,452	-		DZA65_RS18035	0.42	-0.4
3,881,476	+		DZA65_RS18035	0.45	-0.1
3,881,476	+		DZA65_RS18035	0.45	+0.6
3,881,476	+		DZA65_RS18035	0.45	-1.2
3,881,476	+		DZA65_RS18035	0.45	-1.3
3,881,477	-		DZA65_RS18035	0.45	-0.2
3,881,477	-		DZA65_RS18035	0.45	-0.7
3,881,581	+		DZA65_RS18035	0.55	+0.4
3,881,582	-		DZA65_RS18035	0.55	-0.3
3,881,582	-		DZA65_RS18035	0.55	+0.1
3,881,582	-		DZA65_RS18035	0.55	-0.4
3,881,582	-		DZA65_RS18035	0.55	+0.2
3,881,582	-		DZA65_RS18035	0.55	+0.4
3,881,663	+		DZA65_RS18035	0.62	-0.9
3,881,664	-		DZA65_RS18035	0.63	-1.3
3,881,664	-		DZA65_RS18035	0.63	-0.4
3,881,833	+		DZA65_RS18035	0.79	+0.6
3,881,833	+		DZA65_RS18035	0.79	-2.6
3,881,833	+		DZA65_RS18035	0.79	+0.1
3,881,833	+		DZA65_RS18035	0.79	-0.3
3,881,833	+		DZA65_RS18035	0.79	-0.9
3,881,833	+		DZA65_RS18035	0.79	-0.9
3,881,833	+		DZA65_RS18035	0.79	-0.9
3,881,833	+		DZA65_RS18035	0.79	-0.8
3,881,833	+		DZA65_RS18035	0.79	-1.8
3,881,834	-		DZA65_RS18035	0.79	-0.4
3,881,834	-		DZA65_RS18035	0.79	+0.1
3,881,834	-		DZA65_RS18035	0.79	+0.5
3,881,834	-		DZA65_RS18035	0.79	-1.7
3,881,834	-		DZA65_RS18035	0.79	-0.9
3,881,834	-		DZA65_RS18035	0.79	-1.6
3,881,834	-		DZA65_RS18035	0.79	+0.6
3,882,051	+				+0.6
3,882,051	+				+0.1
3,882,051	+				-1.4
3,882,051	+				-0.1
3,882,052	-				+0.1
3,882,052	-				-1.1
3,882,052	-				-1.4
3,882,052	-				-1.2
3,882,052	-				+0.7
3,882,052	-				+0.1
3,882,071	+				+1.5
3,882,596	+				+0.3
3,882,597	-				+0.5
3,882,597	-				+0.1
3,882,993	-		DZA65_RS18045	0.61	-0.7