Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS17025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,672,406	+				-0.7
3,672,406	+				+0.1
3,672,406	+				-1.2
3,672,407	-				+0.3
3,672,535	-				-0.4
3,672,546	-				+0.3
3,672,546	-				+1.6
3,672,661	+		DZA65_RS17015	0.37	+0.3
3,672,685	-		DZA65_RS17015	0.44	-1.1
3,672,688	+		DZA65_RS17015	0.45	-1.2
3,672,688	+		DZA65_RS17015	0.45	-2.5
3,672,798	+		DZA65_RS17015	0.80	+0.4
3,672,799	-		DZA65_RS17015	0.80	-1.2
3,672,807	+		DZA65_RS17015	0.83	+0.6
3,672,808	-		DZA65_RS17015	0.83	-0.6
3,672,808	-		DZA65_RS17015	0.83	+1.4
3,672,866	-				+0.5
3,672,891	+				-0.0
3,673,298	-				-0.9
3,673,302	-				+0.1
3,673,311	+				-0.4
3,673,312	-				-0.2
3,673,403	+				-0.8
3,673,408	-				-1.1
3,673,445	+				+0.0
3,673,457	-				-0.4
3,673,510	-		DZA65_RS17025	0.11	-0.8
3,673,510	-		DZA65_RS17025	0.11	-1.2
3,673,558	+		DZA65_RS17025	0.16	-0.3
3,673,558	+		DZA65_RS17025	0.16	-0.2
3,673,575	-		DZA65_RS17025	0.18	+0.8
3,673,575	-		DZA65_RS17025	0.18	+0.4
3,673,631	-		DZA65_RS17025	0.23	+0.2
3,673,632	+		DZA65_RS17025	0.23	+1.0
3,673,632	+		DZA65_RS17025	0.23	-0.4
3,673,673	+		DZA65_RS17025	0.28	+1.7
3,673,709	+		DZA65_RS17025	0.31	+0.3
3,673,710	-		DZA65_RS17025	0.32	+0.6
3,673,710	-		DZA65_RS17025	0.32	-0.2
3,673,710	-		DZA65_RS17025	0.32	+1.5
3,673,710	-		DZA65_RS17025	0.32	-0.2
3,673,710	-		DZA65_RS17025	0.32	+0.5
3,673,787	+		DZA65_RS17025	0.40	+1.5
3,673,804	-		DZA65_RS17025	0.41	+0.2
3,673,805	+		DZA65_RS17025	0.41	-0.1
3,673,805	+		DZA65_RS17025	0.41	+0.7
3,673,806	-		DZA65_RS17025	0.42	+0.2
3,673,806	-		DZA65_RS17025	0.42	-0.3
3,673,856	-		DZA65_RS17025	0.47	-0.1
3,673,856	-		DZA65_RS17025	0.47	+1.7
3,673,947	-		DZA65_RS17025	0.56	-0.7
3,674,062	-		DZA65_RS17025	0.68	-0.4
3,674,108	-		DZA65_RS17025	0.73	-1.2
3,674,138	-		DZA65_RS17025	0.76	+0.6
3,674,181	-		DZA65_RS17025	0.80	+1.7
3,674,188	+		DZA65_RS17025	0.81	-0.6
3,674,218	+		DZA65_RS17025	0.84	+0.7
3,674,221	-		DZA65_RS17025	0.85	-0.9
3,674,375	-				+0.1
3,674,427	+				+0.5
3,674,494	+				-2.2
3,674,495	-				+0.7
3,674,495	-				-2.4
3,674,495	-				+1.1
3,674,517	-				-0.3
3,674,527	+				+0.1
3,674,527	+				-0.4
3,674,527	+				-0.1
3,674,528	-				+0.5
3,674,528	-				-0.0
3,674,535	+				-0.7
3,674,536	-				-0.7
3,674,536	-				+0.4
3,674,570	+		DZA65_RS17030	0.12	-1.0
3,674,570	+		DZA65_RS17030	0.12	-0.7
3,674,571	-		DZA65_RS17030	0.12	+1.0
3,674,572	+		DZA65_RS17030	0.13	-0.4
3,674,572	+		DZA65_RS17030	0.13	+0.1
3,674,607	-		DZA65_RS17030	0.15	+0.2
3,674,607	-		DZA65_RS17030	0.15	-0.5
3,674,609	+		DZA65_RS17030	0.15	+0.7
3,674,609	+		DZA65_RS17030	0.15	-0.1
3,674,609	+		DZA65_RS17030	0.15	+0.0
3,674,610	-		DZA65_RS17030	0.15	-0.5
3,674,636	-		DZA65_RS17030	0.18	-0.7
3,674,636	-		DZA65_RS17030	0.18	+0.2
3,674,714	-		DZA65_RS17030	0.24	-0.9
3,674,834	+		DZA65_RS17030	0.33	+0.4
3,674,834	+		DZA65_RS17030	0.33	+0.4
3,674,881	-		DZA65_RS17030	0.37	-1.9
3,674,883	+		DZA65_RS17030	0.37	+0.6
3,674,955	-		DZA65_RS17030	0.42	+1.5
3,674,987	+		DZA65_RS17030	0.45	+0.1
3,674,987	+		DZA65_RS17030	0.45	+0.1
3,674,987	+		DZA65_RS17030	0.45	+0.2
3,674,987	+		DZA65_RS17030	0.45	+0.6
3,674,988	-		DZA65_RS17030	0.45	-1.1
3,674,988	-		DZA65_RS17030	0.45	-0.3
3,674,989	+		DZA65_RS17030	0.45	-0.5
3,674,990	-		DZA65_RS17030	0.45	-0.2
3,674,990	-		DZA65_RS17030	0.45	-0.5
3,674,990	-		DZA65_RS17030	0.45	-0.2
3,674,993	+		DZA65_RS17030	0.45	-0.2
3,675,056	-		DZA65_RS17030	0.50	-2.1
3,675,056	-		DZA65_RS17030	0.50	+0.3
3,675,062	+		DZA65_RS17030	0.51	+0.0
3,675,093	+		DZA65_RS17030	0.53	-0.9
3,675,093	+		DZA65_RS17030	0.53	-0.2
3,675,093	+		DZA65_RS17030	0.53	+0.6
3,675,093	+		DZA65_RS17030	0.53	-0.0
3,675,191	+		DZA65_RS17030	0.61	-0.4
3,675,191	+		DZA65_RS17030	0.61	+0.5
3,675,192	-		DZA65_RS17030	0.61	-0.4
3,675,194	+		DZA65_RS17030	0.61	+0.5
3,675,194	+		DZA65_RS17030	0.61	-0.6
3,675,233	+		DZA65_RS17030	0.64	-1.5
3,675,266	-		DZA65_RS17030	0.67	-0.6