Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15825

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,436,236	+		DZA65_RS15820	0.46	-0.0
3,436,297	-		DZA65_RS15820	0.50	-0.6
3,436,345	-		DZA65_RS15820	0.54	-0.2
3,436,370	+		DZA65_RS15820	0.55	+0.0
3,436,371	-		DZA65_RS15820	0.55	-0.3
3,436,479	-		DZA65_RS15820	0.63	-0.3
3,436,479	-		DZA65_RS15820	0.63	+0.3
3,436,490	+		DZA65_RS15820	0.64	+0.3
3,436,491	-		DZA65_RS15820	0.64	+1.3
3,436,500	+		DZA65_RS15820	0.64	-1.2
3,436,553	-		DZA65_RS15820	0.68	+0.2
3,436,553	-		DZA65_RS15820	0.68	+0.0
3,436,554	+		DZA65_RS15820	0.68	-0.4
3,436,557	+		DZA65_RS15820	0.69	-0.9
3,436,561	-		DZA65_RS15820	0.69	-1.4
3,436,653	+		DZA65_RS15820	0.75	+0.8
3,436,654	-		DZA65_RS15820	0.75	-0.6
3,436,663	-		DZA65_RS15820	0.76	+0.1
3,436,787	+		DZA65_RS15820	0.85	-0.2
3,436,788	-		DZA65_RS15820	0.85	-0.2
3,436,816	-		DZA65_RS15820	0.87	-0.6
3,436,818	+		DZA65_RS15820	0.87	+0.7
3,436,818	+		DZA65_RS15820	0.87	-1.8
3,436,818	+		DZA65_RS15820	0.87	-0.2
3,436,818	+		DZA65_RS15820	0.87	+0.2
3,436,819	-		DZA65_RS15820	0.87	+0.2
3,436,819	-		DZA65_RS15820	0.87	-0.6
3,436,819	-		DZA65_RS15820	0.87	+1.3
3,436,819	-		DZA65_RS15820	0.87	-0.4
3,436,819	-				+0.3
3,436,854	-		DZA65_RS15820	0.90	+0.4
3,436,854	-		DZA65_RS15820	0.90	-0.1
3,436,861	+				+2.2
3,436,861	+				-0.1
3,436,862	-				-0.2
3,436,862	-				+0.6
3,436,862	-				-0.8
3,436,862	-				-0.3
3,436,862	-				-0.4
3,436,862	-				-0.6
3,436,968	+				-0.3
3,436,969	-				-0.2
3,436,988	-				+0.7
3,437,041	+				+0.0
3,437,041	+				-0.8
3,437,041	+				+0.4
3,437,041	+				-0.2
3,437,041	+				+0.8
3,437,042	-				+0.1
3,437,042	-				-1.0
3,437,042	-				+1.3
3,437,042	-				-0.6
3,437,136	-				+1.1
3,437,164	+				-0.6
3,437,164	+				-0.2
3,437,190	+				-0.6
3,437,190	+				+0.2
3,437,190	+				-0.2
3,437,190	+				-0.6
3,437,190	+				-0.9
3,437,190	+				+0.3
3,437,190	+				-0.6
3,437,190	+				-0.2
3,437,191	-				-0.0
3,437,191	-				+0.4
3,437,191	-				+0.3
3,437,191	-				-0.4
3,437,191	-				-0.6
3,437,191	-				+1.0
3,437,191	-				-0.4
3,437,191	-				+0.4
3,437,191	-				-0.5
3,437,210	+				-0.1
3,437,210	+				-2.0
3,437,210	+				+1.3
3,437,210	+				-1.2
3,437,211	-				-0.2
3,437,211	-				+0.4
3,437,214	+				+0.2
3,437,214	+				+1.2
3,437,214	+				-0.4
3,437,214	+				-0.0
3,437,215	-				+1.0
3,437,215	-				-0.3
3,437,215	-				-1.3
3,437,215	-				-1.3
3,437,215	-				+0.5
3,437,215	-				-0.3
3,437,233	+				-0.6
3,437,233	+				-0.6
3,437,237	+				-0.5
3,437,237	+				+0.3
3,437,237	+				-0.7
3,437,237	+				+0.1
3,437,237	+				-0.3
3,437,237	+				-1.4
3,437,237	+				-0.1
3,437,238	-				+0.3
3,437,238	-				-1.2
3,437,238	-				-0.1
3,437,297	+				-0.9
3,437,297	+				+1.4
3,437,304	+		DZA65_RS15825	0.11	+0.0
3,437,305	-		DZA65_RS15825	0.11	+0.5
3,437,510	-		DZA65_RS15825	0.40	+1.2
3,437,555	+		DZA65_RS15825	0.46	-0.8
3,437,555	+		DZA65_RS15825	0.46	-0.2
3,437,555	+		DZA65_RS15825	0.46	+1.8
3,437,555	+		DZA65_RS15825	0.46	+0.2
3,437,556	-		DZA65_RS15825	0.47	-0.6
3,437,556	-		DZA65_RS15825	0.47	-1.0
3,437,631	+		DZA65_RS15825	0.57	-0.2
3,437,631	+		DZA65_RS15825	0.57	-1.1
3,437,631	+		DZA65_RS15825	0.57	+0.3
3,437,631	+		DZA65_RS15825	0.57	-0.2
3,437,631	+		DZA65_RS15825	0.57	-3.0
3,437,632	-		DZA65_RS15825	0.57	-0.3
3,437,632	-		DZA65_RS15825	0.57	-0.2
3,437,632	-		DZA65_RS15825	0.57	-0.6
3,437,682	+		DZA65_RS15825	0.64	+0.0
3,437,798	+		DZA65_RS15825	0.81	+1.4
3,437,798	+		DZA65_RS15825	0.81	+0.7
3,437,798	+		DZA65_RS15825	0.81	-1.0
3,437,798	+		DZA65_RS15825	0.81	+1.3
3,437,798	+		DZA65_RS15825	0.81	-1.7
3,437,798	+		DZA65_RS15825	0.81	+1.3
3,437,799	-		DZA65_RS15825	0.81	+0.5
3,437,799	-		DZA65_RS15825	0.81	+0.4
3,437,799	-		DZA65_RS15825	0.81	-0.9
3,437,799	-		DZA65_RS15825	0.81	+0.5
3,437,799	-		DZA65_RS15825	0.81	+0.5
3,437,799	-		DZA65_RS15825	0.81	-0.4
3,437,799	-		DZA65_RS15825	0.81	-0.6
3,437,799	-		DZA65_RS15825	0.81	+1.0
3,437,799	-		DZA65_RS15825	0.81	-1.7
3,437,817	+		DZA65_RS15825	0.84	+0.3
3,437,930	+				+0.2
3,437,931	-				-2.2
3,438,035	+				+0.4
3,438,042	-				+1.0
3,438,681	+		DZA65_RS15830	0.37	+0.7
3,438,681	+		DZA65_RS15830	0.37	-0.2
3,438,681	+		DZA65_RS15830	0.37	-1.2
3,438,681	+		DZA65_RS15830	0.37	-0.8
3,438,681	+		DZA65_RS15830	0.37	+0.3
3,438,681	+				+1.4
3,438,682	-		DZA65_RS15830	0.37	+0.1
3,438,682	-		DZA65_RS15830	0.37	+0.8
3,438,682	-		DZA65_RS15830	0.37	-1.8
3,438,682	-		DZA65_RS15830	0.37	-0.4
3,438,682	-		DZA65_RS15830	0.37	-0.7
3,438,715	+		DZA65_RS15830	0.39	-1.5
3,438,749	-		DZA65_RS15830	0.41	-1.3
3,438,906	+		DZA65_RS15830	0.50	-0.1