Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS15075

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,288,219	-		DZA65_RS15070	0.29	-0.5
3,288,364	+		DZA65_RS15070	0.39	-2.0
3,288,431	-		DZA65_RS15070	0.44	+0.2
3,288,528	-		DZA65_RS15070	0.50	+2.4
3,288,565	+		DZA65_RS15070	0.53	+0.5
3,288,566	-		DZA65_RS15070	0.53	-0.8
3,288,566	-		DZA65_RS15070	0.53	+0.2
3,288,706	+		DZA65_RS15070	0.63	+0.5
3,288,706	+		DZA65_RS15070	0.63	-0.2
3,288,724	+		DZA65_RS15070	0.64	-0.4
3,288,724	+		DZA65_RS15070	0.64	-0.0
3,288,724	+		DZA65_RS15070	0.64	-0.9
3,288,724	+		DZA65_RS15070	0.64	+0.5
3,288,725	-		DZA65_RS15070	0.64	-0.9
3,288,725	-		DZA65_RS15070	0.64	+0.4
3,288,790	+		DZA65_RS15070	0.69	+0.8
3,288,790	+		DZA65_RS15070	0.69	-0.5
3,288,791	-		DZA65_RS15070	0.69	+0.1
3,288,791	-		DZA65_RS15070	0.69	-0.2
3,288,791	-		DZA65_RS15070	0.69	+1.0
3,288,791	-		DZA65_RS15070	0.69	+0.5
3,288,802	+		DZA65_RS15070	0.70	-0.2
3,288,803	-		DZA65_RS15070	0.70	+0.4
3,288,877	+		DZA65_RS15070	0.75	-0.8
3,288,877	+		DZA65_RS15070	0.75	-0.3
3,288,956	+		DZA65_RS15070	0.81	-0.2
3,288,956	+		DZA65_RS15070	0.81	-1.7
3,288,956	+		DZA65_RS15070	0.81	+0.7
3,288,956	+		DZA65_RS15070	0.81	+0.6
3,288,956	+		DZA65_RS15070	0.81	-0.4
3,288,957	-		DZA65_RS15070	0.81	-1.4
3,288,957	-		DZA65_RS15070	0.81	+1.1
3,288,957	-		DZA65_RS15070	0.81	-0.2
3,288,957	-		DZA65_RS15070	0.81	+0.3
3,288,957	-		DZA65_RS15070	0.81	-0.8
3,288,966	+		DZA65_RS15070	0.81	+1.0
3,288,966	+		DZA65_RS15070	0.81	+1.1
3,288,966	+		DZA65_RS15070	0.81	+0.5
3,288,967	-		DZA65_RS15070	0.81	+0.1
3,288,967	-		DZA65_RS15070	0.81	+0.2
3,288,967	-		DZA65_RS15070	0.81	-0.2
3,288,967	-		DZA65_RS15070	0.81	+0.0
3,288,967	-		DZA65_RS15070	0.81	-1.4
3,288,967	-		DZA65_RS15070	0.81	+1.0
3,288,967	-		DZA65_RS15070	0.81	+0.8
3,288,967	-		DZA65_RS15070	0.81	-0.7
3,288,972	+		DZA65_RS15070	0.82	-0.6
3,288,972	+		DZA65_RS15070	0.82	+0.2
3,289,026	+		DZA65_RS15070	0.86	-0.0
3,289,026	+		DZA65_RS15070	0.86	-0.7
3,289,026	+		DZA65_RS15070	0.86	-0.9
3,289,027	-		DZA65_RS15070	0.86	-0.5
3,289,112	+				-0.7
3,289,113	-				-0.6
3,289,113	-				+0.6
3,289,113	-				+0.0
3,289,113	-				-0.3
3,289,113	-				-1.0
3,289,113	-				-1.0
3,289,171	-				+0.4
3,289,219	+				+0.2
3,289,219	+				+0.1
3,289,239	+		DZA65_RS15075	0.10	+0.7
3,289,321	+		DZA65_RS15075	0.50	+0.4
3,289,321	+		DZA65_RS15075	0.50	+0.6
3,289,321	+		DZA65_RS15075	0.50	-0.2
3,289,321	+		DZA65_RS15075	0.50	-0.5
3,289,321	+		DZA65_RS15075	0.50	-1.9
3,289,321	+		DZA65_RS15075	0.50	+0.6
3,289,321	+		DZA65_RS15075	0.50	+0.1
3,289,322	-		DZA65_RS15075	0.51	+0.0
3,289,322	-		DZA65_RS15075	0.51	-0.6
3,289,322	-		DZA65_RS15075	0.51	+0.5
3,289,322	-		DZA65_RS15075	0.51	-0.2
3,289,322	-		DZA65_RS15075	0.51	+1.6
3,289,322	-		DZA65_RS15075	0.51	-0.0
3,289,322	-		DZA65_RS15075	0.51	+1.5
3,289,322	-		DZA65_RS15075	0.51	+1.2
3,289,322	-		DZA65_RS15075	0.51	+0.2
3,289,322	-				-0.0
3,289,324	+		DZA65_RS15075	0.52	-0.9
3,289,324	+		DZA65_RS15075	0.52	-0.1
3,289,324	+		DZA65_RS15075	0.52	+0.5
3,289,325	-		DZA65_RS15075	0.52	-0.1
3,289,325	-		DZA65_RS15075	0.52	-0.0
3,289,325	-		DZA65_RS15075	0.52	+0.6
3,289,325	-		DZA65_RS15075	0.52	+1.1
3,289,358	+		DZA65_RS15075	0.69	+0.4
3,289,359	-		DZA65_RS15075	0.69	-0.8
3,289,363	+		DZA65_RS15075	0.71	+0.7
3,289,363	+		DZA65_RS15075	0.71	-0.6
3,289,412	+				-1.2
3,289,413	-				-1.0
3,289,413	-				+0.6
3,289,419	+				-0.5
3,289,419	+				-0.1
3,289,420	-				-0.3
3,289,420	-				+0.6
3,289,482	-		DZA65_RS15080	0.11	+1.0
3,289,485	+		DZA65_RS15080	0.11	-0.4
3,289,485	+		DZA65_RS15080	0.11	-0.8
3,289,485	+		DZA65_RS15080	0.11	+0.3
3,289,485	+		DZA65_RS15080	0.11	+0.1
3,289,485	+				+1.4
3,289,485	+		DZA65_RS15080	0.11	-0.4
3,289,485	+		DZA65_RS15080	0.11	+0.6
3,289,485	+		DZA65_RS15080	0.11	-0.3
3,289,486	-		DZA65_RS15080	0.11	-1.5
3,289,586	+		DZA65_RS15080	0.27	+1.3
3,289,586	+		DZA65_RS15080	0.27	-0.2
3,289,587	-		DZA65_RS15080	0.27	-1.0
3,289,880	+		DZA65_RS15080	0.71	+1.0
3,289,881	-		DZA65_RS15080	0.71	-1.6
3,289,881	-		DZA65_RS15080	0.71	-0.6
3,289,884	+		DZA65_RS15080	0.72	+0.3
3,289,884	+		DZA65_RS15080	0.72	-0.3
3,289,884	+		DZA65_RS15080	0.72	-0.0
3,289,884	+		DZA65_RS15080	0.72	-1.2
3,289,884	+		DZA65_RS15080	0.72	+0.2
3,289,884	+		DZA65_RS15080	0.72	-2.4
3,289,885	-		DZA65_RS15080	0.72	-1.0
3,289,885	-		DZA65_RS15080	0.72	-2.8
3,289,885	-		DZA65_RS15080	0.72	-0.5
3,289,885	-		DZA65_RS15080	0.72	-0.7
3,289,885	-		DZA65_RS15080	0.72	-1.1
3,289,885	-		DZA65_RS15080	0.72	+1.0
3,289,885	-		DZA65_RS15080	0.72	+1.2
3,289,891	-		DZA65_RS15080	0.73	+1.0
3,289,995	-		DZA65_RS15080	0.88	-0.8
3,290,046	+				-0.9
3,290,046	+				-1.0
3,290,047	-				+0.2
3,290,047	-				+0.6
3,290,047	-				-0.2
3,290,047	-				-0.3
3,290,047	-				-0.2
3,290,138	+		DZA65_RS15085	0.14	-0.7
3,290,139	-		DZA65_RS15085	0.15	-0.9
3,290,139	-		DZA65_RS15085	0.15	-0.6
3,290,139	-		DZA65_RS15085	0.15	-1.8
3,290,236	+		DZA65_RS15085	0.37	+0.3
3,290,236	+		DZA65_RS15085	0.37	+0.8
3,290,237	-		DZA65_RS15085	0.37	-0.3
3,290,237	-		DZA65_RS15085	0.37	-1.0
3,290,237	-		DZA65_RS15085	0.37	+0.0
3,290,237	-		DZA65_RS15085	0.37	-2.4
3,290,237	-		DZA65_RS15085	0.37	+0.6
3,290,237	-		DZA65_RS15085	0.37	+0.3
3,290,268	-		DZA65_RS15085	0.44	+1.9
3,290,365	+		DZA65_RS15085	0.67	-0.5
3,290,365	+		DZA65_RS15085	0.67	+1.0
3,290,365	+		DZA65_RS15085	0.67	-0.0
3,290,365	+		DZA65_RS15085	0.67	-0.4
3,290,365	+		DZA65_RS15085	0.67	-0.4
3,290,365	+		DZA65_RS15085	0.67	-0.4
3,290,365	+		DZA65_RS15085	0.67	+0.3
3,290,366	-		DZA65_RS15085	0.67	-0.0
3,290,366	-		DZA65_RS15085	0.67	-0.7
3,290,366	-		DZA65_RS15085	0.67	-0.0
3,290,409	+		DZA65_RS15085	0.77	+0.8
3,290,410	-		DZA65_RS15085	0.77	-0.0
3,290,410	-		DZA65_RS15085	0.77	+0.3