Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS14600

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,176,511	-				-2.1
3,176,573	+				+1.9
3,176,574	-				+0.5
3,176,574	-				-0.4
3,176,640	-				-1.5
3,176,676	+				-0.9
3,176,702	-				-0.0
3,176,725	+				-0.7
3,176,726	-				-0.1
3,176,787	+				-1.2
3,176,806	-				-0.3
3,176,820	+				-1.3
3,176,860	-				-0.7
3,176,943	-		DZA65_RS14595	0.16	+0.5
3,176,953	+		DZA65_RS14595	0.18	-0.7
3,176,954	-		DZA65_RS14595	0.18	-0.4
3,176,959	-		DZA65_RS14595	0.19	-1.2
3,177,004	-		DZA65_RS14595	0.27	+1.3
3,177,037	+		DZA65_RS14595	0.34	-0.1
3,177,037	+		DZA65_RS14595	0.34	-0.3
3,177,037	+		DZA65_RS14595	0.34	-0.3
3,177,037	+		DZA65_RS14595	0.34	+0.1
3,177,037	+		DZA65_RS14595	0.34	+0.3
3,177,037	+		DZA65_RS14595	0.34	-0.7
3,177,037	+		DZA65_RS14595	0.34	+1.4
3,177,037	+		DZA65_RS14595	0.34	+0.9
3,177,037	+		DZA65_RS14595	0.34	+0.5
3,177,037	+				+0.9
3,177,037	+		DZA65_RS14595	0.34	-1.1
3,177,037	+		DZA65_RS14595	0.34	+1.1
3,177,037	+		DZA65_RS14595	0.34	+0.3
3,177,038	-		DZA65_RS14595	0.34	+0.1
3,177,038	-		DZA65_RS14595	0.34	-0.7
3,177,038	-		DZA65_RS14595	0.34	-0.6
3,177,038	-		DZA65_RS14595	0.34	+1.9
3,177,038	-		DZA65_RS14595	0.34	-1.3
3,177,038	-		DZA65_RS14595	0.34	-0.2
3,177,038	-		DZA65_RS14595	0.34	-1.4
3,177,038	-		DZA65_RS14595	0.34	+0.2
3,177,038	-		DZA65_RS14595	0.34	-1.3
3,177,038	-		DZA65_RS14595	0.34	+0.5
3,177,038	-		DZA65_RS14595	0.34	-0.6
3,177,101	+		DZA65_RS14595	0.46	-1.1
3,177,101	+		DZA65_RS14595	0.46	+0.1
3,177,101	+		DZA65_RS14595	0.46	+0.0
3,177,101	+		DZA65_RS14595	0.46	+0.0
3,177,101	+		DZA65_RS14595	0.46	+0.1
3,177,101	+		DZA65_RS14595	0.46	-1.0
3,177,101	+		DZA65_RS14595	0.46	-0.2
3,177,102	-		DZA65_RS14595	0.46	-0.6
3,177,102	-		DZA65_RS14595	0.46	-0.2
3,177,102	-		DZA65_RS14595	0.46	+0.3
3,177,102	-		DZA65_RS14595	0.46	-0.6
3,177,113	+		DZA65_RS14595	0.48	+0.2
3,177,113	+		DZA65_RS14595	0.48	-0.1
3,177,113	+		DZA65_RS14595	0.48	-0.3
3,177,113	+		DZA65_RS14595	0.48	-0.4
3,177,113	+		DZA65_RS14595	0.48	-0.8
3,177,114	-		DZA65_RS14595	0.48	-0.2
3,177,114	-		DZA65_RS14595	0.48	-1.4
3,177,130	+		DZA65_RS14595	0.51	-0.7
3,177,131	-		DZA65_RS14595	0.51	+0.5
3,177,131	-		DZA65_RS14595	0.51	+0.3
3,177,131	-		DZA65_RS14595	0.51	-0.4
3,177,133	+		DZA65_RS14595	0.52	+0.2
3,177,133	+		DZA65_RS14595	0.52	+0.2
3,177,133	+		DZA65_RS14595	0.52	-0.3
3,177,175	+		DZA65_RS14595	0.60	-0.9
3,177,176	-		DZA65_RS14595	0.60	+1.2
3,177,234	-		DZA65_RS14595	0.71	+0.1
3,177,259	+		DZA65_RS14595	0.76	-0.1
3,177,260	-		DZA65_RS14595	0.76	-0.3
3,177,261	+		DZA65_RS14595	0.76	+0.4
3,177,261	+		DZA65_RS14595	0.76	+0.5
3,177,261	+		DZA65_RS14595	0.76	-0.4
3,177,261	+		DZA65_RS14595	0.76	+0.1
3,177,261	+		DZA65_RS14595	0.76	-0.1
3,177,261	+		DZA65_RS14595	0.76	-0.4
3,177,261	+		DZA65_RS14595	0.76	-0.9
3,177,261	+		DZA65_RS14595	0.76	+0.9
3,177,261	+		DZA65_RS14595	0.76	-0.6
3,177,261	+		DZA65_RS14595	0.76	+0.9
3,177,262	-		DZA65_RS14595	0.76	-0.3
3,177,262	-		DZA65_RS14595	0.76	+0.4
3,177,262	-		DZA65_RS14595	0.76	+0.8
3,177,262	-				+0.9
3,177,262	-		DZA65_RS14595	0.76	+0.4
3,177,262	-		DZA65_RS14595	0.76	-0.4
3,177,262	-		DZA65_RS14595	0.76	-0.7
3,177,262	-		DZA65_RS14595	0.76	-0.3
3,177,265	+		DZA65_RS14595	0.77	-2.2
3,177,265	+		DZA65_RS14595	0.77	-1.1
3,177,265	+		DZA65_RS14595	0.77	-0.0
3,177,265	+		DZA65_RS14595	0.77	+1.2
3,177,265	+		DZA65_RS14595	0.77	-0.3
3,177,265	+		DZA65_RS14595	0.77	-1.6
3,177,265	+		DZA65_RS14595	0.77	+0.1
3,177,265	+		DZA65_RS14595	0.77	-1.3
3,177,266	-		DZA65_RS14595	0.77	+0.9
3,177,266	-		DZA65_RS14595	0.77	-0.4
3,177,266	-		DZA65_RS14595	0.77	-0.3
3,177,266	-		DZA65_RS14595	0.77	+0.3
3,177,266	-		DZA65_RS14595	0.77	-0.9
3,177,266	-		DZA65_RS14595	0.77	-0.4
3,177,266	-		DZA65_RS14595	0.77	+0.4
3,177,266	-		DZA65_RS14595	0.77	-0.3
3,177,310	-		DZA65_RS14595	0.85	-1.1
3,177,334	+		DZA65_RS14595	0.90	+0.2
3,177,334	+		DZA65_RS14595	0.90	-0.5
3,177,335	-				+1.4
3,177,335	-				+0.5
3,177,335	-				-0.2
3,177,335	-				-0.3
3,177,335	-				+0.2
3,177,365	-				-0.6
3,177,376	-				-1.0
3,177,376	-				-0.7
3,177,389	-				-0.6
3,177,389	-				+0.2
3,177,392	-				-0.4
3,177,394	-				+0.6
3,177,432	+				-0.6
3,177,478	-				+0.1
3,177,491	+				-0.3
3,177,501	+				+0.5
3,177,525	+				-1.3
3,177,599	+		DZA65_RS14600	0.15	-0.5
3,177,599	+		DZA65_RS14600	0.15	-1.5
3,177,599	+		DZA65_RS14600	0.15	-0.5
3,177,651	+		DZA65_RS14600	0.20	-0.4
3,177,713	+		DZA65_RS14600	0.27	+1.1
3,177,713	+		DZA65_RS14600	0.27	+0.4
3,177,713	+		DZA65_RS14600	0.27	-0.8
3,177,713	+		DZA65_RS14600	0.27	-0.5
3,177,714	-		DZA65_RS14600	0.27	+1.2
3,177,771	-		DZA65_RS14600	0.33	-0.4
3,177,778	-		DZA65_RS14600	0.33	+0.2
3,177,778	-		DZA65_RS14600	0.33	-0.4
3,177,790	+		DZA65_RS14600	0.35	+0.5
3,177,791	-		DZA65_RS14600	0.35	+0.5
3,177,791	-		DZA65_RS14600	0.35	-0.1
3,177,793	+		DZA65_RS14600	0.35	-0.9
3,177,793	+		DZA65_RS14600	0.35	-0.4
3,177,793	+		DZA65_RS14600	0.35	-0.1
3,177,793	+		DZA65_RS14600	0.35	-0.5
3,177,793	+		DZA65_RS14600	0.35	-0.9
3,177,793	+		DZA65_RS14600	0.35	-0.8
3,177,793	+		DZA65_RS14600	0.35	-0.9
3,177,794	-		DZA65_RS14600	0.35	-0.6
3,177,794	-		DZA65_RS14600	0.35	-1.3
3,177,794	-		DZA65_RS14600	0.35	-0.7
3,177,794	-		DZA65_RS14600	0.35	+0.9
3,177,794	-		DZA65_RS14600	0.35	-0.1
3,177,794	-		DZA65_RS14600	0.35	-1.3
3,177,794	-		DZA65_RS14600	0.35	-1.9
3,177,824	+		DZA65_RS14600	0.38	+0.6
3,177,825	-		DZA65_RS14600	0.38	+0.9
3,177,838	+		DZA65_RS14600	0.39	-0.1
3,177,852	-		DZA65_RS14600	0.41	-0.7
3,177,858	+		DZA65_RS14600	0.41	-2.1
3,177,858	+		DZA65_RS14600	0.41	-0.0
3,177,858	+		DZA65_RS14600	0.41	-0.9
3,177,858	+		DZA65_RS14600	0.41	-0.5
3,177,858	+		DZA65_RS14600	0.41	+0.1
3,177,858	+		DZA65_RS14600	0.41	+0.0
3,177,859	-		DZA65_RS14600	0.42	+0.0
3,177,859	-		DZA65_RS14600	0.42	-0.5
3,177,859	-		DZA65_RS14600	0.42	-1.0
3,177,859	-				+1.5
3,177,861	+		DZA65_RS14600	0.42	-0.7
3,177,873	+		DZA65_RS14600	0.43	-0.2
3,177,873	+		DZA65_RS14600	0.43	+0.6
3,177,874	-		DZA65_RS14600	0.43	-0.9
3,177,985	+		DZA65_RS14600	0.54	+0.8
3,177,986	-		DZA65_RS14600	0.55	+0.1
3,177,991	+		DZA65_RS14600	0.55	+1.9
3,177,992	-		DZA65_RS14600	0.55	-1.9
3,177,992	-		DZA65_RS14600	0.55	-0.2
3,177,992	-		DZA65_RS14600	0.55	-1.3
3,177,992	-		DZA65_RS14600	0.55	-0.1
3,178,072	-		DZA65_RS14600	0.63	+0.6
3,178,072	-				+0.2
3,178,102	-		DZA65_RS14600	0.66	-0.5
3,178,113	+		DZA65_RS14600	0.67	-0.5
3,178,114	-		DZA65_RS14600	0.68	-0.7
3,178,153	-		DZA65_RS14600	0.72	+0.8
3,178,159	-		DZA65_RS14600	0.72	-0.7
3,178,173	+		DZA65_RS14600	0.74	-0.2
3,178,173	+		DZA65_RS14600	0.74	-0.7
3,178,173	+		DZA65_RS14600	0.74	-0.1
3,178,173	+		DZA65_RS14600	0.74	-0.3
3,178,173	+		DZA65_RS14600	0.74	-1.0
3,178,174	-		DZA65_RS14600	0.74	+0.4
3,178,174	-		DZA65_RS14600	0.74	-1.2
3,178,174	-		DZA65_RS14600	0.74	-1.7
3,178,174	-		DZA65_RS14600	0.74	-0.0
3,178,174	-		DZA65_RS14600	0.74	-1.1
3,178,174	-		DZA65_RS14600	0.74	-0.8
3,178,174	-		DZA65_RS14600	0.74	-0.8
3,178,209	+		DZA65_RS14600	0.77	-0.6
3,178,210	-		DZA65_RS14600	0.77	-0.4
3,178,239	-		DZA65_RS14600	0.80	-0.3
3,178,239	-		DZA65_RS14600	0.80	-0.1
3,178,239	-		DZA65_RS14600	0.80	-0.1
3,178,324	-		DZA65_RS14600	0.89	-0.1
3,178,334	-				-0.9
3,178,431	+				-0.5
3,178,432	-				-0.7
3,178,434	+				-0.7
3,178,497	+				-1.1
3,178,498	-				-2.4
3,178,498	-				+0.3
3,178,498	-				+0.2
3,178,498	-				-0.8
3,178,499	+				-1.6
3,178,500	-				-0.7
3,178,518	-				-1.0
3,178,518	-				-1.7
3,178,540	-				+0.6
3,178,546	-				-0.8
3,178,546	-				-0.1
3,178,546	-				-0.4
3,178,547	+				+0.6
3,178,548	-				-0.8
3,178,548	-				-0.1
3,178,597	+				-0.5
3,178,598	-				+0.6
3,178,605	+				-0.4
3,178,606	-				-0.1
3,178,606	-				-0.7
3,178,638	-				+0.1
3,178,713	-		DZA65_RS14605	0.15	-0.5
3,178,717	+		DZA65_RS14605	0.15	-0.1
3,178,718	-		DZA65_RS14605	0.15	+1.3
3,178,718	-				+0.3
3,178,718	-		DZA65_RS14605	0.15	-0.2
3,178,722	+		DZA65_RS14605	0.16	-0.7
3,178,722	+		DZA65_RS14605	0.16	-0.1
3,178,723	-		DZA65_RS14605	0.16	-0.9
3,178,723	-		DZA65_RS14605	0.16	-0.3
3,178,723	-		DZA65_RS14605	0.16	-0.6
3,178,723	-		DZA65_RS14605	0.16	-0.4
3,178,724	+		DZA65_RS14605	0.16	-0.3
3,178,725	-		DZA65_RS14605	0.16	-0.8
3,178,725	-		DZA65_RS14605	0.16	-0.1
3,178,725	-		DZA65_RS14605	0.16	+0.0
3,178,725	-		DZA65_RS14605	0.16	-0.4
3,178,771	-		DZA65_RS14605	0.20	-1.7
3,178,771	-		DZA65_RS14605	0.20	-0.7
3,178,771	-		DZA65_RS14605	0.20	+0.9
3,178,771	-		DZA65_RS14605	0.20	-0.4
3,178,771	-		DZA65_RS14605	0.20	+0.0
3,178,773	+		DZA65_RS14605	0.20	+1.3
3,178,827	+				-1.1
3,178,827	+		DZA65_RS14605	0.25	+0.4
3,178,828	-		DZA65_RS14605	0.25	-0.2
3,178,847	+		DZA65_RS14605	0.26	-0.6
3,178,847	+		DZA65_RS14605	0.26	-2.0
3,178,864	+		DZA65_RS14605	0.28	-0.2
3,178,864	+		DZA65_RS14605	0.28	+0.4
3,178,864	+		DZA65_RS14605	0.28	+0.8
3,178,865	-		DZA65_RS14605	0.28	-0.1
3,178,865	-		DZA65_RS14605	0.28	+0.9
3,178,865	-		DZA65_RS14605	0.28	-0.5
3,178,865	-		DZA65_RS14605	0.28	+0.3
3,178,871	+		DZA65_RS14605	0.28	-0.8
3,178,871	+		DZA65_RS14605	0.28	+1.3
3,178,871	+		DZA65_RS14605	0.28	-0.1
3,178,871	+		DZA65_RS14605	0.28	-0.3
3,178,903	+		DZA65_RS14605	0.31	-0.9
3,178,903	+		DZA65_RS14605	0.31	-0.4
3,178,904	-		DZA65_RS14605	0.31	-1.9
3,178,906	+		DZA65_RS14605	0.31	-1.3
3,178,906	+		DZA65_RS14605	0.31	+0.4
3,178,906	+		DZA65_RS14605	0.31	-1.1
3,178,907	-		DZA65_RS14605	0.31	-0.3
3,178,907	-		DZA65_RS14605	0.31	+0.1
3,178,994	+		DZA65_RS14605	0.39	-1.9
3,178,995	-		DZA65_RS14605	0.39	-1.0
3,178,995	-		DZA65_RS14605	0.39	+0.1
3,178,995	-		DZA65_RS14605	0.39	-0.4
3,178,995	-		DZA65_RS14605	0.39	-0.1
3,178,995	-		DZA65_RS14605	0.39	-0.4
3,178,999	+		DZA65_RS14605	0.39	-0.1
3,179,000	-		DZA65_RS14605	0.39	-0.9
3,179,027	+		DZA65_RS14605	0.41	+0.4
3,179,027	+		DZA65_RS14605	0.41	+0.4
3,179,028	-		DZA65_RS14605	0.41	-1.1
3,179,028	-		DZA65_RS14605	0.41	-0.6
3,179,028	-		DZA65_RS14605	0.41	-1.7
3,179,043	+		DZA65_RS14605	0.43	-0.1
3,179,058	+		DZA65_RS14605	0.44	+0.4
3,179,058	+		DZA65_RS14605	0.44	-1.7
3,179,059	-		DZA65_RS14605	0.44	-2.1
3,179,059	-		DZA65_RS14605	0.44	-0.9
3,179,059	-		DZA65_RS14605	0.44	+0.9
3,179,065	-		DZA65_RS14605	0.44	-0.3
3,179,065	-		DZA65_RS14605	0.44	-0.7
3,179,065	-		DZA65_RS14605	0.44	+0.5
3,179,065	-		DZA65_RS14605	0.44	-0.3
3,179,065	-		DZA65_RS14605	0.44	+0.0
3,179,065	-		DZA65_RS14605	0.44	-0.6
3,179,089	+		DZA65_RS14605	0.46	-0.3
3,179,090	-		DZA65_RS14605	0.47	-0.3
3,179,090	-		DZA65_RS14605	0.47	+0.7
3,179,090	-		DZA65_RS14605	0.47	+0.9
3,179,090	-		DZA65_RS14605	0.47	-1.4
3,179,133	+		DZA65_RS14605	0.50	-0.4
3,179,133	+		DZA65_RS14605	0.50	+1.3
3,179,134	-				+2.1
3,179,134	-		DZA65_RS14605	0.50	+0.9
3,179,146	-		DZA65_RS14605	0.51	-0.8
3,179,167	-		DZA65_RS14605	0.53	+0.4
3,179,178	+		DZA65_RS14605	0.54	-0.5
3,179,178	+		DZA65_RS14605	0.54	-0.7
3,179,179	-		DZA65_RS14605	0.54	+0.0
3,179,191	-		DZA65_RS14605	0.55	-1.3
3,179,231	-		DZA65_RS14605	0.58	-0.4
3,179,241	+		DZA65_RS14605	0.59	-0.4
3,179,252	-		DZA65_RS14605	0.60	-0.4
3,179,252	-		DZA65_RS14605	0.60	-1.6
3,179,256	-		DZA65_RS14605	0.60	+0.5
3,179,256	-		DZA65_RS14605	0.60	-0.7
3,179,271	+		DZA65_RS14605	0.62	-1.7
3,179,273	+		DZA65_RS14605	0.62	-2.3
3,179,287	+		DZA65_RS14605	0.63	-1.4
3,179,306	-		DZA65_RS14605	0.65	-1.3
3,179,362	-		DZA65_RS14605	0.69	+0.2
3,179,364	+		DZA65_RS14605	0.70	-0.3
3,179,364	+		DZA65_RS14605	0.70	+0.6
3,179,364	+		DZA65_RS14605	0.70	-0.5
3,179,369	-		DZA65_RS14605	0.70	-1.3
3,179,403	+		DZA65_RS14605	0.73	-1.3
3,179,403	+		DZA65_RS14605	0.73	-0.2
3,179,407	-		DZA65_RS14605	0.73	-3.0