Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS13315

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,849,099	+				-0.8
2,849,099	+				+0.1
2,849,099	+				+0.5
2,849,099	+				-0.4
2,849,099	+				-1.7
2,849,099	+				-0.5
2,849,100	-				+0.2
2,849,100	-				+0.0
2,849,101	+				+0.1
2,849,102	-				-0.4
2,849,145	+				-0.6
2,849,146	-				+0.9
2,849,146	-				+1.0
2,849,146	-				-0.4
2,849,146	-				+0.4
2,849,146	-				-0.4
2,849,240	+		DZA65_RS13310	0.17	+0.3
2,849,240	+		DZA65_RS13310	0.17	+1.0
2,849,338	-		DZA65_RS13310	0.43	-0.7
2,849,378	+		DZA65_RS13310	0.54	-1.5
2,849,378	+		DZA65_RS13310	0.54	-1.0
2,849,379	-		DZA65_RS13310	0.54	+1.1
2,849,379	-		DZA65_RS13310	0.54	-0.5
2,849,383	-		DZA65_RS13310	0.55	+0.5
2,849,464	+		DZA65_RS13310	0.77	-1.1
2,849,465	-		DZA65_RS13310	0.77	+0.1
2,849,531	+				+1.9
2,849,531	+				-0.6
2,849,531	+				-0.4
2,849,532	-				-1.1
2,849,532	-				+0.9
2,849,532	-				-0.9
2,849,532	-				-0.7
2,849,532	-				+0.9
2,849,570	+				+0.2
2,849,570	+				-0.8
2,849,649	-				+0.2
2,849,678	-				-0.4
2,849,681	+				-0.2
2,849,724	+				-0.4
2,849,724	+				-1.1
2,849,724	+				-0.5
2,849,725	-				+0.7
2,849,725	-				-0.2
2,849,725	-				+1.2
2,849,806	+				+0.6
2,849,820	+				-2.1
2,849,821	-				+0.4
2,849,821	-				+0.5
2,849,823	-				-0.3
2,849,823	-				+0.4
2,849,841	-				-0.2
2,849,842	+				-1.1
2,849,843	-				+0.4
2,849,843	-				+0.9
2,849,843	-				-0.7
2,849,846	+				-0.1
2,849,847	-				-0.2
2,849,854	+				-1.5
2,849,865	-				+0.2
2,849,881	+				-0.9
2,849,890	+				+0.6
2,849,890	+				-0.6
2,849,892	+				+0.1
2,849,964	-				+0.9
2,849,964	-				-0.3
2,850,019	+				-1.1
2,850,083	+				+0.9
2,850,084	-				-0.1
2,850,084	-				-0.4
2,850,084	-				-2.0
2,850,095	+				+0.1
2,850,096	-				-0.6
2,850,096	-				-0.6
2,850,174	+		DZA65_RS13315	0.19	-0.7
2,850,231	+		DZA65_RS13315	0.34	-0.7
2,850,231	+		DZA65_RS13315	0.34	+0.9
2,850,232	-		DZA65_RS13315	0.34	-0.8
2,850,232	-		DZA65_RS13315	0.34	-0.3
2,850,232	-		DZA65_RS13315	0.34	+0.5
2,850,232	-		DZA65_RS13315	0.34	+2.1
2,850,232	-		DZA65_RS13315	0.34	+0.3
2,850,234	+		DZA65_RS13315	0.34	+0.9
2,850,234	+		DZA65_RS13315	0.34	-0.9
2,850,234	+		DZA65_RS13315	0.34	+0.1
2,850,234	+		DZA65_RS13315	0.34	+0.7
2,850,292	-		DZA65_RS13315	0.49	+0.9
2,850,292	-		DZA65_RS13315	0.49	+0.2
2,850,292	-		DZA65_RS13315	0.49	+0.6
2,850,292	-		DZA65_RS13315	0.49	-0.9
2,850,378	+		DZA65_RS13315	0.70	+0.2
2,850,381	+		DZA65_RS13315	0.71	-0.9
2,850,381	+		DZA65_RS13315	0.71	+0.7
2,850,381	+		DZA65_RS13315	0.71	+0.6
2,850,381	+		DZA65_RS13315	0.71	-0.4
2,850,381	+		DZA65_RS13315	0.71	+0.3
2,850,382	-		DZA65_RS13315	0.71	-1.3
2,850,382	-		DZA65_RS13315	0.71	+0.4
2,850,382	-		DZA65_RS13315	0.71	+0.9
2,850,413	+		DZA65_RS13315	0.79	+0.1
2,850,413	+		DZA65_RS13315	0.79	+0.2
2,850,470	+				-1.6
2,850,471	-				-0.3
2,850,471	-				+0.0
2,850,640	+		DZA65_RS13320	0.17	+0.5
2,850,673	+		DZA65_RS13320	0.25	-0.5
2,850,749	+		DZA65_RS13320	0.43	-0.7
2,850,780	+		DZA65_RS13320	0.50	-0.9
2,850,781	-		DZA65_RS13320	0.50	-0.3
2,850,862	+		DZA65_RS13320	0.69	+0.5
2,850,967	+				-1.9
2,850,967	+				+0.1
2,850,967	+				-0.2
2,850,971	+				+1.1
2,850,971	+				-0.1
2,850,971	+				+1.0
2,850,971	+				-2.5
2,850,972	-				+0.1
2,850,972	-				-0.0
2,850,972	-				+1.3
2,850,972	-				-0.4
2,850,972	-				+0.9
2,850,976	+				+0.5
2,850,976	+				+0.9
2,850,976	+				-0.8
2,850,977	-				+0.9
2,850,977	-				+0.9
2,850,977	-				+0.1
2,850,977	-				-1.1
2,851,071	-				-2.3
2,851,133	+				+1.0
2,851,133	+				-0.2
2,851,133	+				+0.9
2,851,133	+				-0.5
2,851,133	+				-0.5
2,851,133	+				-1.3
2,851,133	+				+0.5
2,851,133	+				+0.1
2,851,133	+				+0.5
2,851,133	+				+0.1
2,851,133	+				-1.1
2,851,133	+				-2.1
2,851,134	-				+2.1
2,851,134	-				-0.3
2,851,134	-				+0.2
2,851,134	-				+0.2
2,851,134	-				-0.1
2,851,134	-				+0.5
2,851,134	-				-0.6
2,851,134	-				-0.8
2,851,134	-				+1.9
2,851,134	-				+0.3
2,851,134	-				-0.6
2,851,134	-				-0.1
2,851,134	-				+0.3
2,851,134	-				+0.6
2,851,134	-				-0.9
2,851,134	-				-0.5
2,851,134	-				+0.9
2,851,175	+				+0.5
2,851,175	+				-0.5
2,851,175	+				+0.7
2,851,176	-				-0.8
2,851,176	-				-0.3
2,851,176	-				+0.2
2,851,176	-				+1.2
2,851,176	-				-0.3
2,851,176	-				+0.5
2,851,288	-				-0.5
2,851,304	+		DZA65_RS13325	0.10	-0.6
2,851,305	-		DZA65_RS13325	0.10	-1.4