Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12825

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,748,340	+		DZA65_RS12820	0.51	-1.3
2,748,364	+		DZA65_RS12820	0.52	-0.1
2,748,364	+		DZA65_RS12820	0.52	+0.3
2,748,364	+				+0.1
2,748,365	-		DZA65_RS12820	0.52	-0.3
2,748,365	-		DZA65_RS12820	0.52	+1.2
2,748,392	-		DZA65_RS12820	0.54	+1.1
2,748,483	+		DZA65_RS12820	0.60	+0.9
2,748,560	-		DZA65_RS12820	0.65	+0.1
2,748,580	-		DZA65_RS12820	0.66	-0.0
2,748,596	-		DZA65_RS12820	0.67	-0.6
2,748,596	-		DZA65_RS12820	0.67	-1.7
2,748,596	-		DZA65_RS12820	0.67	+0.3
2,748,598	+		DZA65_RS12820	0.67	+1.1
2,748,598	+		DZA65_RS12820	0.67	-0.1
2,748,598	+		DZA65_RS12820	0.67	-1.9
2,748,599	-		DZA65_RS12820	0.67	-0.0
2,748,599	-		DZA65_RS12820	0.67	-0.9
2,748,599	-		DZA65_RS12820	0.67	+0.1
2,748,599	-		DZA65_RS12820	0.67	+1.7
2,748,599	-		DZA65_RS12820	0.67	-0.1
2,748,628	+		DZA65_RS12820	0.69	-0.3
2,748,628	+		DZA65_RS12820	0.69	-1.1
2,748,628	+		DZA65_RS12820	0.69	+0.7
2,748,629	-		DZA65_RS12820	0.69	-1.3
2,748,629	-		DZA65_RS12820	0.69	+0.5
2,748,629	-		DZA65_RS12820	0.69	-0.1
2,748,629	-		DZA65_RS12820	0.69	+0.3
2,748,637	+		DZA65_RS12820	0.70	+0.2
2,748,638	-		DZA65_RS12820	0.70	-0.1
2,748,638	-		DZA65_RS12820	0.70	-0.1
2,748,638	-		DZA65_RS12820	0.70	+0.2
2,748,638	-		DZA65_RS12820	0.70	-0.4
2,748,638	-		DZA65_RS12820	0.70	+1.5
2,748,638	-		DZA65_RS12820	0.70	+0.2
2,748,640	+		DZA65_RS12820	0.70	-0.1
2,748,640	+		DZA65_RS12820	0.70	-0.9
2,748,640	+		DZA65_RS12820	0.70	-0.0
2,748,648	+		DZA65_RS12820	0.70	+0.1
2,748,649	-		DZA65_RS12820	0.70	-1.3
2,748,649	-		DZA65_RS12820	0.70	-0.9
2,748,859	+		DZA65_RS12820	0.84	-0.7
2,748,859	+		DZA65_RS12820	0.84	-0.3
2,748,859	+		DZA65_RS12820	0.84	+0.2
2,748,859	+		DZA65_RS12820	0.84	+1.0
2,748,860	-		DZA65_RS12820	0.84	+0.3
2,748,860	-		DZA65_RS12820	0.84	+0.0
2,748,860	-		DZA65_RS12820	0.84	+0.2
2,749,010	-				-0.1
2,749,071	+				-0.9
2,749,071	+				+1.7
2,749,071	+				+0.4
2,749,071	+				+0.9
2,749,072	-				-0.5
2,749,106	+				+0.1
2,749,107	-				-0.1
2,749,339	+		DZA65_RS12825	0.46	-0.5
2,749,339	+		DZA65_RS12825	0.46	-2.1
2,749,340	-		DZA65_RS12825	0.46	-1.6
2,749,346	-		DZA65_RS12825	0.48	-1.0
2,749,346	-		DZA65_RS12825	0.48	-0.4
2,749,346	-		DZA65_RS12825	0.48	-0.3
2,749,346	-		DZA65_RS12825	0.48	-0.3
2,749,483	+				+0.6
2,749,483	+				-0.9
2,749,483	+				-0.6
2,749,483	+				-0.3
2,749,483	+				+0.7
2,749,484	-				-0.6
2,749,564	+				-0.3
2,749,565	-				-0.6
2,749,565	-				-0.0
2,749,565	-				-0.6
2,749,565	-				-0.7
2,749,570	+				+0.1
2,749,570	+				-1.1
2,749,570	+				-0.2
2,749,570	+				-0.7
2,749,571	-				-0.3
2,749,571	-				-0.0
2,749,574	+				+0.9
2,749,575	-				+1.1
2,749,575	-				-0.7
2,749,575	-				+0.3
2,749,579	+				-0.4
2,749,579	+				+1.4
2,749,580	-				+1.3
2,749,601	-				-0.5
2,749,613	+				-0.1
2,749,665	+				+0.2
2,749,665	+				-0.2
2,749,675	-				+0.1
2,749,675	-				-0.1
2,749,706	+				-0.4
2,749,707	-				+0.1
2,749,707	-				-0.1
2,749,708	+				+0.6
2,749,730	+				+1.4
2,749,770	+				+0.0
2,749,770	+				-0.0
2,749,778	+				-1.5
2,749,778	+				+0.6
2,749,778	+				-2.1
2,749,778	+				-0.7
2,749,778	+				+0.1
2,749,778	+				+0.5
2,749,778	+				+0.4
2,749,778	+				+0.3
2,749,779	-				-0.1
2,749,779	-				-0.1
2,749,779	-				+0.1
2,749,835	-				-2.1
2,749,835	-				-0.4
2,750,114	+		DZA65_RS12830	0.33	-1.5
2,750,114	+		DZA65_RS12830	0.33	+0.1
2,750,115	-		DZA65_RS12830	0.33	-0.7
2,750,115	-		DZA65_RS12830	0.33	-1.7
2,750,115	-		DZA65_RS12830	0.33	-0.5
2,750,115	-		DZA65_RS12830	0.33	-0.5
2,750,115	-		DZA65_RS12830	0.33	-1.3
2,750,115	-		DZA65_RS12830	0.33	+0.6
2,750,188	+		DZA65_RS12830	0.40	+0.5
2,750,189	-		DZA65_RS12830	0.40	-0.7
2,750,428	+		DZA65_RS12830	0.62	-0.3
2,750,464	+		DZA65_RS12830	0.66	-1.5
2,750,464	+		DZA65_RS12830	0.66	+0.4
2,750,464	+		DZA65_RS12830	0.66	+0.1
2,750,464	+		DZA65_RS12830	0.66	-0.2
2,750,464	+				-1.1
2,750,465	-		DZA65_RS12830	0.66	-0.7
2,750,465	-		DZA65_RS12830	0.66	+0.3
2,750,465	-		DZA65_RS12830	0.66	-0.2
2,750,465	-		DZA65_RS12830	0.66	-0.6