Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS12405

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,649,910	+		DZA65_RS12400	0.38	+0.4
2,649,911	-		DZA65_RS12400	0.38	-0.2
2,649,911	-		DZA65_RS12400	0.38	+1.2
2,649,911	-		DZA65_RS12400	0.38	-0.9
2,649,911	-		DZA65_RS12400	0.38	+0.1
2,649,911	-		DZA65_RS12400	0.38	-0.0
2,649,928	+		DZA65_RS12400	0.39	+0.4
2,649,928	+		DZA65_RS12400	0.39	-0.2
2,649,928	+		DZA65_RS12400	0.39	+0.8
2,649,928	+		DZA65_RS12400	0.39	+0.7
2,649,928	+		DZA65_RS12400	0.39	+0.8
2,649,929	-		DZA65_RS12400	0.39	-0.7
2,649,929	-		DZA65_RS12400	0.39	+0.5
2,649,929	-		DZA65_RS12400	0.39	+0.0
2,651,109	+		DZA65_RS12405	0.22	+0.3
2,651,109	+		DZA65_RS12405	0.22	-0.5
2,651,109	+		DZA65_RS12405	0.22	-0.2
2,651,109	+		DZA65_RS12405	0.22	+1.1
2,651,110	-		DZA65_RS12405	0.22	+0.5
2,651,110	-		DZA65_RS12405	0.22	-0.5
2,651,110	-		DZA65_RS12405	0.22	-0.2
2,651,110	-		DZA65_RS12405	0.22	-1.0
2,651,110	-		DZA65_RS12405	0.22	+0.2
2,651,212	+		DZA65_RS12405	0.30	+0.0
2,651,212	+		DZA65_RS12405	0.30	+0.4
2,651,212	+		DZA65_RS12405	0.30	-0.1
2,651,212	+		DZA65_RS12405	0.30	+0.0
2,651,212	+		DZA65_RS12405	0.30	-1.2
2,651,213	-		DZA65_RS12405	0.30	+0.1
2,651,213	-		DZA65_RS12405	0.30	+0.3
2,651,335	+		DZA65_RS12405	0.39	+0.5
2,651,336	-				+1.4
2,651,336	-		DZA65_RS12405	0.39	+1.1
2,651,336	-		DZA65_RS12405	0.39	-0.5
2,651,336	-		DZA65_RS12405	0.39	-0.2
2,651,336	-		DZA65_RS12405	0.39	-2.9
2,651,338	+		DZA65_RS12405	0.40	+0.4
2,651,338	+		DZA65_RS12405	0.40	-1.2
2,651,338	+		DZA65_RS12405	0.40	+1.3
2,651,339	-		DZA65_RS12405	0.40	+0.3
2,651,339	-		DZA65_RS12405	0.40	+0.3
2,651,546	+		DZA65_RS12405	0.56	-0.2
2,651,796	-		DZA65_RS12405	0.76	+0.3
2,651,848	+		DZA65_RS12405	0.80	-0.7
2,651,848	+		DZA65_RS12405	0.80	+0.6
2,651,848	+		DZA65_RS12405	0.80	+0.2
2,651,848	+		DZA65_RS12405	0.80	+0.4
2,651,848	+		DZA65_RS12405	0.80	+0.6
2,651,848	+		DZA65_RS12405	0.80	-0.4
2,651,848	+		DZA65_RS12405	0.80	+0.2
2,651,848	+		DZA65_RS12405	0.80	+0.7
2,651,848	+		DZA65_RS12405	0.80	-0.4
2,651,849	-		DZA65_RS12405	0.80	-2.2
2,651,849	-		DZA65_RS12405	0.80	-0.4
2,651,849	-		DZA65_RS12405	0.80	-0.0
2,651,976	-				+0.2
2,651,976	-				+0.8
2,651,978	-				-0.6
2,651,978	-				-0.2
2,651,978	-				+0.4
2,651,978	-				+0.3
2,652,096	-				-1.2
2,652,096	-				-0.5
2,652,096	-				-0.2
2,652,150	+				-1.0
2,652,167	+				+1.0
2,652,167	+				+0.3
2,652,167	+				+0.3
2,652,168	-				-1.6
2,652,171	+				-1.7
2,652,172	-				-0.4
2,652,172	-				-0.6
2,652,188	+				-0.4
2,652,190	+				+0.0
2,652,191	-				-0.4
2,652,250	+				+0.3
2,652,251	-				+1.3
2,652,304	-				-0.6
2,652,404	+		DZA65_RS12410	0.12	+0.2
2,652,405	-		DZA65_RS12410	0.12	-0.1
2,652,444	+		DZA65_RS12410	0.15	+0.2
2,652,444	+		DZA65_RS12410	0.15	-0.3
2,652,444	+		DZA65_RS12410	0.15	-1.3
2,652,444	+		DZA65_RS12410	0.15	+2.0
2,652,444	+		DZA65_RS12410	0.15	-1.0
2,652,445	-		DZA65_RS12410	0.15	-0.7
2,652,445	-		DZA65_RS12410	0.15	+0.2
2,652,445	-		DZA65_RS12410	0.15	-0.9
2,652,445	-		DZA65_RS12410	0.15	-0.2
2,652,474	+		DZA65_RS12410	0.17	+0.6
2,652,474	+		DZA65_RS12410	0.17	+0.6
2,652,474	+		DZA65_RS12410	0.17	+0.8
2,652,474	+		DZA65_RS12410	0.17	-0.7
2,652,474	+		DZA65_RS12410	0.17	-0.7
2,652,474	+		DZA65_RS12410	0.17	-0.2
2,652,475	-		DZA65_RS12410	0.17	+0.4
2,652,475	-		DZA65_RS12410	0.17	+0.2
2,652,475	-		DZA65_RS12410	0.17	+0.0
2,652,475	-		DZA65_RS12410	0.17	-1.3
2,652,475	-		DZA65_RS12410	0.17	-0.2
2,652,524	+		DZA65_RS12410	0.20	+0.3
2,652,720	+		DZA65_RS12410	0.33	-0.2
2,652,720	+		DZA65_RS12410	0.33	-0.7
2,652,768	+		DZA65_RS12410	0.36	+0.3
2,652,769	-		DZA65_RS12410	0.36	-0.1
2,652,798	-		DZA65_RS12410	0.38	-0.0
2,652,798	-		DZA65_RS12410	0.38	-0.6
2,652,866	+		DZA65_RS12410	0.43	-0.3
2,652,866	+		DZA65_RS12410	0.43	+0.1