Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS11355

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,414,611	+		DZA65_RS11350	0.64	+0.8
2,414,611	+		DZA65_RS11350	0.64	+0.5
2,414,612	-		DZA65_RS11350	0.64	+0.2
2,414,623	+		DZA65_RS11350	0.64	+0.3
2,414,874	+		DZA65_RS11350	0.77	-0.6
2,414,874	+		DZA65_RS11350	0.77	+0.8
2,414,874	+		DZA65_RS11350	0.77	-2.3
2,414,875	-		DZA65_RS11350	0.77	-0.4
2,414,875	-		DZA65_RS11350	0.77	-0.2
2,414,875	-		DZA65_RS11350	0.77	-1.6
2,414,875	-		DZA65_RS11350	0.77	+1.3
2,414,875	-		DZA65_RS11350	0.77	+0.1
2,415,047	+		DZA65_RS11350	0.86	+0.3
2,415,047	+		DZA65_RS11350	0.86	+0.3
2,415,047	+		DZA65_RS11350	0.86	-0.8
2,415,048	-		DZA65_RS11350	0.86	-0.5
2,415,048	-		DZA65_RS11350	0.86	-0.8
2,415,048	-		DZA65_RS11350	0.86	-0.5
2,415,048	-		DZA65_RS11350	0.86	+1.4
2,415,048	-		DZA65_RS11350	0.86	+0.2
2,415,048	-		DZA65_RS11350	0.86	-0.6
2,415,154	-				+1.7
2,415,154	-				-0.5
2,415,214	-				-0.3
2,415,265	-				-0.9
2,415,265	-				-1.4
2,415,265	-				-0.3
2,415,287	+				-0.6
2,415,288	-				-0.6
2,415,288	-				-2.5
2,415,288	-				+0.2
2,415,291	+				-0.5
2,415,291	+				+0.3
2,415,292	-				-0.6
2,415,292	-				+0.8
2,415,292	-				-0.3
2,415,377	-				-0.5
2,415,400	+				-0.0
2,415,401	-				-1.5
2,415,420	+				-0.3
2,415,444	+				-1.2
2,415,445	-				+1.0
2,415,454	+				-0.2
2,415,457	+				+0.5
2,415,457	+				-1.3
2,415,458	-				-1.5
2,415,458	-				+1.8
2,415,458	-				-0.7
2,415,490	-				+0.8
2,415,490	-				-0.8
2,415,515	-				+0.8
2,415,536	+				-1.2
2,415,547	+				-0.9
2,415,547	+				-0.2
2,415,571	-		DZA65_RS11355	0.13	+0.0
2,415,578	+		DZA65_RS11355	0.14	-0.6
2,415,579	-				-0.2
2,415,600	+		DZA65_RS11355	0.18	+0.2
2,415,600	+		DZA65_RS11355	0.18	+1.6
2,415,613	+		DZA65_RS11355	0.21	-0.2
2,415,669	-		DZA65_RS11355	0.31	+1.1
2,415,693	-		DZA65_RS11355	0.36	+0.4
2,415,705	+		DZA65_RS11355	0.38	+0.7
2,415,705	+		DZA65_RS11355	0.38	-0.8
2,415,725	+		DZA65_RS11355	0.41	+0.4
2,415,726	-		DZA65_RS11355	0.42	-1.3
2,415,797	+		DZA65_RS11355	0.55	+1.5
2,415,797	+		DZA65_RS11355	0.55	-0.4
2,415,797	+		DZA65_RS11355	0.55	+0.5
2,415,798	-		DZA65_RS11355	0.55	+1.0
2,415,800	-				+2.4
2,415,800	-				+0.1
2,415,800	-		DZA65_RS11355	0.55	-0.4
2,415,823	-		DZA65_RS11355	0.60	-1.7
2,415,902	+		DZA65_RS11355	0.74	-0.2
2,415,985	+		DZA65_RS11355	0.90	+1.4
2,415,986	-		DZA65_RS11355	0.90	+0.7
2,415,988	+				-0.9
2,416,002	+				-0.7
2,416,002	+				+0.2
2,416,003	-				+1.4
2,416,003	-				-0.1
2,416,029	-				+0.8
2,416,029	-				-0.7
2,416,038	+				+0.2
2,416,039	-				+0.1
2,416,039	-				-0.0
2,416,039	-				-0.5
2,416,043	+				+0.4
2,416,095	-				+0.6
2,416,095	-				-1.3
2,416,098	-				-0.5
2,416,101	-				-0.3
2,416,101	-				+1.6
2,416,110	-				-1.1
2,416,113	+				+0.4
2,416,113	+				-0.8
2,416,114	-				+0.1
2,416,114	-				+0.0
2,416,132	+				+1.0
2,416,132	+				+0.2
2,416,132	+				-1.5
2,416,132	+				+1.0
2,416,133	-				-0.2
2,416,133	-				-0.2
2,416,133	-				-0.3
2,416,142	+				+0.0
2,416,143	-				-0.2
2,416,154	+				+0.2
2,416,154	+				+1.8
2,416,177	+				-0.4
2,416,195	+				+0.0
2,416,202	+				-0.4
2,416,222	+				+1.2
2,416,298	+		DZA65_RS11360	0.13	+1.2
2,416,298	+		DZA65_RS11360	0.13	+0.3
2,416,376	-		DZA65_RS11360	0.23	+0.4
2,416,408	-		DZA65_RS11360	0.27	+0.3
2,416,437	+		DZA65_RS11360	0.31	+1.2
2,416,437	+		DZA65_RS11360	0.31	+0.6
2,416,438	-		DZA65_RS11360	0.31	+0.8
2,416,438	-		DZA65_RS11360	0.31	-0.0
2,416,559	+		DZA65_RS11360	0.47	-0.3
2,416,559	+		DZA65_RS11360	0.47	-0.4
2,416,559	+				-0.5
2,416,560	-		DZA65_RS11360	0.47	-0.8
2,416,560	-		DZA65_RS11360	0.47	-0.9
2,416,560	-		DZA65_RS11360	0.47	-0.5
2,416,560	-		DZA65_RS11360	0.47	+0.8
2,416,560	-		DZA65_RS11360	0.47	-0.9
2,416,560	-		DZA65_RS11360	0.47	-0.2
2,416,725	+		DZA65_RS11360	0.69	+1.6
2,416,725	+		DZA65_RS11360	0.69	-0.2
2,416,725	+		DZA65_RS11360	0.69	+0.7
2,416,725	+		DZA65_RS11360	0.69	-0.2
2,416,725	+		DZA65_RS11360	0.69	-0.3
2,416,725	+		DZA65_RS11360	0.69	-0.8
2,416,809	+		DZA65_RS11360	0.80	+0.4
2,416,809	+		DZA65_RS11360	0.80	-1.0
2,416,890	+				+0.1
2,416,890	+				-1.0
2,416,890	+				+0.7
2,416,890	+				-0.6
2,416,890	+				+0.3
2,416,890	+				+1.2
2,416,890	+				+0.8
2,416,891	-				-0.6
2,416,891	-				-0.5
2,416,891	-				-0.5
2,416,891	-				-0.4
2,416,891	-				+1.6
2,416,891	-				-0.5
2,416,946	+				+1.3
2,416,947	-				+1.4
2,416,953	+				+1.2
2,416,954	-				+0.6
2,416,995	+				+0.3
2,416,995	+				-2.0