Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS10530

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,232,056	+		DZA65_RS10520	0.84	-1.3
2,232,129	+				+0.8
2,232,129	+				-0.5
2,232,130	-				+0.3
2,232,130	-				-0.3
2,232,162	-				-0.3
2,232,178	-				-0.0
2,232,193	-				-0.6
2,232,206	+				+0.1
2,232,206	+				+0.3
2,232,220	-				-0.3
2,232,330	-				-0.7
2,232,330	-				-1.6
2,232,330	-				-0.2
2,232,331	+				-1.0
2,232,332	-				+0.2
2,232,379	+				+1.0
2,232,379	+				-1.9
2,232,380	-				-1.0
2,232,380	-				-1.2
2,232,380	-				+0.2
2,232,380	-				+0.3
2,232,381	+				+0.5
2,232,381	+				-0.2
2,232,382	-				+0.2
2,232,382	-				+0.1
2,232,382	-				+0.6
2,232,386	+				+0.8
2,232,386	+				+0.5
2,232,386	+				-0.5
2,232,386	+				-0.2
2,232,386	+				+0.4
2,232,387	-				-0.1
2,232,514	+		DZA65_RS10525	0.14	-1.3
2,233,045	+				-0.6
2,233,045	+				-0.1
2,233,045	+				-0.3
2,233,045	+				+0.8
2,233,045	+				-0.2
2,233,045	+				-0.5
2,233,049	+				-0.6
2,233,049	+				-2.9
2,233,049	+				-0.3
2,233,049	+				-0.2
2,233,049	+				-1.2
2,233,049	+				+0.4
2,233,049	+				+0.4
2,233,049	+				-0.1
2,233,049	+				-0.7
2,233,049	+				+0.4
2,233,049	+				-0.2
2,233,049	+				-0.4
2,234,053	-				-0.2
2,234,053	-				+0.3
2,234,055	+				+0.1
2,234,055	+				-0.3
2,234,055	+				+1.5
2,234,056	-				+0.2
2,234,056	-				+0.4
2,234,056	-				-0.0
2,234,056	-				-0.2
2,234,136	-				+0.3
2,234,144	+				+2.2
2,234,150	+				-0.4
2,234,150	+				-0.7
2,234,151	-				-0.1
2,234,166	-				+0.5
2,234,182	+				+0.1
2,234,182	+				+0.5
2,234,183	-				+0.6
2,234,187	-				-0.4
2,234,187	-				-0.2
2,234,187	-				-1.2
2,234,187	-				+1.0
2,234,187	-				-0.6
2,234,187	-				-0.1
2,234,187	-				-1.0
2,234,187	-				-0.2
2,234,195	+				+0.3
2,234,196	-				-0.6
2,234,196	-				-0.4
2,234,196	-				-0.2
2,234,199	+				-0.6
2,234,199	+				-0.4
2,234,199	+				+0.5
2,234,199	+				-0.3
2,234,200	-				-2.1
2,234,200	-				-0.4
2,234,200	-				-0.8
2,234,200	-				-0.9
2,234,200	-				+0.2
2,234,233	+				+0.7
2,234,233	+				-1.2
2,234,233	+				+0.5
2,234,234	-				-0.1
2,234,234	-				+0.4
2,234,234	-				-0.7
2,234,234	-				-0.4
2,234,237	+				-0.6
2,234,250	+				-1.6
2,234,250	+				-0.3
2,234,250	+				-0.0
2,234,250	+				+0.2
2,234,250	+				+0.4
2,234,250	+				+0.3
2,234,250	+				-0.9
2,234,250	+				-2.0
2,234,251	-				+1.8
2,234,251	-				-0.7
2,234,251	-				+0.6
2,234,251	-				-0.6
2,234,251	-				-0.5
2,234,251	-				+1.1
2,234,251	-				-0.6
2,234,251	-				+0.8
2,234,292	+				-0.2
2,234,292	+				-1.2
2,234,293	-				+2.0
2,234,293	-				+0.0
2,234,311	+				-0.6
2,234,311	+				-0.0
2,234,311	+				+0.0
2,234,311	+				+0.1
2,234,311	+				+0.3
2,234,311	+				+0.4
2,234,311	+				-0.2
2,234,311	+				+0.1
2,234,312	-				-0.8
2,234,312	-				+0.6
2,234,312	-				-0.3
2,234,312	-				-0.7
2,234,338	-				-2.5
2,234,338	-				-0.1
2,234,454	+		DZA65_RS10535	0.25	+0.8
2,234,454	+		DZA65_RS10535	0.25	+0.4
2,234,454	+		DZA65_RS10535	0.25	+0.4
2,234,455	-		DZA65_RS10535	0.25	+0.6
2,234,596	-		DZA65_RS10535	0.43	-0.0
2,234,596	-		DZA65_RS10535	0.43	-0.2
2,234,596	-		DZA65_RS10535	0.43	+0.8
2,234,596	-		DZA65_RS10535	0.43	-0.0
2,234,705	+		DZA65_RS10535	0.57	-0.7
2,234,873	+		DZA65_RS10535	0.78	-1.5
2,234,873	+		DZA65_RS10535	0.78	+0.2
2,234,873	+		DZA65_RS10535	0.78	-0.9
2,234,874	-		DZA65_RS10535	0.78	-0.8
2,234,874	-		DZA65_RS10535	0.78	+0.8
2,234,917	+		DZA65_RS10535	0.84	+0.1
2,234,917	+		DZA65_RS10535	0.84	-2.2
2,234,917	+		DZA65_RS10535	0.84	+0.5
2,234,918	-		DZA65_RS10535	0.84	+0.0
2,234,948	+		DZA65_RS10535	0.88	-2.7
2,234,948	+		DZA65_RS10535	0.88	-0.2
2,234,949	-		DZA65_RS10535	0.88	+0.6
2,234,955	+		DZA65_RS10535	0.88	-0.2
2,234,955	+		DZA65_RS10535	0.88	-0.4
2,234,955	+		DZA65_RS10535	0.88	-1.4
2,234,955	+		DZA65_RS10535	0.88	+0.4
2,234,955	+		DZA65_RS10535	0.88	+1.4
2,234,955	+		DZA65_RS10535	0.88	+0.3
2,234,956	-		DZA65_RS10535	0.89	-1.9
2,234,956	-		DZA65_RS10535	0.89	-0.4
2,234,956	-		DZA65_RS10535	0.89	+0.1
2,234,956	-		DZA65_RS10535	0.89	-0.3
2,235,053	+				-1.5