Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09895

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,086,316	+		DZA65_RS09885	0.85	-0.2
2,086,317	-		DZA65_RS09885	0.85	+1.3
2,086,370	+		DZA65_RS09885	0.87	-0.9
2,086,371	-		DZA65_RS09885	0.87	-0.2
2,086,526	+				+0.9
2,086,526	+				-0.5
2,086,534	+				-0.3
2,086,534	+				-0.3
2,086,534	+				+0.7
2,086,534	+				-0.2
2,086,534	+				+1.3
2,086,534	+				-1.0
2,086,534	+				-1.3
2,086,535	-				-0.5
2,086,535	-				-2.2
2,086,535	-				+0.3
2,086,535	-				+0.0
2,086,535	-				-2.0
2,086,535	-				-1.0
2,086,535	-				+0.0
2,086,658	+				-1.3
2,086,658	+				+0.3
2,086,659	-				+0.6
2,086,659	-				+0.1
2,086,659	-				-1.2
2,086,671	+				-0.5
2,086,671	+				-0.9
2,086,672	-				+0.4
2,086,672	-				-0.9
2,086,693	+				-0.1
2,086,694	-				+0.5
2,086,697	+				-1.0
2,086,698	-				-0.2
2,086,698	-				+1.0
2,086,698	-				+0.1
2,086,698	-				-0.9
2,086,698	-				+0.2
2,086,831	+				-0.3
2,086,832	-				-1.2
2,086,832	-				+1.2
2,086,834	+				-1.1
2,086,834	+				-1.5
2,086,834	+				-2.0
2,086,835	-				-1.7
2,086,835	-				-0.7
2,086,835	-				+0.1
2,086,835	-				-1.0
2,086,838	+				-0.2
2,086,838	+				-2.2
2,086,838	+				-1.2
2,086,838	+				+1.3
2,086,839	-				-0.2
2,086,843	-				-0.7
2,086,847	+				+0.4
2,086,853	+				-0.2
2,086,900	+				-1.4
2,087,175	-				-0.2
2,087,237	-				-0.4
2,087,237	-				-0.0
2,087,255	+				+0.4
2,087,256	-				-0.2
2,087,256	-				-0.1
2,087,256	-				-0.4
2,087,256	-				-0.0
2,087,322	+				+1.1
2,087,323	-		DZA65_RS09895	0.10	-1.5
2,087,323	-		DZA65_RS09895	0.10	-0.2
2,087,355	+		DZA65_RS09895	0.14	-1.1
2,087,355	+		DZA65_RS09895	0.14	-0.3
2,087,355	+		DZA65_RS09895	0.14	-1.2
2,087,399	+		DZA65_RS09895	0.20	-1.7
2,087,412	+		DZA65_RS09895	0.22	+0.1
2,087,412	+		DZA65_RS09895	0.22	-1.4
2,087,412	+		DZA65_RS09895	0.22	+0.8
2,087,476	+		DZA65_RS09895	0.31	-0.9
2,087,476	+		DZA65_RS09895	0.31	-0.7
2,087,476	+		DZA65_RS09895	0.31	-0.3
2,087,477	-		DZA65_RS09895	0.31	-1.0
2,087,489	+		DZA65_RS09895	0.33	-2.1
2,087,540	+		DZA65_RS09895	0.40	+0.4
2,087,545	+		DZA65_RS09895	0.40	-1.5
2,087,545	+		DZA65_RS09895	0.40	-0.7
2,087,545	+		DZA65_RS09895	0.40	-0.0
2,087,545	+		DZA65_RS09895	0.40	-1.4
2,087,545	+		DZA65_RS09895	0.40	-0.7
2,087,545	+		DZA65_RS09895	0.40	+0.3
2,087,545	+		DZA65_RS09895	0.40	+0.0
2,087,545	+		DZA65_RS09895	0.40	-0.4
2,087,545	+		DZA65_RS09895	0.40	+0.8
2,087,545	+		DZA65_RS09895	0.40	-2.0
2,087,545	+		DZA65_RS09895	0.40	-0.6
2,087,546	-		DZA65_RS09895	0.41	-0.4
2,087,546	-		DZA65_RS09895	0.41	+0.7
2,087,546	-		DZA65_RS09895	0.41	+0.2
2,087,546	-		DZA65_RS09895	0.41	-0.9
2,087,546	-		DZA65_RS09895	0.41	-0.4
2,087,546	-		DZA65_RS09895	0.41	-0.4
2,087,546	-		DZA65_RS09895	0.41	-0.2
2,087,546	-		DZA65_RS09895	0.41	-0.7
2,087,618	+		DZA65_RS09895	0.50	+0.8
2,087,618	+		DZA65_RS09895	0.50	-2.3
2,087,618	+		DZA65_RS09895	0.50	-1.6
2,087,618	+		DZA65_RS09895	0.50	+0.3
2,087,619	-		DZA65_RS09895	0.51	-2.0
2,087,619	-		DZA65_RS09895	0.51	-0.6
2,087,620	+		DZA65_RS09895	0.51	-1.3
2,087,620	+		DZA65_RS09895	0.51	-0.5
2,087,620	+		DZA65_RS09895	0.51	-0.2
2,087,620	+		DZA65_RS09895	0.51	-0.7
2,087,620	+		DZA65_RS09895	0.51	-0.2
2,087,621	-		DZA65_RS09895	0.51	-0.0
2,087,621	-		DZA65_RS09895	0.51	+0.0
2,087,621	-		DZA65_RS09895	0.51	-0.7
2,087,621	-		DZA65_RS09895	0.51	+0.0
2,087,621	-		DZA65_RS09895	0.51	+0.2
2,087,863	-		DZA65_RS09895	0.84	-0.2
2,087,863	-		DZA65_RS09895	0.84	-0.1
2,087,968	+				-0.0
2,087,968	+				+0.1
2,087,968	+				-0.5
2,087,969	-				+0.8
2,087,969	-				-0.7
2,087,969	-				-0.0
2,087,978	+				-1.3
2,087,979	-				-1.1
2,087,979	-				-1.2
2,088,056	+				-0.3