Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09595

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,016,738	+		DZA65_RS09590	0.16	+0.1
2,016,738	+		DZA65_RS09590	0.16	-1.8
2,016,739	-		DZA65_RS09590	0.16	+0.0
2,016,739	-		DZA65_RS09590	0.16	+0.6
2,016,797	+		DZA65_RS09590	0.23	-0.1
2,016,878	+		DZA65_RS09590	0.32	+0.4
2,016,878	+		DZA65_RS09590	0.32	-1.6
2,016,879	-		DZA65_RS09590	0.32	+0.3
2,016,879	-		DZA65_RS09590	0.32	-0.2
2,016,879	-		DZA65_RS09590	0.32	-1.5
2,016,879	-		DZA65_RS09590	0.32	-0.2
2,016,879	-		DZA65_RS09590	0.32	+0.2
2,016,879	-		DZA65_RS09590	0.32	+0.5
2,016,889	+		DZA65_RS09590	0.33	-1.4
2,016,889	+		DZA65_RS09590	0.33	+0.1
2,016,903	-		DZA65_RS09590	0.35	-0.3
2,016,903	-		DZA65_RS09590	0.35	-1.1
2,016,965	+		DZA65_RS09590	0.42	-0.5
2,016,965	+		DZA65_RS09590	0.42	-0.7
2,016,965	+		DZA65_RS09590	0.42	-0.4
2,016,965	+		DZA65_RS09590	0.42	-0.5
2,016,965	+		DZA65_RS09590	0.42	-0.9
2,016,965	+		DZA65_RS09590	0.42	+1.3
2,016,965	+		DZA65_RS09590	0.42	-1.1
2,016,966	-				+0.3
2,016,966	-		DZA65_RS09590	0.42	-0.6
2,016,966	-		DZA65_RS09590	0.42	-0.0
2,016,966	-		DZA65_RS09590	0.42	-0.1
2,016,976	+		DZA65_RS09590	0.43	-1.3
2,016,976	+		DZA65_RS09590	0.43	-0.3
2,016,976	+		DZA65_RS09590	0.43	-0.0
2,017,387	+		DZA65_RS09590	0.90	-1.3
2,017,388	-		DZA65_RS09590	0.90	-1.4
2,017,388	-		DZA65_RS09590	0.90	+0.9
2,017,388	-		DZA65_RS09590	0.90	+0.6
2,017,394	+				-0.5
2,017,394	+				+1.2
2,017,394	+				-0.4
2,017,394	+				-0.3
2,017,395	-				-0.9
2,017,395	-				-0.8
2,017,472	-				-1.4
2,017,472	-				-0.3
2,017,472	-				-0.0
2,017,475	+				+0.2
2,017,475	+				-0.2
2,017,476	-				-0.6
2,017,476	-				+0.3
2,017,476	-				-0.1
2,017,531	+				+1.0
2,017,531	+				+0.4
2,017,531	+				-0.1
2,017,532	-				-0.1
2,017,548	+				+1.3
2,017,548	+				-1.6
2,017,549	-				+1.4
2,017,561	+				-2.5
2,017,561	+				-0.2
2,017,561	+				+0.8
2,017,561	+				+0.6
2,017,562	-				+0.2
2,017,562	-				-0.6
2,017,562	-				+0.9
2,017,562	-				-2.1
2,017,562	-				+2.3
2,017,562	-				-0.2
2,017,563	+				-0.9
2,017,564	-				-0.0
2,017,603	+				-1.1
2,017,603	+				-0.7
2,017,604	-				-1.6
2,017,604	-				+0.0
2,017,639	+				-0.4
2,017,639	+				+0.1
2,017,640	-				-0.2
2,017,836	+		DZA65_RS09595	0.13	-0.3
2,017,837	-		DZA65_RS09595	0.13	-1.1
2,017,903	-		DZA65_RS09595	0.18	-2.1
2,017,914	+		DZA65_RS09595	0.19	-0.2
2,017,915	-		DZA65_RS09595	0.19	-0.4
2,017,915	-		DZA65_RS09595	0.19	-0.6
2,017,953	+				+0.3
2,017,953	+		DZA65_RS09595	0.21	-0.7
2,017,954	-		DZA65_RS09595	0.21	-1.8
2,017,954	-		DZA65_RS09595	0.21	-1.2
2,017,954	-		DZA65_RS09595	0.21	-0.8
2,017,954	-		DZA65_RS09595	0.21	-1.1
2,017,960	-		DZA65_RS09595	0.22	-1.9
2,017,960	-		DZA65_RS09595	0.22	-0.5
2,017,960	-		DZA65_RS09595	0.22	+0.9
2,018,085	+		DZA65_RS09595	0.30	-0.6
2,018,085	+		DZA65_RS09595	0.30	-0.4
2,018,085	+		DZA65_RS09595	0.30	-0.6
2,018,085	+		DZA65_RS09595	0.30	-0.5
2,018,085	+		DZA65_RS09595	0.30	+0.0
2,018,085	+		DZA65_RS09595	0.30	-0.1
2,018,086	-		DZA65_RS09595	0.30	+0.5
2,018,086	-		DZA65_RS09595	0.30	+0.1
2,018,086	-		DZA65_RS09595	0.30	+0.9
2,018,151	-		DZA65_RS09595	0.35	-1.7
2,018,151	-		DZA65_RS09595	0.35	+0.2
2,018,194	+		DZA65_RS09595	0.38	+0.5
2,018,222	+		DZA65_RS09595	0.39	+0.5
2,018,222	+		DZA65_RS09595	0.39	+1.1
2,018,222	+		DZA65_RS09595	0.39	+0.9
2,018,223	-		DZA65_RS09595	0.40	+2.4
2,018,223	-		DZA65_RS09595	0.40	-0.7
2,018,357	+		DZA65_RS09595	0.49	+0.7
2,018,357	+		DZA65_RS09595	0.49	-1.2
2,018,357	+		DZA65_RS09595	0.49	+0.0
2,018,358	-		DZA65_RS09595	0.49	-0.9
2,018,358	-		DZA65_RS09595	0.49	+0.2
2,018,358	-		DZA65_RS09595	0.49	-0.1
2,018,358	-		DZA65_RS09595	0.49	-0.4
2,018,406	+		DZA65_RS09595	0.52	-1.3
2,018,406	+		DZA65_RS09595	0.52	-2.5
2,018,406	+		DZA65_RS09595	0.52	-0.2
2,018,406	+		DZA65_RS09595	0.52	-0.1
2,018,408	+		DZA65_RS09595	0.52	-2.9
2,018,409	-		DZA65_RS09595	0.52	+0.3
2,018,445	+		DZA65_RS09595	0.55	-1.2
2,018,445	+		DZA65_RS09595	0.55	-0.9
2,018,598	+		DZA65_RS09595	0.65	+0.5
2,018,598	+		DZA65_RS09595	0.65	-0.5
2,018,598	+		DZA65_RS09595	0.65	+0.4
2,018,598	+		DZA65_RS09595	0.65	-0.7
2,018,598	+		DZA65_RS09595	0.65	+0.6
2,018,598	+		DZA65_RS09595	0.65	+0.3
2,018,598	+		DZA65_RS09595	0.65	-2.6
2,018,599	-		DZA65_RS09595	0.65	-0.4
2,018,599	-		DZA65_RS09595	0.65	+3.0
2,018,599	-				-0.7
2,018,599	-		DZA65_RS09595	0.65	-0.4
2,018,599	-		DZA65_RS09595	0.65	-0.3
2,018,599	-		DZA65_RS09595	0.65	-0.2
2,018,599	-		DZA65_RS09595	0.65	-1.9
2,018,599	-		DZA65_RS09595	0.65	-0.7
2,018,599	-		DZA65_RS09595	0.65	-1.5
2,018,599	-		DZA65_RS09595	0.65	+0.2
2,018,599	-		DZA65_RS09595	0.65	-0.8
2,018,599	-		DZA65_RS09595	0.65	-1.1
2,018,599	-		DZA65_RS09595	0.65	-0.5
2,018,622	-		DZA65_RS09595	0.67	+0.7
2,018,622	-		DZA65_RS09595	0.67	-0.2
2,018,697	+		DZA65_RS09595	0.72	+0.9
2,018,697	+		DZA65_RS09595	0.72	-1.8
2,018,697	+		DZA65_RS09595	0.72	-1.6
2,018,698	-		DZA65_RS09595	0.72	-1.0
2,018,698	-		DZA65_RS09595	0.72	-0.1
2,018,698	-		DZA65_RS09595	0.72	-0.4
2,018,760	+		DZA65_RS09595	0.76	-0.5
2,018,761	-		DZA65_RS09595	0.76	-1.0
2,018,761	-		DZA65_RS09595	0.76	+0.1
2,018,761	-		DZA65_RS09595	0.76	-1.1
2,018,777	+		DZA65_RS09595	0.77	-0.1
2,018,777	+		DZA65_RS09595	0.77	-0.4
2,018,778	-		DZA65_RS09595	0.77	+0.9
2,018,847	+		DZA65_RS09595	0.82	-0.2
2,018,847	+		DZA65_RS09595	0.82	-1.2
2,018,848	-		DZA65_RS09595	0.82	+0.3
2,018,848	-		DZA65_RS09595	0.82	-0.2
2,018,940	-		DZA65_RS09595	0.88	-0.5
2,018,959	-		DZA65_RS09595	0.89	-0.9
2,019,009	+				-0.6
2,019,009	+				+0.6
2,019,009	+				-0.3
2,019,009	+				+0.0
2,019,009	+				+0.4
2,019,009	+				-0.2
2,019,009	+				-0.4
2,019,010	-				+0.3
2,019,010	-				+0.2
2,019,010	-				-0.8
2,019,077	-				+0.9
2,019,077	-				+0.2
2,019,081	+				-0.9
2,019,082	-				+0.6
2,019,107	+				-0.2
2,019,107	+				+0.2
2,019,107	+				+0.6
2,019,108	-				-1.4
2,019,111	+				-0.7
2,019,175	+				-0.2
2,019,229	-				+0.9
2,019,283	-				-1.5
2,019,326	+		DZA65_RS09600	0.11	-0.9
2,019,327	-		DZA65_RS09600	0.11	-1.4
2,019,413	+		DZA65_RS09600	0.18	+0.2
2,019,413	+		DZA65_RS09600	0.18	-0.5
2,019,414	-		DZA65_RS09600	0.19	+1.0
2,019,414	-		DZA65_RS09600	0.19	-0.4
2,019,588	+		DZA65_RS09600	0.33	-0.1
2,019,589	-		DZA65_RS09600	0.33	-0.5
2,019,596	-		DZA65_RS09600	0.34	-0.2
2,019,596	-		DZA65_RS09600	0.34	+0.1
2,019,688	+		DZA65_RS09600	0.42	+0.2
2,019,688	+		DZA65_RS09600	0.42	+0.1
2,019,688	+		DZA65_RS09600	0.42	-0.5
2,019,690	+		DZA65_RS09600	0.42	-0.8
2,019,690	+		DZA65_RS09600	0.42	+0.9
2,019,690	+		DZA65_RS09600	0.42	+0.4
2,019,690	+		DZA65_RS09600	0.42	-1.3
2,019,690	+		DZA65_RS09600	0.42	+0.3
2,019,690	+		DZA65_RS09600	0.42	-0.9
2,019,690	+		DZA65_RS09600	0.42	+0.2
2,019,691	-		DZA65_RS09600	0.42	-0.0
2,019,691	-		DZA65_RS09600	0.42	+0.1
2,019,691	-		DZA65_RS09600	0.42	+1.2
2,019,691	-		DZA65_RS09600	0.42	-0.6
2,019,691	-		DZA65_RS09600	0.42	+0.1
2,019,691	-		DZA65_RS09600	0.42	-0.3
2,019,691	-		DZA65_RS09600	0.42	-0.5
2,019,691	-		DZA65_RS09600	0.42	-0.5
2,019,691	-		DZA65_RS09600	0.42	-1.5
2,019,696	+		DZA65_RS09600	0.42	+0.1
2,019,697	-		DZA65_RS09600	0.42	-1.6
2,019,723	-		DZA65_RS09600	0.45	+1.4
2,019,738	+		DZA65_RS09600	0.46	-0.1
2,019,738	+		DZA65_RS09600	0.46	-0.3
2,019,738	+		DZA65_RS09600	0.46	-1.1
2,019,738	+		DZA65_RS09600	0.46	-0.7
2,019,739	-		DZA65_RS09600	0.46	-0.0
2,019,894	+		DZA65_RS09600	0.59	+1.2
2,019,894	+		DZA65_RS09600	0.59	+0.1
2,019,895	-		DZA65_RS09600	0.59	+0.4
2,019,895	-		DZA65_RS09600	0.59	+1.4
2,019,895	-		DZA65_RS09600	0.59	-0.6
2,019,929	+		DZA65_RS09600	0.62	-1.9
2,020,067	-		DZA65_RS09600	0.73	+0.6
2,020,078	+		DZA65_RS09600	0.74	-1.9