Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS09215

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,944,442	+		DZA65_RS09210	0.35	-0.7
1,944,443	-		DZA65_RS09210	0.36	-1.1
1,944,521	+		DZA65_RS09210	0.44	-1.9
1,944,521	+		DZA65_RS09210	0.44	+0.4
1,944,521	+		DZA65_RS09210	0.44	-0.9
1,944,521	+		DZA65_RS09210	0.44	+0.0
1,944,521	+		DZA65_RS09210	0.44	-0.3
1,944,521	+		DZA65_RS09210	0.44	+0.9
1,944,522	-		DZA65_RS09210	0.45	+0.9
1,944,522	-		DZA65_RS09210	0.45	-1.1
1,944,522	-		DZA65_RS09210	0.45	-1.7
1,944,522	-		DZA65_RS09210	0.45	-0.2
1,944,522	-		DZA65_RS09210	0.45	-0.9
1,944,522	-		DZA65_RS09210	0.45	+0.2
1,944,522	-		DZA65_RS09210	0.45	+0.1
1,944,522	-		DZA65_RS09210	0.45	-0.3
1,944,524	-		DZA65_RS09210	0.45	+0.1
1,944,524	-		DZA65_RS09210	0.45	-0.5
1,944,581	+		DZA65_RS09210	0.51	-0.9
1,944,754	+				-1.1
1,944,754	+		DZA65_RS09210	0.71	+1.4
1,944,754	+		DZA65_RS09210	0.71	+1.0
1,944,754	+		DZA65_RS09210	0.71	-0.7
1,944,755	-		DZA65_RS09210	0.71	+0.3
1,944,755	-		DZA65_RS09210	0.71	-0.9
1,944,755	-		DZA65_RS09210	0.71	-0.4
1,944,755	-		DZA65_RS09210	0.71	+0.7
1,944,755	-		DZA65_RS09210	0.71	-0.7
1,944,782	-		DZA65_RS09210	0.74	+0.1
1,944,859	-		DZA65_RS09210	0.83	+0.0
1,944,966	+				-1.3
1,944,967	-				-1.1
1,944,967	-				-1.1
1,944,976	-				+0.4
1,944,978	+				+0.6
1,945,029	+				-0.7
1,945,029	+				-1.0
1,945,030	-				+0.8
1,945,030	-				+0.5
1,945,032	-				+0.3
1,945,032	-				-0.1
1,945,032	-				-0.7
1,945,047	+				-1.0
1,945,047	+				-0.9
1,945,047	+				+0.2
1,945,047	+				+0.6
1,945,047	+				-2.6
1,945,047	+				-1.3
1,945,047	+				+1.7
1,945,047	+				-0.5
1,945,047	+				+0.2
1,945,048	-				-1.3
1,945,048	-				-0.1
1,945,048	-				-1.5
1,945,048	-				-0.1
1,945,049	+				-1.1
1,945,050	-				+0.2
1,945,050	-				-0.4
1,945,050	-				+0.4
1,945,050	-				-0.3
1,945,065	+				-1.3
1,945,065	+				-0.7
1,945,065	+				+0.5
1,945,065	+				-0.3
1,945,065	+				+0.4
1,945,066	-				-0.3
1,945,066	-				-0.7
1,945,066	-				+0.4
1,945,066	-				+0.5
1,945,066	-				-0.2
1,945,066	-				-0.3
1,945,066	-				+0.0
1,945,066	-				-1.1
1,945,066	-				-0.3
1,945,066	-				+0.5
1,945,069	+				+1.5
1,945,069	+				+0.3
1,945,069	+				-1.2
1,945,069	+				-1.0
1,945,070	-				+0.3
1,945,070	-				-0.9
1,945,070	-				+1.5
1,945,070	-				-0.3
1,945,070	-				-0.7
1,945,083	+				+0.6
1,945,083	+				-1.1
1,945,083	+				+0.9
1,945,083	+				+0.3
1,945,084	-				-0.0
1,945,084	-				+0.2
1,945,084	-				+0.0
1,945,084	-				-0.7
1,945,084	-				+1.5
1,945,084	-				+0.2
1,945,087	+				+0.2
1,945,087	+				-1.6
1,945,088	-				-0.9
1,945,088	-				+0.1
1,945,088	-				-0.0
1,945,328	-				+0.3
1,945,352	-				+0.0
1,945,354	+				+0.0
1,945,388	-				+0.2
1,945,388	-				-0.9
1,945,392	-				-2.1
1,945,392	-				-1.7
1,945,400	+				+0.1
1,945,431	+				+0.4
1,945,432	-				-0.2
1,945,432	-				-0.3
1,945,432	-				-0.9
1,945,517	+		DZA65_RS09215	0.16	-0.9
1,945,517	+		DZA65_RS09215	0.16	-1.7
1,945,517	+		DZA65_RS09215	0.16	-0.9
1,945,517	+		DZA65_RS09215	0.16	+1.2
1,945,517	+		DZA65_RS09215	0.16	-0.5
1,945,517	+		DZA65_RS09215	0.16	-0.2
1,945,517	+		DZA65_RS09215	0.16	+0.7
1,945,517	+		DZA65_RS09215	0.16	-2.4
1,945,517	+		DZA65_RS09215	0.16	+0.4
1,945,518	-		DZA65_RS09215	0.16	-0.2
1,945,518	-		DZA65_RS09215	0.16	-0.6
1,945,518	-		DZA65_RS09215	0.16	-2.5
1,945,585	+		DZA65_RS09215	0.29	+0.1
1,945,586	-		DZA65_RS09215	0.29	-1.8
1,945,634	-		DZA65_RS09215	0.39	-0.3
1,945,634	-		DZA65_RS09215	0.39	+0.9
1,945,634	-		DZA65_RS09215	0.39	-0.6
1,945,634	-		DZA65_RS09215	0.39	-0.5
1,945,666	+		DZA65_RS09215	0.45	-0.4
1,945,666	+		DZA65_RS09215	0.45	-0.7
1,945,667	-		DZA65_RS09215	0.45	-0.6
1,945,681	+		DZA65_RS09215	0.48	+0.0
1,945,681	+		DZA65_RS09215	0.48	-0.5
1,945,682	-		DZA65_RS09215	0.48	-0.5
1,945,684	+		DZA65_RS09215	0.49	+0.5
1,945,684	+		DZA65_RS09215	0.49	-0.1
1,945,685	-		DZA65_RS09215	0.49	-0.9
1,945,685	-		DZA65_RS09215	0.49	-0.6
1,945,685	-		DZA65_RS09215	0.49	-1.8
1,945,685	-		DZA65_RS09215	0.49	-0.8
1,945,735	+		DZA65_RS09215	0.58	-0.5
1,945,736	-		DZA65_RS09215	0.59	-0.1
1,945,761	+		DZA65_RS09215	0.64	+0.9
1,945,879	+		DZA65_RS09215	0.87	-0.3
1,945,932	-				+0.0
1,945,945	+				+0.0
1,945,946	-				+0.1
1,945,946	-				+1.2
1,945,946	-				+0.4
1,945,956	+				-1.1
1,945,957	-				-2.2
1,946,052	-				-1.0
1,946,120	+		DZA65_RS09220	0.20	+0.3
1,946,121	-		DZA65_RS09220	0.21	-0.1
1,946,124	+		DZA65_RS09220	0.21	-0.6
1,946,124	+		DZA65_RS09220	0.21	-0.5
1,946,124	+		DZA65_RS09220	0.21	+0.9
1,946,124	+		DZA65_RS09220	0.21	-2.0
1,946,124	+		DZA65_RS09220	0.21	-0.5
1,946,124	+		DZA65_RS09220	0.21	-1.2
1,946,124	+		DZA65_RS09220	0.21	-0.6
1,946,124	+		DZA65_RS09220	0.21	-0.1
1,946,124	+		DZA65_RS09220	0.21	-0.5
1,946,124	+		DZA65_RS09220	0.21	+0.1
1,946,124	+		DZA65_RS09220	0.21	+0.3
1,946,124	+		DZA65_RS09220	0.21	+0.5
1,946,125	-		DZA65_RS09220	0.21	+0.4
1,946,125	-		DZA65_RS09220	0.21	-0.9
1,946,125	-		DZA65_RS09220	0.21	-0.4
1,946,125	-		DZA65_RS09220	0.21	+0.4
1,946,125	-		DZA65_RS09220	0.21	-0.7
1,946,125	-		DZA65_RS09220	0.21	-0.2
1,946,284	+		DZA65_RS09220	0.54	+0.4
1,946,284	+		DZA65_RS09220	0.54	-0.2
1,946,284	+		DZA65_RS09220	0.54	+0.4
1,946,285	-		DZA65_RS09220	0.54	-0.1
1,946,285	-		DZA65_RS09220	0.54	+0.7
1,946,285	-		DZA65_RS09220	0.54	+0.0
1,946,285	-		DZA65_RS09220	0.54	-1.0
1,946,285	-		DZA65_RS09220	0.54	+0.2
1,946,285	-		DZA65_RS09220	0.54	-0.5
1,946,285	-		DZA65_RS09220	0.54	-2.3
1,946,308	+		DZA65_RS09220	0.58	-0.6
1,946,309	-		DZA65_RS09220	0.59	+0.4
1,946,433	+		DZA65_RS09220	0.84	-1.7
1,946,434	-		DZA65_RS09220	0.84	+0.3
1,946,436	+		DZA65_RS09220	0.84	+0.0
1,946,436	+		DZA65_RS09220	0.84	-0.5
1,946,437	-		DZA65_RS09220	0.84	-0.1
1,946,437	-		DZA65_RS09220	0.84	+0.6
1,946,437	-		DZA65_RS09220	0.84	+0.4
1,946,437	-		DZA65_RS09220	0.84	-1.6
1,946,488	+				-0.7
1,946,488	+				-0.6
1,946,489	-				-0.2
1,946,489	-				+0.4
1,946,513	+				-0.3
1,946,514	-				-0.2
1,946,514	-				-0.1
1,946,514	-				-0.7
1,946,514	-				-1.0
1,946,514	-				-0.7
1,946,517	+				-1.9
1,946,517	+				+0.5
1,946,517	+				-0.2
1,946,517	+				+0.1
1,946,518	-				-0.1
1,946,518	-				-0.5
1,946,518	-				-0.6
1,946,519	+				-1.2
1,946,519	+				+0.9
1,946,519	+				+0.2
1,946,520	-				-0.9
1,946,531	+				-0.1
1,946,531	+				+0.0
1,946,531	+				-0.6
1,946,531	+				+0.1
1,946,531	+				-1.1
1,946,531	+				+0.9
1,946,532	-				+0.1
1,946,532	-				-0.1
1,946,532	-				-0.8
1,946,532	-				-0.4
1,946,535	+				-0.2
1,946,536	-				-0.5
1,946,536	-				+0.2
1,946,536	-				+0.0
1,946,536	-				-0.0
1,946,538	-				+0.3
1,946,543	-				-0.4
1,946,553	+				+0.7
1,946,574	-				-2.0
1,946,574	-				+0.6
1,946,574	-				+0.5
1,946,574	-				-0.5
1,946,579	-				-0.6
1,946,616	+				-0.6
1,946,616	+				+0.6
1,946,616	+				+2.1
1,946,616	+				-0.4
1,946,616	+				-1.1
1,946,616	+				-0.1
1,946,616	+				-1.5
1,946,617	-				-0.0
1,946,618	+				-0.8
1,946,618	+				-0.5
1,946,619	-				-0.3
1,946,619	-				+0.5
1,946,619	-				-0.1
1,946,619	-				-0.2
1,946,628	+				-0.1
1,946,628	+				-0.6
1,946,628	+				-0.8
1,946,628	+				-1.1
1,946,628	+				+0.4
1,946,628	+				+0.5
1,946,628	+				-0.9
1,946,628	+				-0.9
1,946,628	+				+0.3
1,946,628	+				-0.5
1,946,629	-				-1.9
1,946,629	-				-0.3
1,946,629	-				-0.8
1,946,629	-				-0.6
1,946,629	-				+0.5
1,946,629	-				+0.5
1,946,629	-				-0.7
1,946,635	+				-0.4
1,946,635	+				-0.2
1,946,635	+				+0.4
1,946,671	-				+0.5
1,946,673	+				+0.6
1,946,674	-				+0.2
1,946,674	-				+0.2
1,946,721	-				+0.1
1,946,824	+		DZA65_RS09225	0.16	+0.0
1,946,824	+		DZA65_RS09225	0.16	-0.4
1,946,824	+		DZA65_RS09225	0.16	-0.0
1,946,824	+		DZA65_RS09225	0.16	-0.1
1,946,824	+		DZA65_RS09225	0.16	-0.4
1,946,825	-		DZA65_RS09225	0.17	+0.0
1,946,825	-		DZA65_RS09225	0.17	+0.7
1,946,858	-		DZA65_RS09225	0.19	-0.5
1,946,858	-		DZA65_RS09225	0.19	+1.6
1,946,873	+		DZA65_RS09225	0.21	+0.2
1,946,873	+		DZA65_RS09225	0.21	-1.8
1,946,873	+		DZA65_RS09225	0.21	-0.3
1,946,873	+		DZA65_RS09225	0.21	-2.2
1,946,873	+		DZA65_RS09225	0.21	+0.0
1,946,873	+		DZA65_RS09225	0.21	-0.7
1,946,873	+		DZA65_RS09225	0.21	-1.1
1,946,874	-		DZA65_RS09225	0.21	+0.4
1,946,874	-		DZA65_RS09225	0.21	-0.9
1,946,874	-		DZA65_RS09225	0.21	+0.6
1,946,874	-		DZA65_RS09225	0.21	-0.4
1,946,877	+		DZA65_RS09225	0.21	+1.1
1,946,877	+		DZA65_RS09225	0.21	-0.0
1,946,877	+		DZA65_RS09225	0.21	-0.3
1,946,877	+		DZA65_RS09225	0.21	+0.1
1,946,878	-				+0.1
1,946,878	-		DZA65_RS09225	0.21	-1.2
1,946,878	-		DZA65_RS09225	0.21	+0.1
1,946,878	-		DZA65_RS09225	0.21	+0.0
1,946,878	-		DZA65_RS09225	0.21	+0.8
1,946,878	-		DZA65_RS09225	0.21	-0.1
1,946,878	-		DZA65_RS09225	0.21	-0.5
1,946,878	-		DZA65_RS09225	0.21	-0.3
1,946,878	-		DZA65_RS09225	0.21	-1.3
1,946,878	-		DZA65_RS09225	0.21	-1.5
1,946,878	-		DZA65_RS09225	0.21	-0.5
1,946,878	-		DZA65_RS09225	0.21	-0.5
1,946,878	-		DZA65_RS09225	0.21	-0.0
1,946,937	-		DZA65_RS09225	0.26	+0.5