Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS08535

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,800,658	-		DZA65_RS08530	0.47	-0.3
1,800,658	-		DZA65_RS08530	0.47	+1.0
1,800,665	+		DZA65_RS08530	0.47	+1.1
1,800,665	+		DZA65_RS08530	0.47	+0.2
1,800,665	+		DZA65_RS08530	0.47	-1.2
1,800,665	+		DZA65_RS08530	0.47	-0.3
1,800,666	-		DZA65_RS08530	0.47	+0.8
1,800,666	-		DZA65_RS08530	0.47	-0.2
1,800,666	-		DZA65_RS08530	0.47	+1.3
1,800,666	-		DZA65_RS08530	0.47	-1.7
1,800,666	-		DZA65_RS08530	0.47	-0.6
1,800,666	-		DZA65_RS08530	0.47	+0.2
1,800,666	-		DZA65_RS08530	0.47	+0.1
1,800,666	-		DZA65_RS08530	0.47	+0.5
1,800,668	+		DZA65_RS08530	0.47	+2.1
1,800,668	+		DZA65_RS08530	0.47	+0.9
1,800,668	+		DZA65_RS08530	0.47	-0.8
1,800,669	-		DZA65_RS08530	0.48	-0.3
1,800,669	-		DZA65_RS08530	0.48	-0.3
1,800,669	-		DZA65_RS08530	0.48	+0.6
1,800,669	-		DZA65_RS08530	0.48	+0.3
1,800,669	-		DZA65_RS08530	0.48	-0.1
1,800,684	+		DZA65_RS08530	0.49	-0.1
1,800,684	+		DZA65_RS08530	0.49	-0.6
1,800,684	+		DZA65_RS08530	0.49	+0.3
1,800,685	-		DZA65_RS08530	0.49	-0.7
1,800,685	-		DZA65_RS08530	0.49	-0.4
1,800,687	+		DZA65_RS08530	0.49	+0.1
1,800,687	+		DZA65_RS08530	0.49	-0.1
1,800,688	-		DZA65_RS08530	0.49	+0.5
1,800,700	+		DZA65_RS08530	0.50	+0.4
1,800,700	+		DZA65_RS08530	0.50	-0.0
1,800,700	+		DZA65_RS08530	0.50	+0.5
1,800,700	+		DZA65_RS08530	0.50	-0.3
1,800,700	+		DZA65_RS08530	0.50	-0.4
1,800,700	+				-0.9
1,800,700	+		DZA65_RS08530	0.50	-1.4
1,800,701	-		DZA65_RS08530	0.50	-0.8
1,800,721	+		DZA65_RS08530	0.51	+0.2
1,800,722	-		DZA65_RS08530	0.51	-1.2
1,800,722	-		DZA65_RS08530	0.51	-1.8
1,800,829	-		DZA65_RS08530	0.59	+0.3
1,800,875	+		DZA65_RS08530	0.62	-1.0
1,800,899	+		DZA65_RS08530	0.64	-0.0
1,800,899	+		DZA65_RS08530	0.64	+0.1
1,800,899	+		DZA65_RS08530	0.64	+0.1
1,800,941	-		DZA65_RS08530	0.67	+0.2
1,800,941	-		DZA65_RS08530	0.67	-0.5
1,800,994	+		DZA65_RS08530	0.71	+0.0
1,800,994	+		DZA65_RS08530	0.71	+0.3
1,800,994	+		DZA65_RS08530	0.71	+0.0
1,800,994	+		DZA65_RS08530	0.71	+0.4
1,800,994	+		DZA65_RS08530	0.71	-0.3
1,800,995	-		DZA65_RS08530	0.71	-0.4
1,800,995	-		DZA65_RS08530	0.71	-0.4
1,800,995	-		DZA65_RS08530	0.71	-1.0
1,801,024	+		DZA65_RS08530	0.73	+0.6
1,801,030	+				-0.4
1,801,030	+		DZA65_RS08530	0.73	+0.6
1,801,038	+		DZA65_RS08530	0.74	-0.2
1,801,039	-		DZA65_RS08530	0.74	-0.3
1,801,039	-		DZA65_RS08530	0.74	+0.9
1,801,061	+		DZA65_RS08530	0.75	-1.6
1,801,137	+		DZA65_RS08530	0.81	-0.0
1,801,138	-		DZA65_RS08530	0.81	-0.5
1,801,148	+		DZA65_RS08530	0.81	+0.3
1,801,148	+		DZA65_RS08530	0.81	+1.5
1,801,178	+		DZA65_RS08530	0.84	-0.7
1,801,178	+		DZA65_RS08530	0.84	-0.4
1,801,179	-		DZA65_RS08530	0.84	-0.4
1,801,179	-		DZA65_RS08530	0.84	+0.1
1,801,179	-		DZA65_RS08530	0.84	+0.9
1,801,219	-		DZA65_RS08530	0.87	+0.4
1,801,233	+		DZA65_RS08530	0.88	-0.0
1,801,233	+		DZA65_RS08530	0.88	-0.7
1,801,234	-		DZA65_RS08530	0.88	-1.5
1,801,234	-		DZA65_RS08530	0.88	-1.1
1,801,234	-		DZA65_RS08530	0.88	-0.5
1,801,280	+				+1.7
1,801,280	+				+0.4
1,801,280	+				-1.0
1,801,281	-				-1.0
1,801,311	+				+0.4
1,801,311	+				-0.3
1,801,312	-				-0.4
1,801,312	-				+1.5
1,801,330	+				+0.9
1,801,331	-				+0.3
1,801,331	-				-1.9
1,801,331	-				-0.9
1,801,331	-				-0.3
1,801,331	-				-2.1
1,801,331	-				+1.2
1,801,331	-				+0.6
1,801,334	+				-0.2
1,801,334	+				-0.7
1,801,334	+				-0.1
1,801,334	+				-1.2
1,801,335	-				-0.6
1,801,365	+				-0.1
1,801,411	+				-0.5
1,801,411	+				+0.2
1,801,411	+				-0.6
1,801,412	-				+1.5
1,801,412	-				+0.9
1,801,444	+				-0.4
1,801,445	-				+0.9
1,801,445	-				-1.8
1,801,445	-				-0.1
1,801,484	+				+1.4
1,801,485	-				-0.9
1,801,491	-				-0.1
1,801,532	+				-0.1
1,801,667	+		DZA65_RS08535	0.28	-1.1
1,801,667	+		DZA65_RS08535	0.28	+0.0
1,801,716	+				-1.9
1,801,727	-		DZA65_RS08535	0.51	-1.0
1,801,742	+		DZA65_RS08535	0.57	-0.4
1,801,763	+		DZA65_RS08535	0.65	-0.7
1,801,764	-		DZA65_RS08535	0.65	+1.6
1,801,764	-		DZA65_RS08535	0.65	-0.4
1,801,847	+				+0.2
1,801,851	+				+0.0
1,801,852	-				+0.8
1,801,852	-				+0.6
1,801,852	-				-0.0
1,801,852	-				+0.5
1,801,879	+				-0.7
1,801,904	+				-1.1
1,801,982	+				+0.4
1,801,982	+				-0.2
1,802,083	+				-0.8
1,802,126	-				-0.9
1,802,171	+				+1.4
1,802,178	+				-2.1
1,802,289	+				-0.3
1,802,289	+				+0.3
1,802,289	+				+0.1
1,802,289	+				+0.6
1,802,290	-				-0.7
1,802,397	+				-0.1
1,802,425	+				+0.7
1,802,426	-				+0.9
1,802,431	+				+0.6
1,802,455	+				-0.3
1,802,456	-				-0.4
1,802,456	-				+0.4
1,802,475	-				-0.6
1,802,475	-				-0.7
1,802,556	+				+0.2
1,802,557	-				+0.4
1,802,567	+				+0.2
1,802,702	+				+0.7
1,802,713	+				-0.4
1,802,713	+				-1.4
1,802,714	-				+0.1
1,802,714	-				+0.5
1,802,718	+				-1.0
1,802,718	+				+0.6
1,802,718	+				-0.5
1,802,719	-				-0.4
1,802,807	+				+0.6
1,802,808	-				-2.4
1,802,816	-				-1.4
1,802,823	+				+0.7