Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07175

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,490,866	+		DZA65_RS07170	0.55	-0.7
1,491,021	+		DZA65_RS07170	0.72	+0.0
1,491,022	-		DZA65_RS07170	0.72	-1.0
1,491,022	-		DZA65_RS07170	0.72	-0.6
1,491,022	-		DZA65_RS07170	0.72	+0.0
1,491,022	-		DZA65_RS07170	0.72	-2.2
1,491,113	+		DZA65_RS07170	0.82	-0.2
1,491,173	+		DZA65_RS07170	0.89	-0.2
1,491,173	+		DZA65_RS07170	0.89	+0.0
1,491,173	+		DZA65_RS07170	0.89	+0.8
1,491,174	-		DZA65_RS07170	0.89	+1.0
1,491,174	-		DZA65_RS07170	0.89	+0.0
1,491,174	-		DZA65_RS07170	0.89	-0.0
1,491,174	-		DZA65_RS07170	0.89	-1.1
1,491,174	-		DZA65_RS07170	0.89	+0.2
1,491,174	-		DZA65_RS07170	0.89	+0.8
1,491,174	-		DZA65_RS07170	0.89	-0.1
1,491,183	+				+0.2
1,491,183	+				-0.2
1,491,183	+				-0.3
1,491,183	+				+0.4
1,491,184	-				+0.1
1,491,215	+				-2.0
1,491,216	-				-2.3
1,491,270	+				-0.2
1,491,327	+				-0.4
1,491,328	-				-0.7
1,491,328	-				+0.5
1,491,355	+				+0.3
1,491,359	+				-0.2
1,491,360	-				-0.6
1,491,371	+				+0.6
1,491,371	+				+0.7
1,491,374	+				-0.3
1,491,375	-				-1.3
1,491,375	-				+0.8
1,491,375	-				-0.9
1,491,377	-				-0.3
1,491,444	+				-1.5
1,491,444	+				-0.1
1,491,445	-				+0.0
1,491,445	-				+1.3
1,491,454	+				-0.6
1,491,455	-				-0.3
1,491,455	-				-0.1
1,491,460	+				-2.2
1,491,460	+				-0.1
1,491,461	-				-1.5
1,491,461	-				+0.4
1,491,461	-				+0.4
1,491,478	+				+0.7
1,491,478	+				-0.2
1,491,561	-				+0.0
1,491,720	+		DZA65_RS07175	0.17	-0.2
1,491,721	-		DZA65_RS07175	0.17	-2.0
1,491,733	+				+1.0
1,491,733	+		DZA65_RS07175	0.18	-1.3
1,491,733	+		DZA65_RS07175	0.18	-0.7
1,491,733	+		DZA65_RS07175	0.18	+0.5
1,491,775	-		DZA65_RS07175	0.23	-0.4
1,491,880	+		DZA65_RS07175	0.35	-0.1
1,491,880	+		DZA65_RS07175	0.35	-1.0
1,491,884	+		DZA65_RS07175	0.35	+0.1
1,491,884	+		DZA65_RS07175	0.35	-1.0
1,491,885	-		DZA65_RS07175	0.35	-1.8
1,491,885	-		DZA65_RS07175	0.35	-1.8
1,491,885	-		DZA65_RS07175	0.35	+0.4
1,492,041	+		DZA65_RS07175	0.53	+0.2
1,492,072	+		DZA65_RS07175	0.57	+0.6
1,492,072	+		DZA65_RS07175	0.57	+1.0
1,492,072	+		DZA65_RS07175	0.57	-2.5
1,492,073	-		DZA65_RS07175	0.57	-0.4
1,492,094	-		DZA65_RS07175	0.59	+0.2
1,492,134	+		DZA65_RS07175	0.64	-1.2
1,492,135	-		DZA65_RS07175	0.64	-0.8
1,492,164	+		DZA65_RS07175	0.67	+0.7
1,492,164	+		DZA65_RS07175	0.67	+0.4
1,492,164	+		DZA65_RS07175	0.67	-1.8
1,492,164	+		DZA65_RS07175	0.67	-0.4
1,492,164	+		DZA65_RS07175	0.67	+0.2
1,492,164	+		DZA65_RS07175	0.67	-0.6
1,492,165	-		DZA65_RS07175	0.67	-0.5
1,492,165	-		DZA65_RS07175	0.67	+0.3
1,492,165	-		DZA65_RS07175	0.67	-0.8
1,492,165	-		DZA65_RS07175	0.67	-1.2
1,492,165	-		DZA65_RS07175	0.67	+0.7
1,492,165	-		DZA65_RS07175	0.67	-1.8
1,492,215	+		DZA65_RS07175	0.73	+0.4
1,492,216	-		DZA65_RS07175	0.73	+0.1
1,492,268	+		DZA65_RS07175	0.79	-0.1
1,492,268	+				+2.3
1,492,268	+		DZA65_RS07175	0.79	-0.5
1,492,288	+		DZA65_RS07175	0.81	-0.5
1,492,338	-		DZA65_RS07175	0.87	-1.0
1,492,338	-		DZA65_RS07175	0.87	-0.1
1,492,338	-		DZA65_RS07175	0.87	+0.1
1,492,467	+				-0.3
1,492,467	+				+0.0
1,492,467	+				+0.5
1,492,467	+				-2.5
1,492,467	+				+0.3
1,492,467	+				+0.7
1,492,468	-				-0.1
1,492,468	-				-0.6
1,492,468	-				-0.9
1,492,468	-				+0.0
1,492,468	-				-1.8
1,492,468	-				+0.5
1,492,468	-				-0.2
1,492,469	+				-0.3
1,492,470	-				-1.6
1,492,485	+				+0.7
1,492,615	+				-0.7
1,492,616	-				-1.0
1,492,669	-				-0.6
1,492,718	-				-0.8
1,492,719	+				-0.3
1,492,801	+		DZA65_RS07180	0.12	-0.6
1,492,801	+		DZA65_RS07180	0.12	-1.4
1,492,801	+		DZA65_RS07180	0.12	-2.2
1,492,802	-		DZA65_RS07180	0.12	+0.2
1,492,845	+		DZA65_RS07180	0.15	-0.6
1,492,888	-		DZA65_RS07180	0.18	+0.4
1,492,951	+		DZA65_RS07180	0.22	-0.3
1,492,951	+		DZA65_RS07180	0.22	+1.0
1,492,951	+		DZA65_RS07180	0.22	-0.4
1,492,952	-		DZA65_RS07180	0.22	+0.4
1,492,952	-		DZA65_RS07180	0.22	-1.8
1,492,952	-		DZA65_RS07180	0.22	-0.4
1,492,952	-		DZA65_RS07180	0.22	-1.6
1,492,952	-		DZA65_RS07180	0.22	-0.2
1,492,954	-		DZA65_RS07180	0.22	-1.3
1,493,058	+		DZA65_RS07180	0.30	+0.2
1,493,083	+		DZA65_RS07180	0.32	-1.0
1,493,084	-		DZA65_RS07180	0.32	+0.6
1,493,149	+		DZA65_RS07180	0.36	-0.7
1,493,149	+		DZA65_RS07180	0.36	+0.4
1,493,149	+		DZA65_RS07180	0.36	-1.8
1,493,150	-		DZA65_RS07180	0.36	-0.4
1,493,150	-				+1.0
1,493,150	-		DZA65_RS07180	0.36	-0.2
1,493,150	-		DZA65_RS07180	0.36	-2.0
1,493,150	-		DZA65_RS07180	0.36	-0.3
1,493,150	-		DZA65_RS07180	0.36	-0.6
1,493,150	-		DZA65_RS07180	0.36	+0.0
1,493,176	+				+0.3
1,493,180	+		DZA65_RS07180	0.38	+0.0
1,493,181	-		DZA65_RS07180	0.39	+0.2
1,493,236	+		DZA65_RS07180	0.42	-0.3
1,493,236	+		DZA65_RS07180	0.42	+1.0
1,493,373	+		DZA65_RS07180	0.52	-0.6
1,493,373	+		DZA65_RS07180	0.52	-0.4
1,493,377	+		DZA65_RS07180	0.52	+0.0
1,493,377	+		DZA65_RS07180	0.52	-1.3
1,493,378	-		DZA65_RS07180	0.53	-2.3