Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS07120

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,477,819	+				-1.3
1,477,819	+				+1.0
1,477,820	-				-0.2
1,477,820	-				+1.3
1,477,864	+				-0.5
1,477,864	+				+0.3
1,477,864	+				+0.3
1,477,865	-				+0.0
1,477,865	-				-0.5
1,477,880	+				-0.2
1,477,880	+				-0.6
1,477,881	-				-0.2
1,477,894	+				-2.2
1,477,895	-				+0.7
1,477,935	+				+0.7
1,477,935	+				+0.0
1,477,935	+				-0.4
1,477,935	+				+0.2
1,477,935	+				+0.3
1,478,007	-				-0.1
1,478,024	+		DZA65_RS07115	0.12	-0.2
1,478,024	+		DZA65_RS07115	0.12	-0.3
1,478,024	+		DZA65_RS07115	0.12	+0.3
1,478,024	+		DZA65_RS07115	0.12	+0.7
1,478,024	+		DZA65_RS07115	0.12	-0.4
1,478,024	+		DZA65_RS07115	0.12	+0.3
1,478,025	-		DZA65_RS07115	0.12	+0.7
1,478,025	-		DZA65_RS07115	0.12	-0.1
1,478,025	-		DZA65_RS07115	0.12	+0.4
1,478,025	-		DZA65_RS07115	0.12	+0.0
1,478,025	-		DZA65_RS07115	0.12	-0.2
1,478,025	-		DZA65_RS07115	0.12	-1.4
1,478,210	-		DZA65_RS07115	0.33	-0.2
1,478,441	+		DZA65_RS07115	0.60	-0.1
1,478,441	+		DZA65_RS07115	0.60	+0.0
1,478,441	+		DZA65_RS07115	0.60	+0.0
1,478,441	+		DZA65_RS07115	0.60	-0.6
1,478,447	+		DZA65_RS07115	0.60	+0.3
1,478,448	-		DZA65_RS07115	0.60	-0.1
1,478,448	-		DZA65_RS07115	0.60	-0.4
1,478,531	+		DZA65_RS07115	0.70	+0.4
1,478,531	+		DZA65_RS07115	0.70	+0.5
1,478,531	+		DZA65_RS07115	0.70	+1.3
1,478,762	+				-0.4
1,478,779	+				-0.0
1,478,781	+				+0.0
1,478,781	+				-0.4
1,478,781	+				+0.7
1,478,781	+				+1.7
1,478,781	+				-0.7
1,478,792	+				-0.4
1,478,807	+				+0.7
1,478,807	+				+0.0
1,479,072	+		DZA65_RS07120	0.52	-0.5
1,479,073	-		DZA65_RS07120	0.52	-0.4
1,479,092	-		DZA65_RS07120	0.56	-1.0
1,479,201	+		DZA65_RS07120	0.76	-0.4
1,479,402	+				+1.0
1,479,402	+				+0.8
1,479,402	+				+0.1
1,479,403	-				+1.3
1,479,403	-				+0.3
1,479,403	-				+0.4
1,479,430	+		DZA65_RS07125	0.12	+0.2
1,479,450	+		DZA65_RS07125	0.15	-2.6
1,479,450	+		DZA65_RS07125	0.15	+1.5
1,479,450	+		DZA65_RS07125	0.15	-0.3
1,479,450	+		DZA65_RS07125	0.15	-1.6
1,479,450	+		DZA65_RS07125	0.15	+0.8
1,479,451	-				-1.3
1,479,451	-		DZA65_RS07125	0.15	+0.1
1,479,503	+		DZA65_RS07125	0.21	+0.4
1,479,504	-		DZA65_RS07125	0.21	+0.3
1,479,612	+		DZA65_RS07125	0.33	+0.0
1,479,612	+		DZA65_RS07125	0.33	-0.3
1,479,612	+		DZA65_RS07125	0.33	+0.9
1,479,612	+		DZA65_RS07125	0.33	-0.3
1,479,612	+		DZA65_RS07125	0.33	-0.8
1,479,612	+		DZA65_RS07125	0.33	-0.7
1,479,612	+		DZA65_RS07125	0.33	-0.2
1,479,612	+		DZA65_RS07125	0.33	+1.3
1,479,613	-		DZA65_RS07125	0.34	+1.0
1,479,613	-		DZA65_RS07125	0.34	-0.2
1,479,613	-		DZA65_RS07125	0.34	-0.4
1,479,613	-		DZA65_RS07125	0.34	+0.2
1,479,629	+		DZA65_RS07125	0.35	+0.5
1,479,629	+		DZA65_RS07125	0.35	+0.5
1,479,629	+		DZA65_RS07125	0.35	-0.4
1,479,629	+		DZA65_RS07125	0.35	-0.8
1,479,629	+		DZA65_RS07125	0.35	+0.3
1,479,630	-		DZA65_RS07125	0.36	-0.6
1,479,630	-		DZA65_RS07125	0.36	+0.0
1,479,630	-		DZA65_RS07125	0.36	-1.1
1,479,659	+		DZA65_RS07125	0.39	-2.0
1,479,659	+		DZA65_RS07125	0.39	+0.4
1,479,695	+		DZA65_RS07125	0.43	-0.6
1,479,695	+		DZA65_RS07125	0.43	-1.2
1,479,695	+		DZA65_RS07125	0.43	+1.2
1,479,754	+		DZA65_RS07125	0.50	-0.2
1,479,754	+				+1.0
1,479,764	-		DZA65_RS07125	0.51	+0.3
1,479,794	-		DZA65_RS07125	0.55	-0.0
1,479,849	+		DZA65_RS07125	0.61	-0.7
1,479,849	+		DZA65_RS07125	0.61	-0.3
1,479,850	-		DZA65_RS07125	0.61	-0.5
1,479,902	-		DZA65_RS07125	0.67	+0.4
1,479,918	+		DZA65_RS07125	0.69	-0.2
1,479,919	-		DZA65_RS07125	0.69	-0.2
1,479,919	-		DZA65_RS07125	0.69	-1.2
1,479,938	+		DZA65_RS07125	0.72	+0.2
1,479,938	+		DZA65_RS07125	0.72	-0.9
1,479,938	+		DZA65_RS07125	0.72	+0.5
1,479,939	-		DZA65_RS07125	0.72	-2.2
1,479,956	-		DZA65_RS07125	0.74	+0.7
1,479,988	+		DZA65_RS07125	0.77	+0.6
1,479,988	+		DZA65_RS07125	0.77	+0.3
1,479,988	+		DZA65_RS07125	0.77	+1.0
1,479,989	-		DZA65_RS07125	0.78	+0.3
1,480,046	-		DZA65_RS07125	0.84	-1.8
1,480,067	-		DZA65_RS07125	0.87	+0.1
1,480,134	+				+0.2
1,480,135	-				-1.4
1,480,164	+				-0.7
1,480,165	-				+0.2
1,480,176	+				-0.6
1,480,202	+				+0.1
1,480,240	+				-1.3