Strain Fitness in Dickeya dianthicola ME23 around DZA65_RS06060

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,251,367	+		DZA65_RS06055	0.45	-0.1
1,251,367	+		DZA65_RS06055	0.45	-1.7
1,251,367	+		DZA65_RS06055	0.45	-1.5
1,251,381	-		DZA65_RS06055	0.46	-0.4
1,251,414	+		DZA65_RS06055	0.48	+0.3
1,251,414	+		DZA65_RS06055	0.48	-0.3
1,251,414	+		DZA65_RS06055	0.48	+0.7
1,251,414	+		DZA65_RS06055	0.48	-0.9
1,251,414	+		DZA65_RS06055	0.48	-0.7
1,251,414	+		DZA65_RS06055	0.48	-0.5
1,251,415	-		DZA65_RS06055	0.48	+0.2
1,251,415	-		DZA65_RS06055	0.48	+0.4
1,251,415	-		DZA65_RS06055	0.48	+0.4
1,251,415	-		DZA65_RS06055	0.48	-0.7
1,251,415	-		DZA65_RS06055	0.48	-0.7
1,251,415	-		DZA65_RS06055	0.48	+0.2
1,251,415	-		DZA65_RS06055	0.48	-0.3
1,251,415	-		DZA65_RS06055	0.48	-0.5
1,251,415	-		DZA65_RS06055	0.48	-0.7
1,251,461	+		DZA65_RS06055	0.51	-0.3
1,251,462	-		DZA65_RS06055	0.51	+1.5
1,251,462	-		DZA65_RS06055	0.51	+0.1
1,251,464	+		DZA65_RS06055	0.51	+0.5
1,251,465	-		DZA65_RS06055	0.51	+0.3
1,251,465	-		DZA65_RS06055	0.51	+0.4
1,251,465	-		DZA65_RS06055	0.51	-1.5
1,251,492	-		DZA65_RS06055	0.52	-1.7
1,251,498	-		DZA65_RS06055	0.53	+0.1
1,251,623	+		DZA65_RS06055	0.60	+0.3
1,251,623	+		DZA65_RS06055	0.60	+1.7
1,251,623	+		DZA65_RS06055	0.60	+0.1
1,251,623	+		DZA65_RS06055	0.60	-0.2
1,251,624	-		DZA65_RS06055	0.60	+0.3
1,251,624	-		DZA65_RS06055	0.60	-0.7
1,251,624	-		DZA65_RS06055	0.60	-0.3
1,251,624	-		DZA65_RS06055	0.60	-0.3
1,251,720	+		DZA65_RS06055	0.65	-0.6
1,251,720	+		DZA65_RS06055	0.65	+0.8
1,251,720	+		DZA65_RS06055	0.65	+1.7
1,251,750	+		DZA65_RS06055	0.67	+2.1
1,251,750	+		DZA65_RS06055	0.67	-0.9
1,251,750	+		DZA65_RS06055	0.67	+0.5
1,251,750	+		DZA65_RS06055	0.67	+0.6
1,251,750	+		DZA65_RS06055	0.67	+0.4
1,251,751	-		DZA65_RS06055	0.67	+1.7
1,251,751	-		DZA65_RS06055	0.67	+0.3
1,251,766	+		DZA65_RS06055	0.68	+0.1
1,251,766	+		DZA65_RS06055	0.68	-0.2
1,251,767	-		DZA65_RS06055	0.68	+0.0
1,251,767	-		DZA65_RS06055	0.68	-0.5
1,251,767	-		DZA65_RS06055	0.68	-0.5
1,251,767	-		DZA65_RS06055	0.68	-0.7
1,251,767	-		DZA65_RS06055	0.68	-2.5
1,251,767	-		DZA65_RS06055	0.68	+0.7
1,251,808	+		DZA65_RS06055	0.70	-0.3
1,251,809	-		DZA65_RS06055	0.70	-0.4
1,251,844	+		DZA65_RS06055	0.72	-2.6
1,251,848	+		DZA65_RS06055	0.72	+0.0
1,251,848	+		DZA65_RS06055	0.72	+1.7
1,251,854	+		DZA65_RS06055	0.73	-0.4
1,251,855	-		DZA65_RS06055	0.73	-0.3
1,251,855	-		DZA65_RS06055	0.73	+0.7
1,251,930	-		DZA65_RS06055	0.77	-1.1
1,251,930	-		DZA65_RS06055	0.77	+0.2
1,251,930	-		DZA65_RS06055	0.77	+0.1
1,251,930	-		DZA65_RS06055	0.77	+1.5
1,252,014	-		DZA65_RS06055	0.82	-1.3
1,252,014	-		DZA65_RS06055	0.82	-0.3
1,252,075	+		DZA65_RS06055	0.85	+1.7
1,252,075	+		DZA65_RS06055	0.85	+0.3
1,252,075	+		DZA65_RS06055	0.85	+0.7
1,252,075	+		DZA65_RS06055	0.85	-0.2
1,252,076	-		DZA65_RS06055	0.85	-0.3
1,252,076	-		DZA65_RS06055	0.85	+2.1
1,252,076	-		DZA65_RS06055	0.85	-0.6
1,252,265	+				+0.3
1,252,265	+				+0.3
1,252,266	-				+0.6
1,252,266	-				-1.3
1,252,269	+				-0.4
1,252,269	+				-0.2
1,252,269	+				+1.3
1,252,269	+				-0.2
1,252,269	+				+1.1
1,252,269	+				+0.3
1,252,269	+				-2.0
1,252,269	+				+0.3
1,252,269	+				-0.0
1,252,269	+				+0.1
1,252,269	+				-1.2
1,252,269	+				-0.5
1,252,270	-				-1.3
1,252,270	-				+0.3
1,252,270	-				+1.7
1,252,270	-				-0.3
1,252,270	-				+0.1
1,252,270	-				+0.4
1,252,270	-				-0.0
1,252,270	-				-0.9
1,252,270	-				+0.9
1,252,270	-				-0.7
1,252,297	+				-1.3
1,252,297	+				+0.1
1,252,297	+				+0.2
1,252,298	-				+1.4
1,252,298	-				-0.7
1,252,298	-				-0.9
1,252,298	-				+0.1
1,252,332	+				-0.8
1,252,333	-				-0.6
1,252,375	+				+2.1
1,252,375	+				-0.3
1,252,375	+				-0.5
1,252,468	+				-0.4
1,252,468	+				+0.6
1,252,468	+				-0.1
1,252,468	+				-2.1
1,252,468	+				-0.5
1,252,469	-				-0.7
1,252,469	-				+0.1
1,252,537	+		DZA65_RS06060	0.12	-1.3
1,252,537	+		DZA65_RS06060	0.12	+0.1
1,252,537	+		DZA65_RS06060	0.12	+0.7
1,252,538	-		DZA65_RS06060	0.12	+0.1
1,252,538	-		DZA65_RS06060	0.12	-1.3
1,252,538	-		DZA65_RS06060	0.12	-0.2
1,252,573	+		DZA65_RS06060	0.14	-2.7
1,252,573	+		DZA65_RS06060	0.14	-1.1
1,252,573	+		DZA65_RS06060	0.14	-1.1
1,252,573	+		DZA65_RS06060	0.14	+0.7
1,252,573	+		DZA65_RS06060	0.14	-0.2
1,252,573	+		DZA65_RS06060	0.14	-0.7
1,252,574	-		DZA65_RS06060	0.14	+0.1
1,252,574	-		DZA65_RS06060	0.14	+0.2
1,252,574	-		DZA65_RS06060	0.14	+0.1
1,252,574	-		DZA65_RS06060	0.14	-0.1
1,252,625	+		DZA65_RS06060	0.17	-0.4
1,252,625	+		DZA65_RS06060	0.17	-0.5
1,252,625	+		DZA65_RS06060	0.17	-0.0
1,252,625	+		DZA65_RS06060	0.17	-0.7
1,252,625	+		DZA65_RS06060	0.17	-0.6
1,252,625	+		DZA65_RS06060	0.17	+0.1
1,252,626	-		DZA65_RS06060	0.17	+0.7
1,252,626	-		DZA65_RS06060	0.17	-1.8
1,252,626	-		DZA65_RS06060	0.17	-0.4
1,252,626	-		DZA65_RS06060	0.17	+1.1
1,252,626	-		DZA65_RS06060	0.17	+0.4
1,252,626	-		DZA65_RS06060	0.17	+0.9
1,252,626	-		DZA65_RS06060	0.17	-0.5
1,252,626	-		DZA65_RS06060	0.17	+0.6
1,252,626	-		DZA65_RS06060	0.17	-0.9
1,252,626	-		DZA65_RS06060	0.17	+0.3
1,252,626	-		DZA65_RS06060	0.17	+0.8
1,252,629	+		DZA65_RS06060	0.17	-0.7
1,252,629	+		DZA65_RS06060	0.17	-1.3
1,252,629	+		DZA65_RS06060	0.17	+0.1
1,252,629	+		DZA65_RS06060	0.17	-0.5
1,252,630	-		DZA65_RS06060	0.17	-1.5
1,252,630	-		DZA65_RS06060	0.17	-0.7
1,252,630	-		DZA65_RS06060	0.17	+1.7
1,252,630	-		DZA65_RS06060	0.17	-3.3
1,252,630	-		DZA65_RS06060	0.17	-1.3
1,252,741	+		DZA65_RS06060	0.23	-1.3
1,252,741	+		DZA65_RS06060	0.23	-0.5
1,252,741	+		DZA65_RS06060	0.23	+1.1
1,252,741	+		DZA65_RS06060	0.23	+0.4
1,252,741	+		DZA65_RS06060	0.23	+0.2
1,252,741	+		DZA65_RS06060	0.23	-0.4
1,252,741	+		DZA65_RS06060	0.23	+0.2
1,252,741	+		DZA65_RS06060	0.23	-0.5
1,252,741	+		DZA65_RS06060	0.23	+1.4
1,252,741	+		DZA65_RS06060	0.23	-0.5
1,252,742	-		DZA65_RS06060	0.23	-0.0
1,252,742	-		DZA65_RS06060	0.23	-0.1
1,252,742	-		DZA65_RS06060	0.23	-1.3
1,252,742	-		DZA65_RS06060	0.23	-0.1
1,252,742	-		DZA65_RS06060	0.23	-0.9
1,252,742	-		DZA65_RS06060	0.23	-0.7
1,252,742	-		DZA65_RS06060	0.23	-1.1
1,252,742	-		DZA65_RS06060	0.23	+1.7
1,252,742	-		DZA65_RS06060	0.23	-0.6
1,252,742	-		DZA65_RS06060	0.23	-0.3
1,252,825	-		DZA65_RS06060	0.28	+0.9
1,252,825	-		DZA65_RS06060	0.28	+0.4
1,252,874	+		DZA65_RS06060	0.30	-0.7
1,252,875	-		DZA65_RS06060	0.31	-0.9
1,252,880	-		DZA65_RS06060	0.31	-0.4
1,252,880	-		DZA65_RS06060	0.31	-0.2
1,252,890	+		DZA65_RS06060	0.31	+1.4
1,252,890	+		DZA65_RS06060	0.31	-2.1
1,252,891	-		DZA65_RS06060	0.31	-1.4
1,252,891	-		DZA65_RS06060	0.31	-1.7
1,252,891	-		DZA65_RS06060	0.31	+0.1
1,252,891	-		DZA65_RS06060	0.31	+0.1
1,252,891	-		DZA65_RS06060	0.31	-2.1
1,252,891	-		DZA65_RS06060	0.31	+0.8
1,252,921	+		DZA65_RS06060	0.33	+0.1
1,252,921	+		DZA65_RS06060	0.33	+0.1
1,252,921	+		DZA65_RS06060	0.33	-0.9
1,252,921	+		DZA65_RS06060	0.33	+0.9
1,252,921	+				+0.1
1,252,922	-		DZA65_RS06060	0.33	+0.7
1,252,922	-		DZA65_RS06060	0.33	-1.1
1,252,922	-		DZA65_RS06060	0.33	-0.5
1,252,922	-		DZA65_RS06060	0.33	-0.4
1,252,922	-		DZA65_RS06060	0.33	-1.6
1,252,965	+		DZA65_RS06060	0.36	-2.5
1,252,966	-		DZA65_RS06060	0.36	+0.1
1,252,966	-		DZA65_RS06060	0.36	-0.9
1,252,966	-		DZA65_RS06060	0.36	-1.1
1,252,966	-		DZA65_RS06060	0.36	-1.4
1,252,966	-		DZA65_RS06060	0.36	+0.3
1,252,966	-		DZA65_RS06060	0.36	-0.4
1,252,966	-		DZA65_RS06060	0.36	-0.5
1,253,038	+		DZA65_RS06060	0.40	+0.1
1,253,038	+		DZA65_RS06060	0.40	+0.5
1,253,039	-		DZA65_RS06060	0.40	-0.5
1,253,039	-		DZA65_RS06060	0.40	-0.2
1,253,179	+		DZA65_RS06060	0.47	+2.2
1,253,179	+		DZA65_RS06060	0.47	+0.8
1,253,179	+		DZA65_RS06060	0.47	-0.6
1,253,179	+		DZA65_RS06060	0.47	-0.3
1,253,179	+		DZA65_RS06060	0.47	-1.5
1,253,179	+		DZA65_RS06060	0.47	-0.8
1,253,179	+		DZA65_RS06060	0.47	-1.5
1,253,179	+		DZA65_RS06060	0.47	-0.4
1,253,179	+		DZA65_RS06060	0.47	+0.1
1,253,179	+		DZA65_RS06060	0.47	+0.1
1,253,179	+		DZA65_RS06060	0.47	-1.0
1,253,179	+		DZA65_RS06060	0.47	-1.2
1,253,179	+		DZA65_RS06060	0.47	+1.7
1,253,180	-		DZA65_RS06060	0.48	-0.2
1,253,180	-		DZA65_RS06060	0.48	-0.4
1,253,180	-		DZA65_RS06060	0.48	+0.5
1,253,180	-		DZA65_RS06060	0.48	-2.3
1,253,180	-				+0.3
1,253,180	-		DZA65_RS06060	0.48	-0.4
1,253,180	-		DZA65_RS06060	0.48	+0.6
1,253,180	-		DZA65_RS06060	0.48	+0.2
1,253,194	+		DZA65_RS06060	0.48	-0.1
1,253,194	+		DZA65_RS06060	0.48	+0.1
1,253,194	+		DZA65_RS06060	0.48	+0.7
1,253,195	-		DZA65_RS06060	0.48	-0.9
1,253,195	-		DZA65_RS06060	0.48	-0.9
1,253,278	-		DZA65_RS06060	0.53	-0.8
1,253,278	-		DZA65_RS06060	0.53	-2.4
1,253,374	+		DZA65_RS06060	0.58	+0.6
1,253,375	-		DZA65_RS06060	0.58	-0.5
1,253,379	+		DZA65_RS06060	0.59	+0.1
1,253,379	+		DZA65_RS06060	0.59	-0.6
1,253,379	+		DZA65_RS06060	0.59	-0.2
1,253,379	+		DZA65_RS06060	0.59	+0.5
1,253,380	-		DZA65_RS06060	0.59	-2.3
1,253,380	-		DZA65_RS06060	0.59	-0.3
1,253,380	-		DZA65_RS06060	0.59	-2.1
1,253,469	+		DZA65_RS06060	0.64	-2.0
1,253,469	+		DZA65_RS06060	0.64	-1.5
1,253,469	+		DZA65_RS06060	0.64	-0.1
1,253,495	-		DZA65_RS06060	0.65	+0.5
1,253,497	+		DZA65_RS06060	0.65	-0.4
1,253,497	+		DZA65_RS06060	0.65	+0.6
1,253,497	+		DZA65_RS06060	0.65	+1.3
1,253,497	+		DZA65_RS06060	0.65	-0.8
1,253,497	+		DZA65_RS06060	0.65	-1.5
1,253,497	+		DZA65_RS06060	0.65	-1.5
1,253,497	+		DZA65_RS06060	0.65	+0.1
1,253,497	+		DZA65_RS06060	0.65	+0.5
1,253,497	+		DZA65_RS06060	0.65	-1.3
1,253,497	+		DZA65_RS06060	0.65	-0.7
1,253,497	+		DZA65_RS06060	0.65	-0.6
1,253,497	+		DZA65_RS06060	0.65	-0.8
1,253,497	+		DZA65_RS06060	0.65	+0.7
1,253,497	+		DZA65_RS06060	0.65	-0.2
1,253,497	+		DZA65_RS06060	0.65	+0.4
1,253,497	+		DZA65_RS06060	0.65	-0.7
1,253,497	+		DZA65_RS06060	0.65	-0.3
1,253,497	+		DZA65_RS06060	0.65	+1.7
1,253,497	+		DZA65_RS06060	0.65	-0.3
1,253,498	-		DZA65_RS06060	0.65	+0.9
1,253,498	-		DZA65_RS06060	0.65	-0.9
1,253,498	-		DZA65_RS06060	0.65	-0.8
1,253,498	-		DZA65_RS06060	0.65	-2.2
1,253,498	-		DZA65_RS06060	0.65	-1.1
1,253,498	-		DZA65_RS06060	0.65	+0.7
1,253,498	-		DZA65_RS06060	0.65	-1.3
1,253,498	-		DZA65_RS06060	0.65	-0.7
1,253,498	-		DZA65_RS06060	0.65	+0.6
1,253,498	-		DZA65_RS06060	0.65	+0.1
1,253,498	-		DZA65_RS06060	0.65	-0.7
1,253,498	-		DZA65_RS06060	0.65	+0.4
1,253,498	-		DZA65_RS06060	0.65	-0.5
1,253,498	-		DZA65_RS06060	0.65	-0.3
1,253,498	-		DZA65_RS06060	0.65	-0.7
1,253,498	-		DZA65_RS06060	0.65	-0.2
1,253,498	-		DZA65_RS06060	0.65	-0.8
1,253,498	-		DZA65_RS06060	0.65	-0.3
1,253,498	-		DZA65_RS06060	0.65	-1.0
1,253,576	+		DZA65_RS06060	0.70	-0.3
1,253,576	+		DZA65_RS06060	0.70	+0.6
1,253,576	+		DZA65_RS06060	0.70	+0.4
1,253,576	+		DZA65_RS06060	0.70	-0.2
1,253,576	+		DZA65_RS06060	0.70	-1.5
1,253,576	+		DZA65_RS06060	0.70	-1.5
1,253,576	+		DZA65_RS06060	0.70	+0.5
1,253,576	+		DZA65_RS06060	0.70	-0.6
1,253,576	+		DZA65_RS06060	0.70	+0.5
1,253,576	+		DZA65_RS06060	0.70	-0.1
1,253,576	+		DZA65_RS06060	0.70	+0.1
1,253,576	+		DZA65_RS06060	0.70	+0.3
1,253,576	+		DZA65_RS06060	0.70	-0.2
1,253,576	+		DZA65_RS06060	0.70	-1.2
1,253,576	+		DZA65_RS06060	0.70	+1.2
1,253,576	+		DZA65_RS06060	0.70	+0.9
1,253,577	-		DZA65_RS06060	0.70	+1.9
1,253,577	-		DZA65_RS06060	0.70	-0.3
1,253,577	-		DZA65_RS06060	0.70	+1.8
1,253,577	-				-0.3
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1,253,577	-		DZA65_RS06060	0.70	-1.7
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1,254,357	+				+1.1
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1,254,363	+				-1.9
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1,254,399	-				-2.2
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1,254,399	-				-1.7
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1,254,824	+				+1.5
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